Coexpression cluster: Cluster_193 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006303 double-strand break repair via nonhomologous end joining 2.7% (2/74) 8.54 9e-06 0.000754
GO:0000726 non-recombinational repair 2.7% (2/74) 8.54 9e-06 0.000754
GO:0006302 double-strand break repair 2.7% (2/74) 7.8 3.2e-05 0.001672
GO:0005634 nucleus 5.41% (4/74) 3.74 0.000238 0.009453
GO:0043231 intracellular membrane-bounded organelle 5.41% (4/74) 3.47 0.00048 0.012711
GO:0043227 membrane-bounded organelle 5.41% (4/74) 3.47 0.00048 0.012711
GO:0043226 organelle 6.76% (5/74) 2.77 0.000863 0.017161
GO:0044424 intracellular part 9.46% (7/74) 2.13 0.001097 0.019382
GO:0043229 intracellular organelle 6.76% (5/74) 2.77 0.000854 0.019401
GO:0004677 DNA-dependent protein kinase activity 1.35% (1/74) 9.12 0.001791 0.025893
GO:0044464 cell part 9.46% (7/74) 2.03 0.00164 0.026077
GO:0070603 SWI/SNF superfamily-type complex 1.35% (1/74) 8.12 0.00358 0.03348
GO:0031011 Ino80 complex 1.35% (1/74) 8.12 0.00358 0.03348
GO:0097346 INO80-type complex 1.35% (1/74) 8.12 0.00358 0.03348
GO:0097526 spliceosomal tri-snRNP complex 1.35% (1/74) 8.12 0.00358 0.03348
GO:0033202 DNA helicase complex 1.35% (1/74) 8.12 0.00358 0.03348
GO:0046540 U4/U6 x U5 tri-snRNP complex 1.35% (1/74) 8.12 0.00358 0.03348
GO:1904949 ATPase complex 1.35% (1/74) 7.54 0.005365 0.047388
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_118 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_4 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_91 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_156 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_275 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_248 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_208 0.024 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_36 0.02 Archaeplastida Compare
Sequences (74) (download table)

InterPro Domains

GO Terms

Family Terms