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Description : Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana (sp|q9sn39|pp320_arath : 484.0)
Gene families : OG0018718 (Archaeplastida) Phylogenetic Tree(s): OG0018718_tree ,
OG_05_0056572 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0049496 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_19896 | |
| Cluster | HCCA: Cluster_257 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| MA_12502g0010 | No alias | Pentatricopeptide repeat-containing protein At3g24000,... | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Neighborhood |
| MF | GO:0004527 | exonuclease activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| BP | GO:0006260 | DNA replication | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Neighborhood |
| MF | GO:0034061 | DNA polymerase activity | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 500 | 525 |
| IPR002885 | Pentatricopeptide_repeat | 233 | 257 |
| IPR002885 | Pentatricopeptide_repeat | 600 | 624 |
| IPR002885 | Pentatricopeptide_repeat | 205 | 230 |
| IPR002885 | Pentatricopeptide_repeat | 261 | 289 |
| IPR002885 | Pentatricopeptide_repeat | 391 | 421 |
| IPR002885 | Pentatricopeptide_repeat | 292 | 340 |
| IPR002885 | Pentatricopeptide_repeat | 425 | 472 |
| IPR002885 | Pentatricopeptide_repeat | 132 | 179 |
| IPR002885 | Pentatricopeptide_repeat | 526 | 574 |
| No external refs found! |