Coexpression cluster: Cluster_1 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006401 RNA catabolic process 5.67% (8/141) 3.81 0.0 0.00013
GO:0006402 mRNA catabolic process 4.96% (7/141) 3.74 1e-06 0.000387
GO:0000956 nuclear-transcribed mRNA catabolic process 4.96% (7/141) 3.75 1e-06 0.000543
GO:0044260 cellular macromolecule metabolic process 27.66% (39/141) 1.08 3e-06 0.000952
GO:0006807 nitrogen compound metabolic process 34.75% (49/141) 0.84 1.2e-05 0.002779
GO:0005634 nucleus 50.35% (71/141) 0.59 2.6e-05 0.003028
GO:0090304 nucleic acid metabolic process 17.73% (25/141) 1.29 2.6e-05 0.003336
GO:0043170 macromolecule metabolic process 31.21% (44/141) 0.87 2.5e-05 0.003583
GO:0043412 macromolecule modification 17.73% (25/141) 1.26 3.7e-05 0.003816
GO:0044464 cell part 90.78% (128/141) 0.23 2.1e-05 0.003925
GO:0009057 macromolecule catabolic process 9.22% (13/141) 2.0 2.4e-05 0.003967
GO:0044265 cellular macromolecule catabolic process 7.8% (11/141) 2.1 5.6e-05 0.005314
GO:0044424 intracellular part 84.4% (119/141) 0.26 7.4e-05 0.006525
GO:0006464 cellular protein modification process 14.89% (21/141) 1.3 0.000116 0.008803
GO:0036211 protein modification process 14.89% (21/141) 1.3 0.000116 0.008803
GO:0010629 negative regulation of gene expression 7.8% (11/141) 1.97 0.000129 0.009222
GO:0046349 amino sugar biosynthetic process 1.42% (2/141) 6.62 0.000154 0.009254
GO:0051011 microtubule minus-end binding 1.42% (2/141) 6.62 0.000154 0.009254
GO:0005488 binding 34.75% (49/141) 0.7 0.000162 0.009277
GO:0009630 gravitropism 4.26% (6/141) 2.93 0.000143 0.009601
GO:0009629 response to gravity 4.26% (6/141) 2.86 0.000188 0.010238
GO:0043231 intracellular membrane-bounded organelle 74.47% (105/141) 0.31 0.000215 0.010253
GO:0009606 tropism 4.26% (6/141) 2.83 0.000215 0.010667
GO:0043227 membrane-bounded organelle 74.47% (105/141) 0.31 0.000235 0.010736
GO:0005829 cytosol 13.48% (19/141) 1.32 0.000211 0.010975
GO:0046483 heterocycle metabolic process 21.28% (30/141) 0.96 0.000263 0.011148
GO:0010587 miRNA catabolic process 1.42% (2/141) 6.29 0.000256 0.011234
GO:0034655 nucleobase-containing compound catabolic process 5.67% (8/141) 2.26 0.000291 0.011861
GO:0044237 cellular metabolic process 39.01% (55/141) 0.61 0.000305 0.012016
GO:0044267 cellular protein metabolic process 16.31% (23/141) 1.13 0.000317 0.012072
GO:0010586 miRNA metabolic process 1.42% (2/141) 6.03 0.000382 0.012129
GO:0034661 ncRNA catabolic process 1.42% (2/141) 6.03 0.000382 0.012129
GO:0006486 protein glycosylation 4.26% (6/141) 2.68 0.000362 0.012542
GO:0043413 macromolecule glycosylation 4.26% (6/141) 2.68 0.000362 0.012542
GO:0070085 glycosylation 4.26% (6/141) 2.68 0.000362 0.012542
GO:0010605 negative regulation of macromolecule metabolic process 7.8% (11/141) 1.79 0.000374 0.012568
GO:0043226 organelle 74.47% (105/141) 0.29 0.000421 0.012651
GO:0043229 intracellular organelle 74.47% (105/141) 0.29 0.000413 0.012754
GO:0044238 primary metabolic process 36.17% (51/141) 0.62 0.000451 0.013225
GO:0016567 protein ubiquitination 4.26% (6/141) 2.62 0.000467 0.013349
GO:0009892 negative regulation of metabolic process 7.8% (11/141) 1.72 0.000546 0.015209
GO:0034641 cellular nitrogen compound metabolic process 21.28% (30/141) 0.88 0.000701 0.019091
GO:0016070 RNA metabolic process 12.06% (17/141) 1.27 0.000719 0.019121
GO:0032446 protein modification by small protein conjugation 4.26% (6/141) 2.48 0.000766 0.019459
GO:0006139 nucleobase-containing compound metabolic process 18.44% (26/141) 0.95 0.000765 0.019868
GO:0071704 organic substance metabolic process 39.01% (55/141) 0.55 0.000847 0.020597
GO:0070647 protein modification by small protein conjugation or removal 4.96% (7/141) 2.21 0.000836 0.020768
GO:1901575 organic substance catabolic process 12.06% (17/141) 1.23 0.000911 0.021242
GO:0048586 regulation of long-day photoperiodism, flowering 1.42% (2/141) 5.45 0.000908 0.021614
GO:0009056 catabolic process 13.48% (19/141) 1.14 0.001006 0.022987
GO:0048573 photoperiodism, flowering 3.55% (5/141) 2.68 0.001147 0.025712
GO:0005515 protein binding 15.6% (22/141) 1.01 0.001229 0.027017
GO:0006725 cellular aromatic compound metabolic process 21.28% (30/141) 0.82 0.001289 0.027792
GO:0009648 photoperiodism 3.55% (5/141) 2.62 0.001399 0.029608
GO:0019538 protein metabolic process 18.44% (26/141) 0.88 0.00163 0.033267
GO:0006259 DNA metabolic process 7.8% (11/141) 1.53 0.001612 0.033501
GO:0098586 cellular response to virus 2.84% (4/141) 2.94 0.001869 0.037487
GO:0000419 RNA polymerase V complex 1.42% (2/141) 4.92 0.00194 0.037592
GO:0006040 amino sugar metabolic process 1.42% (2/141) 4.92 0.00194 0.037592
GO:0008152 metabolic process 40.43% (57/141) 0.49 0.001979 0.037691
GO:0016071 mRNA metabolic process 4.96% (7/141) 1.98 0.002076 0.038896
GO:0009615 response to virus 3.55% (5/141) 2.44 0.002398 0.043511
GO:0015631 tubulin binding 2.13% (3/141) 3.5 0.002388 0.044032
GO:2000028 regulation of photoperiodism, flowering 1.42% (2/141) 4.71 0.002595 0.046341
GO:1901360 organic cyclic compound metabolic process 21.28% (30/141) 0.75 0.002679 0.04711
GO:0019439 aromatic compound catabolic process 5.67% (8/141) 1.74 0.002869 0.04894
GO:0044270 cellular nitrogen compound catabolic process 5.67% (8/141) 1.74 0.002869 0.04894
GO:0030276 clathrin binding 1.42% (2/141) 4.62 0.002956 0.04896
GO:0048519 negative regulation of biological process 9.93% (14/141) 1.21 0.003019 0.049304
GO:0044248 cellular catabolic process 11.35% (16/141) 1.11 0.003106 0.049313
GO:0046700 heterocycle catabolic process 5.67% (8/141) 1.74 0.002944 0.049484
GO:1901361 organic cyclic compound catabolic process 5.67% (8/141) 1.72 0.003179 0.049769
GO:0040029 regulation of gene expression, epigenetic 4.26% (6/141) 2.08 0.003092 0.049785
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_38 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_79 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_86 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_99 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_101 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_108 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_115 0.03 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_179 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_186 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_189 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_199 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_220 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_221 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_252 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_42 0.029 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_67 0.03 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_78 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_116 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_132 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_140 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_172 0.029 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_190 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_213 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_231 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_233 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_234 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_249 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_255 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_70 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_14 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_41 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_147 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_155 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_258 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_267 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_289 0.031 Archaeplastida Compare
