Coexpression cluster: Cluster_25 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0032991 protein-containing complex 34.41% (32/93) 2.67 0.0 0.0
GO:0044391 ribosomal subunit 16.13% (15/93) 3.93 0.0 0.0
GO:0043043 peptide biosynthetic process 16.13% (15/93) 3.6 0.0 0.0
GO:0006412 translation 16.13% (15/93) 3.61 0.0 0.0
GO:0003735 structural constituent of ribosome 16.13% (15/93) 3.64 0.0 0.0
GO:0044445 cytosolic part 15.05% (14/93) 3.72 0.0 0.0
GO:0006518 peptide metabolic process 16.13% (15/93) 3.55 0.0 0.0
GO:0044444 cytoplasmic part 69.89% (65/93) 1.01 0.0 0.0
GO:0043604 amide biosynthetic process 16.13% (15/93) 3.45 0.0 0.0
GO:0005198 structural molecule activity 16.13% (15/93) 3.3 0.0 0.0
GO:0022627 cytosolic small ribosomal subunit 9.68% (9/93) 4.69 0.0 0.0
GO:0005840 ribosome 13.98% (13/93) 3.54 0.0 0.0
GO:0098803 respiratory chain complex 9.68% (9/93) 4.64 0.0 0.0
GO:1990904 ribonucleoprotein complex 16.13% (15/93) 3.17 0.0 0.0
GO:0043603 cellular amide metabolic process 16.13% (15/93) 3.11 0.0 0.0
GO:1990204 oxidoreductase complex 9.68% (9/93) 4.44 0.0 0.0
GO:0044422 organelle part 35.48% (33/93) 1.66 0.0 0.0
GO:0015935 small ribosomal subunit 9.68% (9/93) 4.34 0.0 0.0
GO:0044446 intracellular organelle part 35.48% (33/93) 1.66 0.0 0.0
GO:0098800 inner mitochondrial membrane protein complex 9.68% (9/93) 4.26 0.0 0.0
GO:0098798 mitochondrial protein complex 9.68% (9/93) 4.11 0.0 0.0
GO:0044455 mitochondrial membrane part 9.68% (9/93) 4.05 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 16.13% (15/93) 2.69 0.0 0.0
GO:0043228 non-membrane-bounded organelle 16.13% (15/93) 2.69 0.0 0.0
GO:1902494 catalytic complex 13.98% (13/93) 2.9 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 19.35% (18/93) 2.06 0.0 4e-06
GO:0051029 rRNA transport 3.23% (3/93) 7.48 0.0 6e-06
GO:0006407 rRNA export from nucleus 3.23% (3/93) 7.48 0.0 6e-06
GO:0005750 mitochondrial respiratory chain complex III 4.3% (4/93) 6.05 0.0 6e-06
GO:0045275 respiratory chain complex III 4.3% (4/93) 6.05 0.0 6e-06
GO:0098796 membrane protein complex 10.75% (10/93) 2.99 1e-06 8e-06
GO:0044429 mitochondrial part 9.68% (9/93) 3.17 1e-06 1.1e-05
GO:0009853 photorespiration 7.53% (7/93) 3.71 1e-06 1.7e-05
GO:0097064 ncRNA export from nucleus 3.23% (3/93) 6.99 1e-06 1.8e-05
GO:0009059 macromolecule biosynthetic process 19.35% (18/93) 1.88 1e-06 2e-05
GO:0070069 cytochrome complex 4.3% (4/93) 5.46 2e-06 2.6e-05
GO:0043094 cellular metabolic compound salvage 7.53% (7/93) 3.52 3e-06 3.5e-05
GO:0044271 cellular nitrogen compound biosynthetic process 18.28% (17/93) 1.85 4e-06 5.2e-05
GO:0005739 mitochondrion 29.03% (27/93) 1.28 7e-06 8.8e-05
GO:0015934 large ribosomal subunit 6.45% (6/93) 3.48 1.7e-05 0.000207
GO:0005747 mitochondrial respiratory chain complex I 4.3% (4/93) 4.13 8.3e-05 0.000971
GO:0030964 NADH dehydrogenase complex 4.3% (4/93) 4.05 0.000103 0.001158
GO:0045271 respiratory chain complex I 4.3% (4/93) 4.05 0.000103 0.001158
GO:0043226 organelle 78.49% (73/93) 0.37 0.000209 0.002237
GO:0043229 intracellular organelle 78.49% (73/93) 0.37 0.000206 0.002252
GO:1901566 organonitrogen compound biosynthetic process 16.13% (15/93) 1.51 0.000222 0.002319
GO:0042254 ribosome biogenesis 4.3% (4/93) 3.5 0.000442 0.004523
GO:0022613 ribonucleoprotein complex biogenesis 4.3% (4/93) 3.42 0.000545 0.005464
GO:0046907 intracellular transport 11.83% (11/93) 1.67 0.000675 0.006624
GO:0044428 nuclear part 8.6% (8/93) 2.04 0.000737 0.006947
GO:0000418 RNA polymerase IV complex 2.15% (2/93) 5.63 0.000722 0.006949
GO:0022625 cytosolic large ribosomal subunit 4.3% (4/93) 3.3 0.000754 0.006974
GO:0000419 RNA polymerase V complex 2.15% (2/93) 5.52 0.000852 0.00745
GO:0044451 nucleoplasm part 4.3% (4/93) 3.26 0.000826 0.007498
GO:0015931 nucleobase-containing compound transport 4.3% (4/93) 3.25 0.000851 0.007583
GO:0044425 membrane part 10.75% (10/93) 1.72 0.000902 0.007745
