Coexpression cluster: Cluster_54 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0030554 adenyl nucleotide binding 23.08% (12/52) 2.48 1e-06 2e-05
GO:0006298 mismatch repair 5.77% (3/52) 7.31 1e-06 2.2e-05
GO:0035639 purine ribonucleoside triphosphate binding 23.08% (12/52) 2.54 1e-06 2.2e-05
GO:0008144 drug binding 23.08% (12/52) 2.64 0.0 2.2e-05
GO:0032559 adenyl ribonucleotide binding 23.08% (12/52) 2.48 1e-06 2.2e-05
GO:0030983 mismatched DNA binding 5.77% (3/52) 7.52 1e-06 2.3e-05
GO:0005524 ATP binding 23.08% (12/52) 2.71 0.0 2.4e-05
GO:0097367 carbohydrate derivative binding 23.08% (12/52) 2.31 4e-06 4.2e-05
GO:0032553 ribonucleotide binding 23.08% (12/52) 2.32 3e-06 4.3e-05
GO:0017076 purine nucleotide binding 23.08% (12/52) 2.33 3e-06 4.4e-05
GO:0032555 purine ribonucleotide binding 23.08% (12/52) 2.33 3e-06 4.9e-05
GO:1901265 nucleoside phosphate binding 23.08% (12/52) 2.2 8e-06 7.9e-05
GO:0000166 nucleotide binding 23.08% (12/52) 2.2 8e-06 7.9e-05
GO:0043168 anion binding 23.08% (12/52) 2.15 1.1e-05 0.000101
GO:0036094 small molecule binding 23.08% (12/52) 2.14 1.2e-05 0.000104
GO:1901363 heterocyclic compound binding 28.85% (15/52) 1.61 6.3e-05 0.000441
GO:0097159 organic cyclic compound binding 28.85% (15/52) 1.61 6.3e-05 0.000441
GO:0003690 double-stranded DNA binding 5.77% (3/52) 5.31 6.1e-05 0.000486
GO:0033554 cellular response to stress 5.77% (3/52) 5.09 9.7e-05 0.00056
GO:0051716 cellular response to stimulus 5.77% (3/52) 5.09 9.7e-05 0.00056
GO:0006974 cellular response to DNA damage stimulus 5.77% (3/52) 5.09 9.7e-05 0.00056
GO:0006281 DNA repair 5.77% (3/52) 5.15 8.5e-05 0.000569
GO:0005488 binding 36.54% (19/52) 1.1 0.000571 0.003155
GO:0006259 DNA metabolic process 7.69% (4/52) 3.33 0.000689 0.003647
GO:0003677 DNA binding 9.62% (5/52) 2.75 0.000886 0.004503
GO:0043167 ion binding 25.0% (13/52) 1.33 0.001447 0.006805
GO:0003676 nucleic acid binding 13.46% (7/52) 2.05 0.001433 0.007
GO:0034641 cellular nitrogen compound metabolic process 11.54% (6/52) 2.15 0.002248 0.010195
GO:0005664 nuclear origin of replication recognition complex 1.92% (1/52) 8.63 0.002516 0.011019
GO:0006950 response to stress 5.77% (3/52) 3.4 0.002931 0.012408
GO:0006139 nucleobase-containing compound metabolic process 9.62% (5/52) 2.3 0.00344 0.014095
GO:0008097 5S rRNA binding 1.92% (1/52) 8.05 0.003772 0.014969
GO:0046483 heterocycle metabolic process 9.62% (5/52) 2.19 0.004747 0.018267
GO:0006725 cellular aromatic compound metabolic process 9.62% (5/52) 2.16 0.005146 0.018672
GO:0000808 origin recognition complex 1.92% (1/52) 7.63 0.005026 0.018773
GO:1901360 organic cyclic compound metabolic process 9.62% (5/52) 2.12 0.005697 0.020099
GO:0050896 response to stimulus 5.77% (3/52) 2.96 0.006866 0.023566
GO:0090304 nucleic acid metabolic process 7.69% (4/52) 2.34 0.008048 0.026897
GO:0044454 nuclear chromosome part 1.92% (1/52) 6.83 0.008779 0.028588
GO:0008408 3'-5' exonuclease activity 1.92% (1/52) 6.31 0.012518 0.038776
GO:0019843 rRNA binding 1.92% (1/52) 6.31 0.012518 0.038776
GO:0004527 exonuclease activity 1.92% (1/52) 5.93 0.016244 0.049118
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_110 0.048 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_194 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_60 0.053 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_122 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_135 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_260 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_155 0.034 Archaeplastida Compare
Gingko biloba HCCA Cluster_188 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_337 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_1 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_115 0.063 Archaeplastida Compare
Zea mays HCCA Cluster_175 0.056 Archaeplastida Compare
Zea mays HCCA Cluster_344 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_3 0.05 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_69 0.045 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_84 0.033 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_116 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_154 0.046 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_218 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_76 0.048 Archaeplastida Compare
Picea abies HCCA Cluster_97 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_194 0.067 Archaeplastida Compare
Picea abies HCCA Cluster_202 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_256 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_376 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_401 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_496 0.034 Archaeplastida Compare
Picea abies HCCA Cluster_497 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_529 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_21 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_41 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_87 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_173 0.039 Archaeplastida Compare
Oryza sativa HCCA Cluster_239 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_257 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_109 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_204 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_22 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_35 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_77 0.049 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_272 0.033 Archaeplastida Compare
Vitis vinifera HCCA Cluster_26 0.029 Archaeplastida Compare
Vitis vinifera HCCA Cluster_53 0.062 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_10 0.051 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_88 0.026 Archaeplastida Compare
Sequences (52) (download table)

InterPro Domains

GO Terms

Family Terms