Description : shuttle protein (RAD23)

Gene families : OG0001284 (Archaeplastida) Phylogenetic Tree(s): OG0001284_tree ,
OG_05_0001166 (LandPlants) Phylogenetic Tree(s): OG_05_0001166_tree ,
OG_06_0001263 (SeedPlants) Phylogenetic Tree(s): OG_06_0001263_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Gb_20110
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
AT5G38470 RAD23D Rad23 UV excision repair protein family 0.02 Archaeplastida
Pp3c10_8490V3.1 No alias Rad23 UV excision repair protein family 0.02 Archaeplastida
Zm00001e030951_P001 No alias shuttle protein (RAD23) 0.02 Archaeplastida
Zm00001e036768_P002 No alias shuttle protein (RAD23) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006289 nucleotide-excision repair IEA Interproscan
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
InterPro domains Description Start Stop
IPR015940 UBA 341 376
IPR015940 UBA 152 190
IPR000626 Ubiquitin_dom 3 76
IPR015360 XPC-bd 260 315
No external refs found!