Coexpression cluster: Cluster_22 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044424 intracellular part 90.62% (145/160) 0.37 0.0 0.0
GO:0044464 cell part 93.12% (149/160) 0.27 0.0 3.2e-05
GO:0016579 protein deubiquitination 3.75% (6/160) 4.26 1e-06 0.000256
GO:0009640 photomorphogenesis 5.0% (8/160) 2.72 3.2e-05 0.004405
GO:0043227 membrane-bounded organelle 75.62% (121/160) 0.33 2.4e-05 0.004465
GO:0010212 response to ionizing radiation 3.75% (6/160) 3.48 1.7e-05 0.004707
GO:0043231 intracellular membrane-bounded organelle 75.62% (121/160) 0.33 2.2e-05 0.004822
GO:0090304 nucleic acid metabolic process 16.88% (27/160) 1.22 3.2e-05 0.00499
GO:0043226 organelle 75.62% (121/160) 0.32 5e-05 0.005438
GO:0043229 intracellular organelle 75.62% (121/160) 0.32 4.9e-05 0.005907
GO:0010332 response to gamma radiation 3.12% (5/160) 3.53 7.6e-05 0.007553
GO:0070646 protein modification by small protein removal 3.75% (6/160) 2.95 0.000133 0.010424
GO:0006259 DNA metabolic process 8.75% (14/160) 1.69 0.000121 0.011012
GO:0016567 protein ubiquitination 4.38% (7/160) 2.66 0.000133 0.011201
GO:0007062 sister chromatid cohesion 3.75% (6/160) 2.88 0.000176 0.011336
GO:0009560 embryo sac egg cell differentiation 3.75% (6/160) 2.91 0.000156 0.011426
GO:0005634 nucleus 47.5% (76/160) 0.5 0.000169 0.011551
GO:0051128 regulation of cellular component organization 5.62% (9/160) 2.12 0.000256 0.012755
GO:0000502 proteasome complex 2.5% (4/160) 3.71 0.000253 0.013225
GO:1905368 peptidase complex 2.5% (4/160) 3.71 0.000253 0.013225
GO:1905369 endopeptidase complex 2.5% (4/160) 3.71 0.000253 0.013225
GO:0009630 gravitropism 3.75% (6/160) 2.75 0.000283 0.013498
GO:0032446 protein modification by small protein conjugation 4.38% (7/160) 2.52 0.000237 0.014439
GO:0009314 response to radiation 11.25% (18/160) 1.32 0.000321 0.014646
GO:0070647 protein modification by small protein conjugation or removal 5.0% (8/160) 2.22 0.000343 0.01505
GO:0009629 response to gravity 3.75% (6/160) 2.68 0.000371 0.015656
GO:0009639 response to red or far red light 5.62% (9/160) 2.01 0.000442 0.016157
GO:0009606 tropism 3.75% (6/160) 2.64 0.000423 0.016551
GO:0098813 nuclear chromosome segregation 3.12% (5/160) 2.99 0.000438 0.016563
GO:0006310 DNA recombination 4.38% (7/160) 2.35 0.000477 0.016881
GO:0045132 meiotic chromosome segregation 3.12% (5/160) 3.0 0.00042 0.017053
GO:0006139 nucleobase-containing compound metabolic process 18.12% (29/160) 0.93 0.000528 0.018077
GO:0009628 response to abiotic stimulus 18.75% (30/160) 0.9 0.000558 0.018538
GO:0043170 macromolecule metabolic process 27.5% (44/160) 0.69 0.000603 0.019449
GO:0033043 regulation of organelle organization 4.38% (7/160) 2.26 0.000686 0.021497
GO:0022412 cellular process involved in reproduction in multicellular organism 3.75% (6/160) 2.47 0.000791 0.024073
GO:0003723 RNA binding 6.25% (10/160) 1.75 0.000857 0.025374
GO:0007059 chromosome segregation 3.12% (5/160) 2.76 0.000909 0.026218
GO:0016071 mRNA metabolic process 5.0% (8/160) 1.99 0.00097 0.027269
GO:0005829 cytosol 11.88% (19/160) 1.14 0.001039 0.028466
GO:0003676 nucleic acid binding 15.0% (24/160) 0.96 0.001271 0.033963
GO:0004386 helicase activity 3.12% (5/160) 2.64 0.001313 0.034265
GO:0008026 ATP-dependent helicase activity 2.5% (4/160) 3.02 0.001518 0.036176
GO:0070035 purine NTP-dependent helicase activity 2.5% (4/160) 3.02 0.001518 0.036176
GO:0010629 negative regulation of gene expression 6.25% (10/160) 1.65 0.00146 0.036369
GO:0033044 regulation of chromosome organization 3.12% (5/160) 2.61 0.001443 0.036785
GO:0006508 proteolysis 8.12% (13/160) 1.37 0.001734 0.039601
GO:0006974 cellular response to DNA damage stimulus 4.38% (7/160) 2.04 0.001705 0.039753
GO:0010468 regulation of gene expression 15.0% (24/160) 0.91 0.002028 0.045364
GO:0008541 proteasome regulatory particle, lid subcomplex 1.25% (2/160) 4.85 0.002113 0.046326
GO:0051276 chromosome organization 3.75% (6/160) 2.18 0.002221 0.047735
GO:0046483 heterocycle metabolic process 18.75% (30/160) 0.78 0.002268 0.047811
GO:0006606 protein import into nucleus 2.5% (4/160) 2.85 0.002372 0.049048
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_10 0.032 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_23 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_27 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_37 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_38 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_43 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_51 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_54 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_83 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_114 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_124 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_139 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_142 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_164 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_168 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_202 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_212 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_12 0.029 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_22 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_144 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_172 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_196 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_213 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_215 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_218 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_236 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_260 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_4 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_93 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_102 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_164 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_175 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_196 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_205 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_331 0.041 Archaeplastida Compare
Gingko biloba HCCA Cluster_336 0.029 Archaeplastida Compare
Gingko biloba HCCA Cluster_338 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_12 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_16 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_19 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_30 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_58 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_61 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_110 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_115 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_136 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_188 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_201 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_220 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_230 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_250 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_258 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_261 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_270 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_276 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_283 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_309 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_353 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_355 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_61 0.03 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_68 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_84 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_110 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_132 0.029 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_158 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_159 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_8 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_11 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_30 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_111 0.032 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_121 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_169 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_186 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_187 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_238 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_253 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_270 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_286 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_300 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_18 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_100 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_158 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_190 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_252 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_290 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_321 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_364 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_393 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_419 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_492 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_520 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_21 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_40 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_41 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_96 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_138 0.043 Archaeplastida Compare
Oryza sativa HCCA Cluster_141 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_155 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_160 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_166 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_173 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_175 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_191 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_215 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_227 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_230 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_293 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_297 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_316 0.033 Archaeplastida Compare
Oryza sativa HCCA Cluster_360 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_3 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_75 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_84 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_125 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_137 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_219 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_2 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_8 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_22 0.034 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_26 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_28 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_30 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_35 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_45 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_131 0.034 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_158 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_173 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_177 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_182 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_212 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_247 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_263 0.033 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_272 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_44 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_53 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_54 0.033 Archaeplastida Compare
Vitis vinifera HCCA Cluster_118 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_123 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_160 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_214 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_221 0.036 Archaeplastida Compare
Vitis vinifera HCCA Cluster_233 0.028 Archaeplastida Compare
Vitis vinifera HCCA Cluster_237 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_246 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_50 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_121 0.022 Archaeplastida Compare
Sequences (160) (download table)

InterPro Domains

GO Terms

Family Terms