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Gb_20040


Description : omega-3/omega-6 fatty acid desaturase


Gene families : OG0001453 (Archaeplastida) Phylogenetic Tree(s): OG0001453_tree ,
OG_05_0001293 (LandPlants) Phylogenetic Tree(s): OG_05_0001293_tree ,
OG_06_0001157 (SeedPlants) Phylogenetic Tree(s): OG_06_0001157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20040
Cluster HCCA: Cluster_327

Target Alias Description ECC score Gene Family Method Actions
Cre01.g038600 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.03 Archaeplastida
GSVIVT01011171001 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.05 Archaeplastida
Mp3g17690.1 No alias omega-3/omega-6 fatty acid desaturase 0.02 Archaeplastida
Pp3c17_15490V3.1 No alias fatty acid desaturase 7 0.05 Archaeplastida
Solyc06g051400.3.1 No alias omega-3/omega-6 fatty acid desaturase 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR021863 FAS_N 1 149
IPR005804 FA_desaturase_dom 157 411
No external refs found!