GO:0004129 cytochrome-c oxidase activity 2.15% (2/93) 5.41 0.000992 0.00795
GO:0015002 heme-copper terminal oxidase activity 2.15% (2/93) 5.41 0.000992 0.00795
GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor 2.15% (2/93) 5.41 0.000992 0.00795
GO:0016675 oxidoreductase activity, acting on a heme group of donors 2.15% (2/93) 5.41 0.000992 0.00795
GO:0005665 RNA polymerase II, core complex 2.15% (2/93) 5.22 0.001302 0.010266
GO:0051649 establishment of localization in cell 11.83% (11/93) 1.55 0.001341 0.0104
GO:0044267 cellular protein metabolic process 17.2% (16/93) 1.2 0.001382 0.010554
GO:0050657 nucleic acid transport 3.23% (3/93) 3.71 0.001575 0.011308
GO:0050658 RNA transport 3.23% (3/93) 3.71 0.001575 0.011308
GO:0006405 RNA export from nucleus 3.23% (3/93) 3.71 0.001575 0.011308
GO:0051236 establishment of RNA localization 3.23% (3/93) 3.71 0.001575 0.011308
GO:0051168 nuclear export 3.23% (3/93) 3.65 0.001783 0.012615
GO:0005753 mitochondrial proton-transporting ATP synthase complex 2.15% (2/93) 4.82 0.002254 0.01571
GO:0003674 molecular_function 86.02% (80/93) 0.23 0.002357 0.016199
GO:0001510 RNA methylation 4.3% (4/93) 2.79 0.002744 0.01808
GO:0051641 cellular localization 11.83% (11/93) 1.42 0.00272 0.018173
GO:0045259 proton-transporting ATP synthase complex 2.15% (2/93) 4.69 0.002703 0.018313
GO:0009055 electron transfer activity 3.23% (3/93) 3.41 0.002881 0.018727
GO:0016469 proton-transporting two-sector ATPase complex 2.15% (2/93) 4.63 0.002943 0.018871
GO:0000428 DNA-directed RNA polymerase complex 2.15% (2/93) 4.57 0.003191 0.01968
GO:0030880 RNA polymerase complex 2.15% (2/93) 4.57 0.003191 0.01968
GO:0055029 nuclear DNA-directed RNA polymerase complex 2.15% (2/93) 4.57 0.003191 0.01968
GO:0031083 BLOC-1 complex 1.08% (1/93) 8.22 0.003363 0.01997
GO:0031082 BLOC complex 1.08% (1/93) 8.22 0.003363 0.01997
GO:0033617 mitochondrial respiratory chain complex IV assembly 1.08% (1/93) 8.22 0.003363 0.01997
GO:0044424 intracellular part 82.8% (77/93) 0.24 0.004069 0.023871
GO:0006626 protein targeting to mitochondrion 3.23% (3/93) 3.11 0.005108 0.0296
GO:0070585 protein localization to mitochondrion 3.23% (3/93) 3.09 0.005388 0.03049
GO:0072655 establishment of protein localization to mitochondrion 3.23% (3/93) 3.09 0.005388 0.03049
GO:0033108 mitochondrial respiratory chain complex assembly 1.08% (1/93) 7.22 0.006715 0.036289
GO:0051418 microtubule nucleation by microtubule organizing center 1.08% (1/93) 7.22 0.006715 0.036289
GO:0008274 gamma-tubulin ring complex 1.08% (1/93) 7.22 0.006715 0.036289
GO:0000931 gamma-tubulin large complex 1.08% (1/93) 7.22 0.006715 0.036289
GO:0044260 cellular macromolecule metabolic process 22.58% (21/93) 0.78 0.008214 0.043899
GO:0061695 transferase complex, transferring phosphorus-containing groups 2.15% (2/93) 3.82 0.008826 0.046653
GO:0015786 UDP-glucose transmembrane transport 1.08% (1/93) 6.63 0.010055 0.048853
GO:0000930 gamma-tubulin complex 1.08% (1/93) 6.63 0.010055 0.048853
GO:0008535 respiratory chain complex IV assembly 1.08% (1/93) 6.63 0.010055 0.048853
GO:0033185 dolichol-phosphate-mannose synthase complex 1.08% (1/93) 6.63 0.010055 0.048853
GO:0045324 late endosome to vacuole transport 1.08% (1/93) 6.63 0.010055 0.048853
GO:0004582 dolichyl-phosphate beta-D-mannosyltransferase activity 1.08% (1/93) 6.63 0.010055 0.048853
GO:0044450 microtubule organizing center part 1.08% (1/93) 6.63 0.010055 0.048853
GO:0031501 mannosyltransferase complex 1.08% (1/93) 6.63 0.010055 0.048853
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_123 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_50 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_95 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_120 0.028 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_130 0.032 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_137 0.035 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_160 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_117 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_20 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_29 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_121 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_150 0.072 Archaeplastida Compare
Gingko biloba HCCA Cluster_152 0.04 Archaeplastida Compare
Gingko biloba HCCA Cluster_227 0.028 Archaeplastida Compare
Gingko biloba HCCA Cluster_260 0.06 Archaeplastida Compare
Zea mays HCCA Cluster_43 0.054 Archaeplastida Compare
Zea mays HCCA Cluster_52 0.042 Archaeplastida Compare
Zea mays HCCA Cluster_186 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_262 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_309 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_350 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_13 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_119 0.117 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_18 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_28 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_78 0.033 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_90 0.036 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_121 0.031 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_155 0.058 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_192 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_252 0.048 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_298 0.05 Archaeplastida Compare
Picea abies HCCA Cluster_90 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_126 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_199 0.043 Archaeplastida Compare
Picea abies HCCA Cluster_204 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_208 0.041 Archaeplastida Compare
Picea abies HCCA Cluster_273 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_402 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_423 0.044 Archaeplastida Compare
Oryza sativa HCCA Cluster_69 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_77 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_149 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_175 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_207 0.044 Archaeplastida Compare
Oryza sativa HCCA Cluster_212 0.067 Archaeplastida Compare
Oryza sativa HCCA Cluster_285 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_351 0.056 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_7 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_39 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_90 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_113 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_183 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_21 0.041 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_57 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_123 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_141 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_155 0.069 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_166 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_237 0.049 Archaeplastida Compare
Vitis vinifera HCCA Cluster_111 0.028 Archaeplastida Compare
Vitis vinifera HCCA Cluster_132 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_168 0.057 Archaeplastida Compare
Vitis vinifera HCCA Cluster_171 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_206 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_215 0.056 Archaeplastida Compare
Vitis vinifera HCCA Cluster_231 0.059 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_28 0.023 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_91 0.031 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_100 0.027 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_149 0.024 Archaeplastida Compare
Sequences (93) (download table)

InterPro Domains

GO Terms

Family Terms