Gb_19817


Description : subunit epsilon of coat protein complex


Gene families : OG0003402 (Archaeplastida) Phylogenetic Tree(s): OG0003402_tree ,
OG_05_0004233 (LandPlants) Phylogenetic Tree(s): OG_05_0004233_tree ,
OG_06_0004740 (SeedPlants) Phylogenetic Tree(s): OG_06_0004740_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_19817
Cluster HCCA: Cluster_315

Target Alias Description ECC score Gene Family Method Actions
AT1G30630 No alias Coatomer epsilon subunit 0.04 Archaeplastida
Cpa|evm.model.tig00000388.62 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 Archaeplastida
GSVIVT01021747001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 Archaeplastida
Gb_19818 No alias subunit epsilon of coat protein complex 0.02 Archaeplastida
LOC_Os04g52270.1 No alias subunit epsilon of coat protein complex 0.05 Archaeplastida
Pp3c16_16890V3.1 No alias Coatomer epsilon subunit 0.04 Archaeplastida
Pp3c6_18240V3.1 No alias Coatomer epsilon subunit 0.04 Archaeplastida
Solyc02g069585.1.1 No alias subunit epsilon of coat protein complex 0.08 Archaeplastida
Zm00001e041631_P001 No alias subunit epsilon of coat protein complex 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Neighborhood
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
BP GO:0006897 endocytosis IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007030 Golgi organization IEP Neighborhood
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Neighborhood
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016603 glutaminyl-peptide cyclotransferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018199 peptidyl-glutamine modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
BP GO:0098657 import into cell IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!