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  5. Gb_20564

Gb_20564


Description : Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana (sp|o65695|sau50_arath : 99.4)


Gene families : OG0000015 (Archaeplastida) Phylogenetic Tree(s): OG0000015_tree ,
OG_05_0000013 (LandPlants) Phylogenetic Tree(s): OG_05_0000013_tree ,
OG_06_0000016 (SeedPlants) Phylogenetic Tree(s): OG_06_0000016_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20564
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00251850 evm_27.TU.AmTr_v1... Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00017p00065780 evm_27.TU.AmTr_v1... Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00237p00022130 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT4G13790 No alias SAUR-like auxin-responsive protein family 0.02 Archaeplastida
AT4G31320 No alias SAUR-like auxin-responsive protein family 0.02 Archaeplastida
AT5G10990 No alias SAUR-like auxin-responsive protein family 0.03 Archaeplastida
GSVIVT01009875001 No alias Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01019094001 No alias Auxin-induced protein 10A5 OS=Glycine max 0.04 Archaeplastida
Gb_02943 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g05060.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g24740.1 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os04g56680.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10431311g0020 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_105570g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_10901g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_121065g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_124243g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_16245g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_170671g0030 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_17262g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_176455g0020 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_18725g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_194750g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_68091g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_95364g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c13_3290V3.1 No alias SAUR-like auxin-responsive protein family 0.02 Archaeplastida
Pp3c4_13150V3.1 No alias SAUR-like auxin-responsive protein family 0.03 Archaeplastida
Solyc01g110860.1.1 No alias Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc03g033590.1.1 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc05g056430.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc07g042470.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc08g079140.1.1 No alias Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc10g018340.1.1 No alias Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e009870_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e041857_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003676 SAUR_fam 89 171
No external refs found!