Gb_20278


Description : monomeric E3 ubiquitin ligase (HECT)


Gene families : OG0001508 (Archaeplastida) Phylogenetic Tree(s): OG0001508_tree ,
OG_05_0015537 (LandPlants) Phylogenetic Tree(s): OG_05_0015537_tree ,
OG_06_0027136 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20278
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00100p00119160 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.07 Archaeplastida
AT4G38600 UPL3, KAK HEAT repeat ;HECT-domain (ubiquitin-transferase) 0.06 Archaeplastida
GSVIVT01018731001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01024033001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
MA_10426439g0010 No alias monomeric E3 ubiquitin ligase (HECT) 0.06 Archaeplastida
MA_10428377g0020 No alias monomeric E3 ubiquitin ligase (HECT) 0.04 Archaeplastida
MA_140610g0010 No alias monomeric E3 ubiquitin ligase (HECT) 0.04 Archaeplastida
MA_62286g0020 No alias monomeric E3 ubiquitin ligase (HECT) 0.04 Archaeplastida
MA_884104g0010 No alias monomeric E3 ubiquitin ligase (HECT) 0.08 Archaeplastida
Mp1g24750.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.02 Archaeplastida
Pp3c5_10300V3.1 No alias HEAT repeat ;HECT-domain (ubiquitin-transferase) 0.03 Archaeplastida
Smo146155 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc01g111530.3.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.06 Archaeplastida
Solyc10g055450.2.1 No alias monomeric E3 ubiquitin ligase (HECT) 0.05 Archaeplastida
Zm00001e008508_P001 No alias monomeric E3 ubiquitin ligase (HECT) 0.04 Archaeplastida
Zm00001e013385_P003 No alias monomeric E3 ubiquitin ligase (HECT) 0.11 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
MF GO:0060090 molecular adaptor activity IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!