Gb_20144


Description : transcription factor (DOF)


Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0000055 (SeedPlants) Phylogenetic Tree(s): OG_06_0000055_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20144
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AMTR_s00010p00264070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00012p00176640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AT1G64620 No alias Dof-type zinc finger DNA-binding family protein 0.02 Archaeplastida
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
AT2G37590 DOF2.4, ATDOF2.4 DNA binding with one finger 2.4 0.03 Archaeplastida
AT2G46590 DAG2 Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
AT3G47500 CDF3 cycling DOF factor 3 0.02 Archaeplastida
AT3G55370 OBP3 OBF-binding protein 3 0.05 Archaeplastida
AT5G60200 TMO6 TARGET OF MONOPTEROS 6 0.04 Archaeplastida
AT5G60850 OBP4 OBF binding protein 4 0.01 Archaeplastida
GSVIVT01005057001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
GSVIVT01016538001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01021086001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01021212001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
GSVIVT01029943001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.01 Archaeplastida
Gb_28499 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os01g17000.1 No alias transcription factor (DOF) 0.01 Archaeplastida
LOC_Os01g64590.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os02g45200.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os02g47810.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os03g16850.1 No alias transcription factor (DOF) 0.05 Archaeplastida
LOC_Os03g55610.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os03g60630.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os04g47990.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os04g58190.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os05g02150.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os06g17410.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os07g13260.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os08g38220.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os10g35300.2 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os12g38200.1 No alias transcription factor (DOF) 0.03 Archaeplastida
MA_16692g0010 No alias transcription factor (DOF) 0.02 Archaeplastida
MA_248613g0010 No alias No annotation 0.06 Archaeplastida
MA_459791g0010 No alias transcription factor (DOF) 0.03 Archaeplastida
MA_52474g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_74014g0010 No alias transcription factor (DOF) 0.02 Archaeplastida
MA_939289g0010 No alias transcription factor (DOF) 0.02 Archaeplastida
Mp1g18540.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp2g20790.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Pp3c13_2000V3.1 No alias cycling DOF factor 3 0.02 Archaeplastida
Solyc02g077950.3.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Solyc02g077960.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc02g078620.1.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc02g090220.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc03g112930.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc03g121400.1.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc06g076030.3.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Solyc09g010680.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc10g009360.4.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Solyc10g086440.2.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e000526_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e002951_P002 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e005107_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e005785_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e007228_P002 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e010454_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e015414_P004 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e015597_P001 No alias transcription factor (DOF) 0.05 Archaeplastida
Zm00001e018163_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e019172_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e023218_P004 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e027411_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e027634_P002 No alias transcription factor (DOF) 0.05 Archaeplastida
Zm00001e035074_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e035892_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e041444_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e041944_P001 No alias transcription factor (DOF) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0043085 positive regulation of catalytic activity IEP Neighborhood
BP GO:0044093 positive regulation of molecular function IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR003851 Znf_Dof 50 105
No external refs found!