- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28070.1); Has 3898 Blast hits to 1138 proteins in 179 species: Archae - 0; Bacteria - 40; Metazoa - 2353; Fungi - 242; Plants - 298; Viruses - 92; Other Eukaryotes - 873 (source: NCBI BLink).
Gene families : OG0001362 (Archaeplastida) Phylogenetic Tree(s): OG0001362_tree ,
OG_05_0000882 (LandPlants) Phylogenetic Tree(s): OG_05_0000882_tree ,
OG_06_0008020 (SeedPlants) Phylogenetic Tree(s): OG_06_0008020_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT2G33510 | |
| Cluster | HCCA: Cluster_28 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os02g31140.1 | No alias | CFL cutin and suberin biosynthesis regulator | 0.03 | Archaeplastida | |
| MA_104110g0010 | No alias | CFL cutin and suberin biosynthesis regulator | 0.03 | Archaeplastida | |
| Zm00001e039814_P001 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000723 | telomere maintenance | IEP | Neighborhood |
| CC | GO:0000795 | synaptonemal complex | IEP | Neighborhood |
| MF | GO:0003690 | double-stranded DNA binding | IEP | Neighborhood |
| MF | GO:0005102 | signaling receptor binding | IEP | Neighborhood |
| MF | GO:0005372 | water transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| CC | GO:0005615 | extracellular space | IEP | Neighborhood |
| CC | GO:0005694 | chromosome | IEP | Neighborhood |
| CC | GO:0005712 | chiasma | IEP | Neighborhood |
| BP | GO:0006298 | mismatch repair | IEP | Neighborhood |
| MF | GO:0008083 | growth factor activity | IEP | Neighborhood |
| BP | GO:0009690 | cytokinin metabolic process | IEP | Neighborhood |
| BP | GO:0009691 | cytokinin biosynthetic process | IEP | Neighborhood |
| BP | GO:0009734 | auxin-activated signaling pathway | IEP | Neighborhood |
| BP | GO:0010075 | regulation of meristem growth | IEP | Neighborhood |
| BP | GO:0010082 | regulation of root meristem growth | IEP | Neighborhood |
| MF | GO:0015171 | amino acid transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015250 | water channel activity | IEP | Neighborhood |
| MF | GO:0030545 | receptor regulator activity | IEP | Neighborhood |
| MF | GO:0030983 | mismatched DNA binding | IEP | Neighborhood |
| BP | GO:0032200 | telomere organization | IEP | Neighborhood |
| BP | GO:0032204 | regulation of telomere maintenance | IEP | Neighborhood |
| CC | GO:0032300 | mismatch repair complex | IEP | Neighborhood |
| CC | GO:0032390 | MutLbeta complex | IEP | Neighborhood |
| BP | GO:0032504 | multicellular organism reproduction | IEP | Neighborhood |
| MF | GO:0035064 | methylated histone binding | IEP | Neighborhood |
| BP | GO:0040008 | regulation of growth | IEP | Neighborhood |
| MF | GO:0042393 | histone binding | IEP | Neighborhood |
| BP | GO:0043247 | telomere maintenance in response to DNA damage | IEP | Neighborhood |
| CC | GO:0044421 | extracellular region part | IEP | Neighborhood |
| CC | GO:0044454 | nuclear chromosome part | IEP | Neighborhood |
| MF | GO:0048018 | receptor ligand activity | IEP | Neighborhood |
| BP | GO:0048364 | root development | IEP | Neighborhood |
| BP | GO:0048509 | regulation of meristem development | IEP | Neighborhood |
| BP | GO:0048513 | animal organ development | IEP | Neighborhood |
| BP | GO:0048527 | lateral root development | IEP | Neighborhood |
| BP | GO:0048528 | post-embryonic root development | IEP | Neighborhood |
| BP | GO:0048638 | regulation of developmental growth | IEP | Neighborhood |
| BP | GO:0050793 | regulation of developmental process | IEP | Neighborhood |
| BP | GO:0060249 | anatomical structure homeostasis | IEP | Neighborhood |
| BP | GO:0090696 | post-embryonic plant organ development | IEP | Neighborhood |
| CC | GO:0099086 | synaptonemal structure | IEP | Neighborhood |
| MF | GO:0140030 | modification-dependent protein binding | IEP | Neighborhood |
| MF | GO:0140034 | methylation-dependent protein binding | IEP | Neighborhood |
| CC | GO:1990391 | DNA repair complex | IEP | Neighborhood |
| BP | GO:2000280 | regulation of root development | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR012682 | Tscrpt_reg_Myc_N | 35 | 153 |
| No external refs found! |