Coexpression cluster: Cluster_2 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1901576 organic substance biosynthetic process 11.58% (11/95) 2.48 4e-06 0.000618
GO:0009058 biosynthetic process 11.58% (11/95) 2.37 9e-06 0.000852
GO:0044249 cellular biosynthetic process 11.58% (11/95) 2.52 4e-06 0.000987
GO:0004329 formate-tetrahydrofolate ligase activity 2.11% (2/95) 7.44 4.4e-05 0.003055
GO:0003674 molecular_function 38.95% (37/95) 0.88 5.5e-05 0.003078
GO:0044271 cellular nitrogen compound biosynthetic process 8.42% (8/95) 2.52 8.1e-05 0.003744
GO:0003735 structural constituent of ribosome 4.21% (4/95) 3.66 0.000285 0.008848
GO:0043228 non-membrane-bounded organelle 4.21% (4/95) 3.36 0.00063 0.009254
GO:0043603 cellular amide metabolic process 4.21% (4/95) 3.36 0.00063 0.009254
GO:0043232 intracellular non-membrane-bounded organelle 4.21% (4/95) 3.36 0.00063 0.009254
GO:0006412 translation 4.21% (4/95) 3.68 0.000272 0.009496
GO:0005840 ribosome 4.21% (4/95) 3.72 0.000247 0.009858
GO:0043167 ion binding 14.74% (14/95) 1.42 0.00071 0.009902
GO:0034645 cellular macromolecule biosynthetic process 5.26% (5/95) 2.93 0.000526 0.010473
GO:0071704 organic substance metabolic process 16.84% (16/95) 1.32 0.00061 0.010635
GO:0006518 peptide metabolic process 4.21% (4/95) 3.48 0.000461 0.010726
GO:0043604 amide biosynthetic process 4.21% (4/95) 3.45 0.0005 0.010732
GO:0005198 structural molecule activity 4.21% (4/95) 3.51 0.000425 0.010774
GO:0043043 peptide biosynthetic process 4.21% (4/95) 3.55 0.00039 0.01089
GO:1990904 ribonucleoprotein complex 4.21% (4/95) 3.38 0.000607 0.01129
GO:0090407 organophosphate biosynthetic process 5.26% (5/95) 2.75 0.000907 0.01205
GO:0003824 catalytic activity 21.05% (20/95) 1.07 0.001064 0.012906
GO:0009059 macromolecule biosynthetic process 5.26% (5/95) 2.71 0.00104 0.013186
GO:0017144 drug metabolic process 3.16% (3/95) 3.85 0.001186 0.013784
GO:0044237 cellular metabolic process 14.74% (14/95) 1.33 0.001287 0.014363
GO:0005575 cellular_component 12.63% (12/95) 1.45 0.001406 0.015091
GO:0019637 organophosphate metabolic process 5.26% (5/95) 2.58 0.001525 0.015197
GO:1901566 organonitrogen compound biosynthetic process 5.26% (5/95) 2.58 0.001525 0.015197
GO:0008150 biological_process 24.21% (23/95) 0.9 0.002093 0.020132
GO:0008152 metabolic process 17.89% (17/95) 1.09 0.002252 0.020271
GO:0022804 active transmembrane transporter activity 3.16% (3/95) 3.54 0.002209 0.020544
GO:0030554 adenyl nucleotide binding 9.47% (9/95) 1.63 0.002511 0.020603
GO:0046500 S-adenosylmethionine metabolic process 1.05% (1/95) 8.02 0.003846 0.020634
GO:0072350 tricarboxylic acid metabolic process 1.05% (1/95) 8.02 0.003846 0.020634
GO:0004396 hexokinase activity 1.05% (1/95) 8.02 0.003846 0.020634
GO:0006556 S-adenosylmethionine biosynthetic process 1.05% (1/95) 8.02 0.003846 0.020634
GO:0004779 sulfate adenylyltransferase activity 1.05% (1/95) 8.02 0.003846 0.020634
GO:0004781 sulfate adenylyltransferase (ATP) activity 1.05% (1/95) 8.02 0.003846 0.020634
GO:0005536 glucose binding 1.05% (1/95) 8.02 0.003846 0.020634
GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity 1.05% (1/95) 8.02 0.003846 0.020634
GO:0016999 antibiotic metabolic process 1.05% (1/95) 8.02 0.003846 0.020634
GO:0004340 glucokinase activity 1.05% (1/95) 8.02 0.003846 0.020634
GO:0015977 carbon fixation 1.05% (1/95) 8.02 0.003846 0.020634
GO:0008964 phosphoenolpyruvate carboxylase activity 1.05% (1/95) 8.02 0.003846 0.020634
GO:0006101 citrate metabolic process 1.05% (1/95) 8.02 0.003846 0.020634
GO:0006099 tricarboxylic acid cycle 1.05% (1/95) 8.02 0.003846 0.020634
GO:0004478 methionine adenosyltransferase activity 1.05% (1/95) 8.02 0.003846 0.020634
GO:0032559 adenyl ribonucleotide binding 9.47% (9/95) 1.64 0.002467 0.020854
GO:0000166 nucleotide binding 10.53% (10/95) 1.41 0.004336 0.020857
GO:0043168 anion binding 10.53% (10/95) 1.41 0.004336 0.020857
GO:1901265 nucleoside phosphate binding 10.53% (10/95) 1.41 0.004336 0.020857
GO:0006753 nucleoside phosphate metabolic process 4.21% (4/95) 2.6 0.004419 0.020894
GO:0005622 intracellular 3.16% (3/95) 3.5 0.002403 0.020948
GO:0006796 phosphate-containing compound metabolic process 7.37% (7/95) 1.79 0.004206 0.021336
GO:0006793 phosphorus metabolic process 7.37% (7/95) 1.79 0.004206 0.021336
GO:0009117 nucleotide metabolic process 4.21% (4/95) 2.62 0.004152 0.021855
GO:0016879 ligase activity, forming carbon-nitrogen bonds 2.11% (2/95) 4.27 0.004825 0.022437
GO:0009165 nucleotide biosynthetic process 4.21% (4/95) 2.72 0.003267 0.024632
GO:1901293 nucleoside phosphate biosynthetic process 4.21% (4/95) 2.72 0.003267 0.024632
GO:0044444 cytoplasmic part 4.21% (4/95) 2.51 0.005391 0.024658
GO:0031224 intrinsic component of membrane 5.26% (5/95) 2.14 0.005676 0.025136
GO:0016021 integral component of membrane 5.26% (5/95) 2.14 0.005676 0.025136
GO:0044238 primary metabolic process 14.74% (14/95) 1.18 0.003231 0.025756
GO:0036094 small molecule binding 10.53% (10/95) 1.35 0.005918 0.025798
