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  5. Gb_19481

Gb_19481


Description : Proteasome subunit beta type-2-A OS=Arabidopsis thaliana (sp|o23714|psb2a_arath : 178.0)


Gene families : OG0003655 (Archaeplastida) Phylogenetic Tree(s): OG0003655_tree ,
OG_05_0004102 (LandPlants) Phylogenetic Tree(s): OG_05_0004102_tree ,
OG_06_0004916 (SeedPlants) Phylogenetic Tree(s): OG_06_0004916_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_19481
Cluster HCCA: Cluster_265

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00272080 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.20S core... 0.03 Archaeplastida
Cre14.g610950 No alias Protein degradation.26S proteasome.20S core... 0.03 Archaeplastida
MA_119122g0010 No alias Proteasome subunit beta type-2-B OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp4g04320.1 No alias component beta type-4 of 26S proteasome 0.02 Archaeplastida
Pp3c20_18180V3.1 No alias 20S proteasome beta subunit D1 0.03 Archaeplastida
Solyc09g082320.3.1 No alias component beta type-4 of 26S proteasome 0.02 Archaeplastida
Zm00001e012245_P001 No alias component beta type-4 of 26S proteasome 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006553 lysine metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008837 diaminopimelate epimerase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009085 lysine biosynthetic process IEP Neighborhood
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Neighborhood
BP GO:0009262 deoxyribonucleotide metabolic process IEP Neighborhood
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
BP GO:0016125 sterol metabolic process IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
CC GO:0032299 ribonuclease H2 complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0043648 dicarboxylic acid metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
BP GO:0046451 diaminopimelate metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0047661 amino-acid racemase activity IEP Neighborhood
MF GO:0047750 cholestenol delta-isomerase activity IEP Neighborhood
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 16 106
No external refs found!