Heatmap: Cluster_86 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
0.17 -0.28 -0.02 1.07 0.96 0.59 0.98 0.62 0.87 1.31 1.7 1.8 0.64 -4.21 - -2.98 - -0.65 -1.04 - - - - - - -3.47
0.56 0.41 0.03 0.26 0.13 0.06 0.26 0.52 0.66 0.55 0.72 0.76 0.12 -2.19 -1.33 -1.83 -1.19 -0.45 -0.44 -0.86 -1.49 -0.18 0.26 0.33 -0.03 -0.5
-0.28 -1.89 -0.94 -0.31 0.56 0.28 0.69 0.55 0.94 1.25 1.41 1.47 0.63 -1.04 -1.15 -1.39 -1.2 -0.46 -0.49 -0.86 -4.82 -3.55 -0.61 -0.36 -0.51 -0.9
0.16 0.47 0.58 0.2 1.22 0.41 0.44 0.27 -0.84 0.42 1.09 1.45 1.52 -1.11 -0.56 -0.41 -0.54 -1.05 -1.43 -0.47 - - -5.02 -1.56 -5.98 -1.08
-0.57 -1.64 -1.51 -0.85 0.37 -0.12 0.38 0.14 0.09 0.78 1.85 1.58 0.33 -0.12 0.48 -0.2 -1.6 0.0 -0.2 -2.29 -5.8 -2.79 -1.28 0.84 -1.71 -0.81
-0.76 -1.96 -1.19 -0.72 -0.65 0.42 0.02 0.72 0.75 1.43 1.87 1.42 -0.1 -1.13 -0.33 -0.61 -2.4 0.14 -0.78 -2.53 - -2.18 -0.17 0.42 -0.67 -0.34
0.35 -1.1 -0.58 0.19 0.59 0.75 0.98 0.88 0.82 1.47 1.68 1.3 0.51 -1.56 -3.56 -1.98 -5.92 -3.12 -2.6 -1.66 -5.19 -4.39 0.52 -0.77 -2.85 -1.74
-0.76 -0.92 -0.26 -0.27 0.03 0.5 0.58 0.57 1.0 1.32 1.11 1.02 -0.2 -4.52 0.71 -3.42 -0.05 -1.89 -1.17 -1.89 -2.04 -0.38 -1.86 -0.26 0.26 0.29
-1.0 -0.78 -0.47 -0.29 -0.16 -0.21 0.62 0.73 0.79 1.39 1.35 0.92 -0.25 -4.15 0.82 -3.27 0.35 -1.63 -1.67 -1.36 -2.16 -0.27 -1.38 -0.73 0.2 0.47
0.83 0.18 0.01 0.97 0.73 -0.17 -0.08 0.43 0.78 1.0 0.7 1.0 1.28 -1.23 -2.11 -2.35 -3.88 -1.16 -0.45 -1.53 -3.04 -1.63 -0.05 -1.45 -0.34 -1.03
0.22 -0.27 -1.37 0.07 0.69 0.25 0.06 0.2 0.96 1.18 1.65 1.23 0.31 -1.9 -3.46 -3.44 -1.41 -1.78 -0.75 -1.12 -1.75 -2.52 0.09 0.68 -1.13 -0.19
0.76 0.75 0.3 0.61 0.55 0.39 -0.04 0.33 0.48 0.59 0.99 1.09 0.19 -2.18 -1.84 -3.61 -0.98 -0.12 -0.3 -0.01 -5.14 -2.53 -0.9 0.01 -0.82 -0.77
0.6 0.3 -0.08 -0.17 -0.06 -0.13 -0.1 0.32 0.68 1.13 1.45 1.37 0.48 -2.17 -1.85 -1.94 -1.01 -1.38 -1.43 -0.49 -2.46 -3.7 0.48 0.34 -0.92 -0.52
0.3 -0.33 0.14 0.14 0.1 0.09 0.18 0.22 0.57 0.37 1.23 1.32 0.71 -0.65 -0.64 -0.27 -0.75 -1.24 -0.34 -0.2 -2.53 -2.69 0.21 -0.51 -0.41 -1.5
-0.5 -5.38 -3.32 -1.36 -0.01 0.55 0.49 -0.14 0.64 1.82 1.89 1.57 0.16 -1.7 -3.49 -3.74 -1.19 -2.02 -1.68 -0.21 -2.45 -1.45 0.39 0.84 -1.59 -0.3
