Gb_20468

Description : subfamily ABCG transporter

Gene families : OG0002321 (Archaeplastida) Phylogenetic Tree(s): OG0002321_tree ,
OG_05_0001596 (LandPlants) Phylogenetic Tree(s): OG_05_0001596_tree ,
OG_06_0001496 (SeedPlants) Phylogenetic Tree(s): OG_06_0001496_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_20468
Cluster	HCCA: Cluster_146

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00181450	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.07	Archaeplastida
AT2G37360	No alias	ABC-2 type transporter family protein	0.1	Archaeplastida
AT3G53510	No alias	ABC-2 type transporter family protein	0.02	Archaeplastida
AT3G55090	No alias	ABC-2 type transporter family protein	0.04	Archaeplastida
AT3G55100	No alias	ABC-2 type transporter family protein	0.05	Archaeplastida
AT3G55110	No alias	ABC-2 type transporter family protein	0.07	Archaeplastida
AT5G13580	No alias	ABC-2 type transporter family protein	0.02	Archaeplastida
GSVIVT01025582001	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01032625001	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
LOC_Os01g61940.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
LOC_Os03g17350.1	No alias	subfamily ABCG transporter	0.07	Archaeplastida
LOC_Os05g02890.1	No alias	subfamily ABCG transporter	0.05	Archaeplastida
MA_10432886g0010	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Smo84236	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
Solyc04g010210.1.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Solyc05g054890.4.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Solyc09g005970.1.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e001269_P001	No alias	subfamily ABCG transporter	0.06	Archaeplastida
Zm00001e019365_P001	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Zm00001e028790_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Neighborhood
MF	GO:0003885	D-arabinono-1,4-lactone oxidase activity	IEP	Neighborhood
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
MF	GO:0005507	copper ion binding	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
BP	GO:0008150	biological_process	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0008373	sialyltransferase activity	IEP	Neighborhood
MF	GO:0010333	terpene synthase activity	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Neighborhood
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Neighborhood
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	487	695
IPR003439	ABC_transporter-like	157	309

External Links

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Gb_20468

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation