Coexpression cluster: Cluster_58 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1901360 organic cyclic compound metabolic process 5.26% (6/114) 2.8 0.000235 0.001881
GO:0006725 cellular aromatic compound metabolic process 5.26% (6/114) 2.82 0.00022 0.001886
GO:0003824 catalytic activity 11.4% (13/114) 1.65 0.000256 0.001923
GO:0060249 anatomical structure homeostasis 1.75% (2/114) 6.57 0.000182 0.001983
GO:0000723 telomere maintenance 1.75% (2/114) 6.57 0.000182 0.001983
GO:0032200 telomere organization 1.75% (2/114) 6.57 0.000182 0.001983
GO:0046483 heterocycle metabolic process 5.26% (6/114) 2.83 0.000215 0.001986
GO:0032774 RNA biosynthetic process 3.51% (4/114) 3.78 0.000214 0.002142
GO:0016787 hydrolase activity 6.14% (7/114) 2.43 0.000342 0.002282
GO:0051276 chromosome organization 1.75% (2/114) 6.15 0.000338 0.002384
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 3.51% (4/114) 4.11 8.8e-05 0.002638
GO:0034062 5'-3' RNA polymerase activity 3.51% (4/114) 4.11 8.8e-05 0.002638
GO:0097747 RNA polymerase activity 3.51% (4/114) 4.11 8.8e-05 0.002638
GO:0016779 nucleotidyltransferase activity 3.51% (4/114) 3.85 0.000177 0.002655
GO:0006139 nucleobase-containing compound metabolic process 5.26% (6/114) 2.91 0.000159 0.002734
GO:0140098 catalytic activity, acting on RNA 3.51% (4/114) 3.51 0.000437 0.002757
GO:0097659 nucleic acid-templated transcription 3.51% (4/114) 3.91 0.000152 0.003047
GO:0006351 transcription, DNA-templated 3.51% (4/114) 3.91 0.000152 0.003047
GO:0006950 response to stress 2.63% (3/114) 4.25 0.000538 0.003226
GO:0042592 homeostatic process 1.75% (2/114) 5.69 0.000659 0.003593
GO:0003678 DNA helicase activity 1.75% (2/114) 5.69 0.000659 0.003593
GO:0050896 response to stimulus 2.63% (3/114) 4.04 0.000823 0.004113
GO:0034654 nucleobase-containing compound biosynthetic process 3.51% (4/114) 3.28 0.000788 0.004114
GO:0140097 catalytic activity, acting on DNA 1.75% (2/114) 5.45 0.00093 0.004464
GO:0019438 aromatic compound biosynthetic process 3.51% (4/114) 3.15 0.001102 0.004896
GO:0006996 organelle organization 1.75% (2/114) 5.35 0.001082 0.004996
GO:0018130 heterocycle biosynthetic process 3.51% (4/114) 3.13 0.001167 0.005
GO:0006281 DNA repair 1.75% (2/114) 5.25 0.001246 0.005156
GO:0051716 cellular response to stimulus 1.75% (2/114) 5.15 0.001421 0.005167
GO:0033554 cellular response to stress 1.75% (2/114) 5.15 0.001421 0.005167
GO:0006974 cellular response to DNA damage stimulus 1.75% (2/114) 5.15 0.001421 0.005167
GO:1901362 organic cyclic compound biosynthetic process 3.51% (4/114) 3.09 0.001305 0.005219
GO:0016070 RNA metabolic process 3.51% (4/114) 3.02 0.001533 0.005255
GO:0017111 nucleoside-triphosphatase activity 3.51% (4/114) 3.03 0.001493 0.005269
GO:0090304 nucleic acid metabolic process 5.26% (6/114) 3.23 4.6e-05 0.005547
GO:0016817 hydrolase activity, acting on acid anhydrides 3.51% (4/114) 2.94 0.001878 0.005779
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 3.51% (4/114) 2.94 0.001878 0.005779
GO:0016462 pyrophosphatase activity 3.51% (4/114) 2.94 0.001878 0.005779
GO:0065008 regulation of biological quality 1.75% (2/114) 4.98 0.001803 0.006011
GO:0004386 helicase activity 1.75% (2/114) 4.69 0.002698 0.008093
GO:0016772 transferase activity, transferring phosphorus-containing groups 4.39% (5/114) 2.32 0.003397 0.009944
GO:0003677 DNA binding 3.51% (4/114) 2.57 0.004774 0.01364
GO:0044260 cellular macromolecule metabolic process 6.14% (7/114) 1.65 0.00722 0.02015
GO:0034641 cellular nitrogen compound metabolic process 5.26% (6/114) 1.8 0.007936 0.021644
GO:0006259 DNA metabolic process 1.75% (2/114) 3.76 0.009606 0.025617
GO:1901363 heterocyclic compound binding 7.02% (8/114) 1.38 0.012397 0.031651
GO:0097159 organic cyclic compound binding 7.02% (8/114) 1.38 0.012397 0.031651
GO:0044238 primary metabolic process 7.02% (8/114) 1.31 0.015909 0.038182
GO:0043170 macromolecule metabolic process 6.14% (7/114) 1.43 0.015625 0.038265
GO:0016740 transferase activity 4.39% (5/114) 1.79 0.015309 0.038273
GO:0071704 organic substance metabolic process 7.02% (8/114) 1.26 0.019437 0.045735
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_69 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_13 0.074 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_24 0.046 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_25 0.055 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_31 0.056 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_35 0.049 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_40 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_54 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_57 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_61 0.038 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_62 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_65 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_66 0.042 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_71 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_76 0.045 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_77 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_79 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_85 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_86 0.051 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_89 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_92 0.078 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_93 0.065 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_100 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_101 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_115 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_116 0.038 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_122 0.047 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_123 0.036 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_138 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_144 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_153 0.062 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_164 0.053 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_168 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_172 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_178 0.044 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_181 0.055 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_188 0.039 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_190 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_195 0.043 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_196 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_197 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_211 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_254 0.061 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_256 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_299 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_305 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_183 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_255 0.019 Archaeplastida Compare
Sequences (114) (download table)

InterPro Domains

GO Terms

Family Terms