Gingko biloba HCCA Cluster_312 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_324 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_336 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_30 0.032 Archaeplastida Compare
Zea mays HCCA Cluster_58 0.036 Archaeplastida Compare
Zea mays HCCA Cluster_61 0.05 Archaeplastida Compare
Zea mays HCCA Cluster_75 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_136 0.04 Archaeplastida Compare
Zea mays HCCA Cluster_141 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_177 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_205 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_216 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_234 0.035 Archaeplastida Compare
Zea mays HCCA Cluster_258 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_267 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_275 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_302 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_313 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_19 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_22 0.03 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_68 0.028 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_111 0.027 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_128 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_11 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_95 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_99 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_111 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_126 0.031 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_146 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_154 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_166 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_169 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_176 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_235 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_241 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_253 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_231 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_247 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_283 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_290 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_380 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_393 0.037 Archaeplastida Compare
Picea abies HCCA Cluster_400 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_409 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_420 0.034 Archaeplastida Compare
Picea abies HCCA Cluster_434 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_480 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_492 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_515 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_520 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_523 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_12 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_40 0.035 Archaeplastida Compare
Oryza sativa HCCA Cluster_42 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_72 0.038 Archaeplastida Compare
Oryza sativa HCCA Cluster_112 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_141 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_158 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_174 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_180 0.033 Archaeplastida Compare
Oryza sativa HCCA Cluster_188 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_211 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_215 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_219 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_227 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_269 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_322 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_327 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_329 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_348 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_350 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_80 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_81 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_84 0.03 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_95 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_133 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_181 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_47 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_60 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_79 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_127 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_131 0.049 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_132 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_158 0.034 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_160 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_173 0.038 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_177 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_182 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_192 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_202 0.048 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_212 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_217 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_226 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_229 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_233 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_236 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_240 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_245 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_250 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_259 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_263 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_264 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_11 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_26 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_54 0.04 Archaeplastida Compare
Vitis vinifera HCCA Cluster_56 0.047 Archaeplastida Compare
Vitis vinifera HCCA Cluster_62 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_65 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_110 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_120 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_123 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_126 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_155 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_159 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_163 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_164 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_180 0.028 Archaeplastida Compare
Vitis vinifera HCCA Cluster_185 0.035 Archaeplastida Compare
Vitis vinifera HCCA Cluster_189 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_220 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_221 0.03 Archaeplastida Compare
Vitis vinifera HCCA Cluster_225 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_232 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_233 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_236 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_238 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_241 0.023 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_95 0.021 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_142 0.021 Archaeplastida Compare
Sequences (141) (download table)

InterPro Domains

GO Terms

Family Terms