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  5. Gb_19749

Gb_19749


Description : no description available(sp|a4pbq1|crj38_cryja : 110.0)


Gene families : OG0000084 (Archaeplastida) Phylogenetic Tree(s): OG0000084_tree ,
OG_05_0000662 (LandPlants) Phylogenetic Tree(s): OG_05_0000662_tree ,
OG_06_0000354 (SeedPlants) Phylogenetic Tree(s): OG_06_0000354_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_19749
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00164900 evm_27.TU.AmTr_v1... Thaumatin-like protein 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT4G36000 No alias Pathogenesis-related thaumatin superfamily protein 0.02 Archaeplastida
GSVIVT01019836001 No alias Thaumatin-like protein OS=Actinidia deliciosa 0.05 Archaeplastida
Gb_04191 No alias no description available(sp|q5dwg1|crj35_cryja : 318.0) 0.05 Archaeplastida
Gb_14848 No alias no description available(sp|q5dwg1|crj35_cryja : 241.0) 0.04 Archaeplastida
Gb_19746 No alias no description available(sp|q5dwg2|crj34_cryja : 239.0) 0.04 Archaeplastida
LOC_Os06g47600.1 No alias Thaumatin-like protein OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10433421g0010 No alias no description available(sp|q5dwg1|crj35_cryja : 200.0) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
InterPro domains Description Start Stop
IPR001938 Thaumatin 15 90
No external refs found!