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  5. Gb_20537

Gb_20537


Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 295.0)


Gene families : OG0000390 (Archaeplastida) Phylogenetic Tree(s): OG0000390_tree ,
OG_05_0000129 (LandPlants) Phylogenetic Tree(s): OG_05_0000129_tree ,
OG_06_0000040 (SeedPlants) Phylogenetic Tree(s): OG_06_0000040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20537
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Gb_00583 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.16 Archaeplastida
Gb_02146 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 Archaeplastida
Gb_02770 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.11 Archaeplastida
Gb_02905 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.12 Archaeplastida
Gb_03950 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.19 Archaeplastida
Gb_04812 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.18 Archaeplastida
Gb_05094 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.18 Archaeplastida
Gb_05692 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.21 Archaeplastida
Gb_06720 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.18 Archaeplastida
Gb_06760 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.14 Archaeplastida
Gb_07759 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.06 Archaeplastida
Gb_08180 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.13 Archaeplastida
Gb_08424 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.21 Archaeplastida
Gb_10082 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.16 Archaeplastida
Gb_10404 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.08 Archaeplastida
Gb_11849 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.09 Archaeplastida
Gb_13743 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Gb_13767 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.03 Archaeplastida
Gb_15407 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.08 Archaeplastida
Gb_15410 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 Archaeplastida
Gb_15469 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.12 Archaeplastida
Gb_16634 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.19 Archaeplastida
Gb_16945 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Gb_17559 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Gb_18380 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Gb_18456 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Gb_19120 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.18 Archaeplastida
Gb_21218 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.1 Archaeplastida
Gb_21357 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.18 Archaeplastida
Gb_23888 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.07 Archaeplastida
Gb_25155 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.17 Archaeplastida
Gb_25845 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.15 Archaeplastida
Gb_25861 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.16 Archaeplastida
Gb_26000 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.09 Archaeplastida
Gb_26083 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_26530 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.1 Archaeplastida
Gb_26702 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.07 Archaeplastida
Gb_28461 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.14 Archaeplastida
Gb_29132 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.14 Archaeplastida
Gb_29291 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.08 Archaeplastida
Gb_29642 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.21 Archaeplastida
Gb_31730 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.24 Archaeplastida
Gb_32604 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.08 Archaeplastida
Gb_32952 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.23 Archaeplastida
Gb_33153 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.12 Archaeplastida
Gb_33272 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.2 Archaeplastida
Gb_33568 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.06 Archaeplastida
Gb_34479 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.12 Archaeplastida
Gb_34971 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.11 Archaeplastida
Gb_35456 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Gb_36049 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 Archaeplastida
Gb_36489 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.14 Archaeplastida
Gb_36670 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.16 Archaeplastida
Gb_36823 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.1 Archaeplastida
Gb_37111 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 Archaeplastida
Gb_38490 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.08 Archaeplastida
Gb_39849 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.18 Archaeplastida
Gb_40169 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.1 Archaeplastida
Gb_40420 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.17 Archaeplastida
Gb_40931 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 Archaeplastida
Gb_41665 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.08 Archaeplastida
Gb_41711 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.16 Archaeplastida
Pp3c25_5410V3.1 No alias No annotation 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013103 RVT_2 48 289
No external refs found!