GO:0055086 nucleobase-containing small molecule metabolic process 4.21% (4/95) 2.44 0.006498 0.027891
GO:0043229 intracellular organelle 4.21% (4/95) 2.43 0.006616 0.027969
GO:0043226 organelle 4.21% (4/95) 2.42 0.006857 0.028135
GO:0032555 purine ribonucleotide binding 9.47% (9/95) 1.41 0.006837 0.02847
GO:0017076 purine nucleotide binding 9.47% (9/95) 1.4 0.007084 0.028644
GO:0042626 ATPase activity, coupled to transmembrane movement of substances 2.11% (2/95) 3.89 0.008018 0.029827
GO:0043492 ATPase activity, coupled to movement of substances 2.11% (2/95) 3.89 0.008018 0.029827
GO:0005524 ATP binding 8.42% (8/95) 1.48 0.00814 0.029883
GO:0051156 glucose 6-phosphate metabolic process 1.05% (1/95) 7.02 0.007677 0.030168
GO:0070566 adenylyltransferase activity 1.05% (1/95) 7.02 0.007677 0.030168
GO:0032553 ribonucleotide binding 9.47% (9/95) 1.38 0.007813 0.030277
GO:0097367 carbohydrate derivative binding 9.47% (9/95) 1.37 0.007977 0.030487
GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity 2.11% (2/95) 3.81 0.00893 0.031538
GO:0015399 primary active transmembrane transporter activity 2.11% (2/95) 3.81 0.00893 0.031538
GO:0009987 cellular process 15.79% (15/95) 0.97 0.008751 0.031707
GO:0044281 small molecule metabolic process 5.26% (5/95) 1.97 0.009212 0.032126
GO:0005488 binding 22.11% (21/95) 0.76 0.010075 0.034702
GO:0008144 drug binding 8.42% (8/95) 1.41 0.01078 0.036236
GO:0016887 ATPase activity 3.16% (3/95) 2.72 0.010693 0.036384
GO:0004611 phosphoenolpyruvate carboxykinase activity 1.05% (1/95) 6.44 0.011494 0.036859
GO:0048029 monosaccharide binding 1.05% (1/95) 6.44 0.011494 0.036859
GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor 1.05% (1/95) 6.44 0.011494 0.036859
GO:0004749 ribose phosphate diphosphokinase activity 1.05% (1/95) 6.44 0.011494 0.036859
GO:0044267 cellular protein metabolic process 6.32% (6/95) 1.65 0.012312 0.038596
GO:0042623 ATPase activity, coupled 2.11% (2/95) 3.56 0.012466 0.038644
GO:0034641 cellular nitrogen compound metabolic process 8.42% (8/95) 1.37 0.012232 0.038781
GO:0016772 transferase activity, transferring phosphorus-containing groups 6.32% (6/95) 1.64 0.012767 0.039143
GO:0034654 nucleobase-containing compound biosynthetic process 4.21% (4/95) 2.14 0.013139 0.039845
GO:0009108 coenzyme biosynthetic process 2.11% (2/95) 3.5 0.013571 0.040713
GO:0044425 membrane part 5.26% (5/95) 1.81 0.01434 0.042563
GO:0006732 coenzyme metabolic process 2.11% (2/95) 3.38 0.015904 0.046707
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_96 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_140 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_236 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_59 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_165 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_230 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_72 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_88 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_102 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_119 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_121 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_123 0.041 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_129 0.031 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_140 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_143 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_157 0.024 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_161 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_181 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_19 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_170 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_191 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_268 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_330 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_4 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_108 0.026 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_118 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_46 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_50 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_108 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_296 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_357 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_12 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_63 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_90 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_180 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_253 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_258 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_160 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_27 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_151 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_150 0.025 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_34 0.022 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_94 0.022 Archaeplastida Compare
Sequences (95) (download table)

InterPro Domains

GO Terms

Family Terms