Gb_20130

Description : transcription factor (DOF)

Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0059053 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0052167 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_20130
Cluster	HCCA: Cluster_317

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01019619001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
LOC_Os02g15350.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
LOC_Os02g45200.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
LOC_Os03g16850.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
LOC_Os09g29960.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
MA_10436933g0030	No alias	component BAF255/170 of chromatin remodeling complex....	0.04	Archaeplastida
Pp3c4_850V3.1	No alias	cycling DOF factor 3	0.02	Archaeplastida
Pp3c9_4910V3.1	No alias	cycling DOF factor 2	0.02	Archaeplastida
Solyc02g077950.3.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
Solyc04g070960.3.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e002951_P002	No alias	transcription factor (DOF)	0.02	Archaeplastida
Zm00001e007228_P002	No alias	transcription factor (DOF)	0.02	Archaeplastida
Zm00001e009303_P001	No alias	transcription factor (DOF)	0.02	Archaeplastida
Zm00001e010454_P001	No alias	transcription factor (DOF)	0.02	Archaeplastida
Zm00001e041944_P001	No alias	transcription factor (DOF)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEP	Neighborhood
BP	GO:0000160	phosphorelay signal transduction system	IEP	Neighborhood
MF	GO:0003743	translation initiation factor activity	IEP	Neighborhood
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEP	Neighborhood
MF	GO:0005516	calmodulin binding	IEP	Neighborhood
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	IEP	Neighborhood
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEP	Neighborhood
BP	GO:0006813	potassium ion transport	IEP	Neighborhood
MF	GO:0008135	translation factor activity, RNA binding	IEP	Neighborhood
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0035556	intracellular signal transduction	IEP	Neighborhood
CC	GO:0044459	plasma membrane part	IEP	Neighborhood
BP	GO:0071804	cellular potassium ion transport	IEP	Neighborhood
BP	GO:0071805	potassium ion transmembrane transport	IEP	Neighborhood
CC	GO:0098797	plasma membrane protein complex	IEP	Neighborhood
CC	GO:1990234	transferase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	350	406

External Links

No external refs found!

Gb_20130

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation