Gb_19726


Description : 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana (sp|q84p21|4cll5_arath : 520.0)


Gene families : OG0000179 (Archaeplastida) Phylogenetic Tree(s): OG0000179_tree ,
OG_05_0000459 (LandPlants) Phylogenetic Tree(s): OG_05_0000459_tree ,
OG_06_0013672 (SeedPlants) Phylogenetic Tree(s): OG_06_0013672_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_19726
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00136980 evm_27.TU.AmTr_v1... 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00025p00217510 evm_27.TU.AmTr_v1... 4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00025p00217630 evm_27.TU.AmTr_v1... 4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00048p00141400 evm_27.TU.AmTr_v1... 4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00049p00100040 evm_27.TU.AmTr_v1... 4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AT1G20510 OPCL1 OPC-8:0 CoA ligase1 0.03 Archaeplastida
AT1G51680 4CL1, AT4CL1, 4CL.1 4-coumarate:CoA ligase 1 0.02 Archaeplastida
AT1G62940 ACOS5 acyl-CoA synthetase 5 0.06 Archaeplastida
AT5G38120 4CL8 AMP-dependent synthetase and ligase family protein 0.02 Archaeplastida
GSVIVT01010358001 No alias 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01010497001 No alias Cell wall.sporopollenin.synthesis.ACS5 acyl-CoA synthetase 0.05 Archaeplastida
GSVIVT01024400001 No alias 4-coumarate--CoA ligase 2 OS=Glycine max 0.04 Archaeplastida
GSVIVT01029182001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.05 Archaeplastida
Gb_41091 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 Archaeplastida
LOC_Os03g04000.1 No alias OPC-8:CoA synthetase 0.04 Archaeplastida
LOC_Os04g24530.1 No alias acyl-CoA synthetase (ACS5) 0.03 Archaeplastida
LOC_Os08g14760.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 Archaeplastida
LOC_Os08g34790.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 Archaeplastida
MA_109119g0010 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.05 Archaeplastida
MA_633407g0010 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 Archaeplastida
Mp1g05060.1 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp1g11670.1 No alias acyl-CoA synthetase (ACS5) 0.02 Archaeplastida
Pp3c13_8490V3.1 No alias AMP-dependent synthetase and ligase family protein 0.05 Archaeplastida
Pp3c18_6360V3.1 No alias 4-coumarate:CoA ligase 3 0.04 Archaeplastida
Smo123905 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.05 Archaeplastida
Smo177466 No alias 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc02g088710.3.1 No alias acyl-CoA synthetase (ACS5) 0.03 Archaeplastida
Solyc03g097030.3.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.07 Archaeplastida
Solyc03g111170.3.1 No alias 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc11g007970.2.1 No alias 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc12g094520.2.1 No alias OPC-8:CoA synthetase 0.02 Archaeplastida
Zm00001e002498_P003 No alias 4-coumarate--CoA ligase-like 3 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e008138_P001 No alias acyl-CoA synthetase (ACS5) 0.06 Archaeplastida
Zm00001e016374_P001 No alias acyl-CoA synthetase (ACS5) 0.04 Archaeplastida
Zm00001e023286_P002 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 493 568
IPR000873 AMP-dep_Synth/Lig 83 484
No external refs found!