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  5. Gb_20300

Gb_20300


Description : transcription factor (bHLH). transcriptional regulator (CIB)


Gene families : OG0000051 (Archaeplastida) Phylogenetic Tree(s): OG0000051_tree ,
OG_05_0000091 (LandPlants) Phylogenetic Tree(s): OG_05_0000091_tree ,
OG_06_0053383 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20300
Cluster HCCA: Cluster_330

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00255540 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AMTR_s00065p00184910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AT3G23690 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
GSVIVT01007389001 No alias External stimuli response.light.UV-A/blue... 0.03 Archaeplastida
GSVIVT01013553001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
GSVIVT01023585001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01026056001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Gb_07223 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
Gb_21366 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g41229.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_90272g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Pp3c6_9520V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Solyc03g034000.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
Solyc03g119390.4.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
Solyc04g077480.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Zm00001e010540_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e011866_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e021418_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e032950_P002 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e034446_P001 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.05 Archaeplastida
Zm00001e035219_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e036318_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e037598_P001 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 329 376
No external refs found!