-0.04 -0.95 -0.8 -0.17 0.34 0.24 0.39 0.53 0.65 0.96 1.15 1.31 0.54 -1.64 -1.35 -1.75 -1.62 -1.19 -2.16 -0.77 -1.41 0.5 0.15 0.18 -0.33 -0.38
1.16 0.12 -0.04 1.25 1.22 0.68 0.61 0.66 0.03 0.21 1.16 1.55 1.82 - -2.17 -4.38 -4.08 -2.31 -1.77 -1.67 -5.26 -3.67 - - -3.35 -3.7
-0.11 -0.01 -0.27 0.46 0.51 0.12 0.41 0.65 0.91 1.0 0.95 1.01 -0.22 -0.86 -0.49 -1.05 -0.38 -0.07 -0.35 -0.66 -6.4 -3.56 -0.24 -0.64 -0.56 -0.68
0.42 0.11 0.0 0.13 0.68 0.59 0.32 0.25 0.84 0.76 0.96 1.16 0.79 -1.11 -0.73 -0.76 -0.88 -0.53 -0.04 -0.56 -3.03 -4.95 -1.14 -0.7 -1.82 -0.99
0.67 0.18 0.1 0.48 0.26 0.1 0.02 0.19 0.35 0.48 0.91 1.39 1.21 -2.06 -3.24 -1.66 -2.56 -1.34 -2.37 -1.77 -1.15 -0.57 0.48 0.73 -0.98 -0.97
0.51 0.34 -0.09 0.19 0.53 0.47 0.18 0.41 0.55 0.61 0.75 0.6 0.12 -0.89 -0.63 -0.83 -0.62 -0.19 -0.33 -0.37 -1.91 -1.66 -0.03 -0.27 -0.49 -0.49
-1.06 0.44 -0.33 0.76 0.22 0.42 0.48 0.06 0.27 1.01 1.53 1.26 -1.92 -1.42 -1.56 -4.95 -2.14 -1.23 -0.69 -1.36 -0.67 0.18 0.31 0.26 -0.34 -0.86
0.72 0.48 0.34 1.07 0.85 -0.15 0.45 0.68 0.39 0.85 1.02 0.95 1.26 -2.97 -3.5 -3.01 0.33 -1.8 -2.58 -1.94 -3.66 -0.86 -3.41 -2.01 -1.13 -0.51
-0.38 -0.43 -0.06 0.2 0.34 0.29 0.41 0.45 0.66 0.66 0.7 0.69 0.07 -0.22 -0.35 -0.31 -0.28 -0.15 -0.43 -0.33 -2.61 -0.67 0.04 -0.2 -0.82 -0.37
-0.84 -1.97 -0.35 -0.61 -0.51 0.69 1.26 0.45 1.18 1.94 2.23 1.28 0.4 - - - - - - -2.76 -0.2 -4.5 0.89 - -3.15 -3.61
-0.56 -2.05 -1.77 -1.25 -0.27 0.36 -0.2 -0.05 0.84 1.86 1.83 1.49 -0.4 -1.56 -1.45 -0.75 -2.2 -1.58 -2.43 -1.94 -1.21 0.46 -0.14 0.23 -0.5 -0.03
-1.54 -1.45 -4.0 -0.01 -0.22 -0.76 0.75 0.7 0.6 1.51 2.1 1.31 -0.74 -1.82 -4.09 -1.54 -1.77 -3.59 - -3.09 -0.52 -2.02 0.72 1.26 -0.48 -0.21
-1.42 -3.82 -4.07 -2.08 -1.59 -1.88 -1.53 -2.08 2.2 2.01 2.67 2.44 -0.45 -1.67 1.12 - - - - - -3.02 - - -1.88 - -4.65
-0.09 -0.19 -0.29 -0.27 0.1 0.31 0.54 0.52 0.79 1.19 1.34 1.17 0.29 -1.19 -0.62 -0.8 -1.17 -1.19 -1.01 -0.62 -4.03 -0.77 -0.42 -0.2 -0.54 -0.55
0.07 0.07 0.64 -0.13 -0.22 -0.25 -0.09 -0.13 1.03 1.51 2.2 2.23 0.03 -2.78 -2.76 -4.73 -3.47 -5.31 -4.35 -2.25 -3.08 -2.33 -0.33 -0.96 -3.75 -1.83
0.88 0.83 0.75 0.82 0.61 0.15 0.58 0.88 0.49 0.98 1.2 1.12 1.35 -8.25 -8.34 -8.21 0.72 -8.1 -7.82 -5.64 -13.59 -2.18 -7.09 -7.18 -2.51 -1.17
0.86 0.63 0.34 0.31 0.41 0.53 1.02 1.09 1.12 1.22 1.04 0.86 1.01 -7.31 -8.84 - -0.3 -7.27 -9.66 -5.44 - -2.98 -9.25 -4.65 -0.7 0.21
0.46 0.29 0.3 0.73 0.56 -0.12 0.13 0.46 0.2 0.73 1.36 1.45 1.14 -4.36 -4.82 -4.56 0.76 -3.93 -3.93 -3.83 -4.79 0.22 -1.61 -1.68 -1.05 -0.04
-0.3 -0.01 0.01 -0.04 -0.12 -0.44 0.2 0.3 0.82 1.19 1.26 1.15 0.08 -3.01 -2.1 -2.75 -0.97 -0.24 -0.8 0.02 -0.9 -0.23 0.44 0.14 -0.64 -0.92
0.2 -0.02 -0.01 0.11 -0.19 -0.21 -0.04 0.29 0.69 0.68 1.03 1.2 0.21 -0.49 0.01 -0.15 -0.49 -0.2 -0.16 -0.73 -3.3 -1.67 0.39 -0.3 -1.28 -1.06
0.74 0.31 -0.18 0.19 0.39 0.28 0.69 0.74 0.9 1.09 1.27 1.05 0.97 -2.09 -1.63 -1.32 -2.44 -1.54 -2.27 -2.44 -3.53 -3.54 -0.62 0.58 -1.7 -1.61
-0.42 -0.96 -0.26 0.42 0.41 -0.7 0.36 -0.07 0.02 0.96 1.28 1.89 -0.12 -1.2 -1.9 -0.36 -1.79 -1.69 -1.87 -2.37 -0.92 -5.15 0.96 0.51 0.25 -0.49
0.78 -0.16 -0.73 0.32 0.26 -0.22 -0.3 -0.07 0.33 0.63 1.42 1.59 1.23 -0.49 -2.65 -1.54 -1.67 -1.98 -2.93 -2.32 -1.75 -1.59 -0.12 0.92 -0.36 -0.89
0.5 0.73 0.09 1.68 1.27 0.0 0.72 1.05 0.42 1.11 1.13 0.71 1.47 - -4.22 - -2.77 -0.68 -3.14 -2.64 - - -1.79 - -4.64 -
-0.96 0.11 -0.35 0.16 0.4 0.33 0.63 0.62 1.09 1.34 1.51 1.48 -0.57 -3.24 -2.68 -2.99 -1.28 -1.76 -2.28 -2.03 -2.29 -6.32 -0.53 1.03 -0.36 -0.71
-0.88 -0.36 -0.25 -0.04 0.02 0.68 0.38 0.37 0.81 1.52 1.75 1.25 -0.64 -2.75 -2.59 - -1.44 -0.44 -1.23 -0.94 -1.02 0.67 -4.12 -1.39 -0.47 0.06
0.52 0.64 0.31 0.37 0.12 -0.16 0.16 0.38 0.99 0.76 1.12 1.05 0.45 -2.08 -1.18 -1.81 -1.4 -0.67 -1.03 -1.41 -3.43 -1.9 0.67 0.02 -0.81 -1.25
0.18 0.45 0.46 0.37 0.12 -0.39 -1.47 -0.39 0.14 1.33 2.18 2.14 -0.53 - -3.71 -2.15 - -1.5 -1.47 -1.09 0.17 -4.02 -0.59 -0.95 -0.71 -2.55
0.75 0.68 0.38 0.54 0.21 -0.24 0.07 0.29 0.75 0.63 1.05 0.92 0.43 -2.52 -1.6 -2.85 -1.13 -0.32 -0.54 -0.39 -3.33 -1.91 0.3 0.0 -0.49 -1.04
0.13 -1.66 -0.9 -0.38 0.24 0.42 1.02 1.15 0.67 1.32 1.33 1.01 0.2 -0.24 -3.16 -4.86 -1.28 -2.42 -3.92 0.07 -3.22 -1.89 -0.9 -0.15 -0.07 0.35
0.07 -1.39 -0.59 -0.34 0.03 0.66 1.11 1.1 0.92 1.38 1.44 0.92 0.54 -0.43 -3.69 -4.32 -1.81 -2.65 -3.02 -0.09 -3.99 -1.83 -1.51 -0.27 -0.64 0.18

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.