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Heatmap: Cluster_22 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
-3.71 -4.8 -3.08 -1.59 -0.88 0.18 0.53 -0.12 1.4 -0.03 -0.51 -0.96 -3.03 1.17 1.56 1.54 0.3 0.0 0.08 -0.28 -4.55 0.13 -0.13 -1.25 -0.06 -0.35
-3.1 -3.24 -2.8 -2.6 -2.13 -0.45 0.02 -0.8 1.21 0.25 -0.12 -0.69 -3.7 1.8 1.44 1.14 -0.04 -0.32 -0.44 -0.19 -3.43 -1.86 1.17 0.1 0.01 0.39
-4.79 -4.99 -3.15 -1.48 -0.51 0.19 0.76 0.44 1.28 0.68 0.5 -0.13 -4.03 0.9 1.49 0.42 -0.06 0.07 -0.17 -0.89 -3.78 -0.51 0.48 -0.23 0.07 -0.69
-2.69 -1.66 -1.3 -0.51 -0.12 0.14 0.52 -0.13 1.04 -0.39 -0.84 -1.05 -2.54 0.92 1.19 0.73 0.28 0.19 -0.05 -0.76 -2.56 0.56 0.83 -0.38 0.17 -0.03
-1.45 -0.37 -0.26 -0.1 0.3 0.59 0.56 0.06 0.22 -0.59 -1.05 -1.4 -1.58 1.11 1.38 0.83 0.31 0.48 0.18 -0.36 -1.68 0.11 -0.64 -1.33 -0.46 -0.8
-6.52 -6.76 -5.39 -3.75 -2.13 -0.01 0.6 -0.26 0.82 0.06 -0.6 -1.76 -7.09 2.1 1.89 1.69 0.86 0.15 -0.16 -0.85 -5.42 -0.38 -1.71 -1.77 -0.19 -0.59
-4.49 -4.4 -3.61 -2.84 -1.61 -0.53 0.09 -0.61 0.76 -0.44 -0.94 -1.58 -4.14 1.86 2.06 1.02 0.53 0.4 0.19 -0.66 -0.54 -0.24 0.19 -0.33 0.09 -0.5
-0.97 -0.85 -0.82 -0.48 -0.13 0.09 0.24 -0.29 0.37 -0.33 -0.27 -0.31 -1.07 1.37 1.3 0.58 0.2 0.13 -0.33 -0.48 -1.36 -1.21 0.24 -0.22 0.31 0.1
-3.94 -3.08 -2.43 -1.77 -1.24 -0.48 0.15 -0.1 0.19 0.18 0.07 -0.54 -3.11 1.83 2.16 1.0 -0.46 -0.82 -0.93 -1.44 -2.7 0.56 0.67 -0.32 0.16 -0.58
-0.41 -0.67 -0.69 -1.04 -1.17 -0.65 -0.11 -0.2 -0.03 0.12 -0.25 -0.09 -0.46 1.5 1.17 1.0 0.22 0.05 0.32 0.17 -1.32 -2.11 -0.51 -0.81 -0.0 0.57
-2.46 -1.53 -1.29 -1.33 -1.24 -1.07 -0.52 -0.55 0.46 -0.17 -0.2 -0.56 -2.71 1.07 1.76 1.06 0.86 0.79 0.19 -0.02 -2.71 -3.25 0.84 0.43 -0.31 -0.05
-2.45 -4.72 -5.23 -4.22 -4.8 -2.46 -0.5 -0.66 -0.59 -0.88 -0.82 -1.47 -1.56 2.44 2.57 1.29 0.86 0.32 -0.35 -1.52 -4.95 -1.06 0.6 -1.76 -0.22 -1.0
-3.09 -7.14 -5.23 -2.09 -1.03 -0.38 0.33 0.19 0.74 0.7 0.27 -0.29 -2.37 1.2 1.72 0.02 0.3 -0.24 -0.51 -0.0 -3.95 -0.79 0.31 0.26 0.58 0.59
-2.11 -2.15 -2.1 -1.94 -1.4 -0.49 0.11 -0.7 0.7 -1.28 -1.74 -2.14 -2.24 1.87 2.52 1.66 0.46 -0.26 -0.25 -0.9 -1.22 -0.53 -1.29 -1.22 -0.23 -0.91
-0.54 -0.23 -0.64 -1.07 -2.1 -2.07 -0.81 -0.59 0.98 0.33 0.1 -0.16 -0.59 -0.06 0.8 0.77 0.41 0.94 0.89 0.1 -2.44 -1.13 0.32 0.15 0.44 -0.25
-2.01 -2.92 -2.83 -2.39 -2.28 -1.08 -0.3 -0.28 -0.12 0.22 -0.29 -1.16 -1.77 1.44 1.59 0.27 0.77 0.22 -0.33 -0.52 -2.82 -0.37 1.72 -0.01 0.6 0.42
-3.68 -1.93 -1.64 -1.01 -0.07 0.53 0.19 -0.95 -0.35 -2.31 -2.92 -3.6 -4.1 1.09 1.93 1.73 1.47 1.0 0.68 -0.0 -7.69 0.45 -2.33 -2.26 -0.6 -1.06
-1.68 -2.12 -3.27 -3.15 -2.02 -1.77 -1.79 -1.98 -2.64 -2.7 -2.91 -3.42 -1.76 1.94 3.15 2.35 -1.19 0.24 -0.07 -1.5 -2.73 0.41 -2.31 -2.91 -1.18 -1.71
-3.51 -3.32 -3.65 -2.38 -1.41 -0.39 -0.06 -0.98 1.14 0.37 -0.19 -0.88 -4.4 1.25 1.15 1.22 0.93 0.89 0.99 0.22 -2.77 -2.28 0.82 -0.59 -0.64 -0.47
0.27 -0.61 -1.87 -1.66 -2.12 -1.34 0.17 0.36 0.46 0.31 0.27 -0.53 0.27 1.48 1.9 0.81 -0.34 -0.27 -0.19 -1.14 -2.86 -0.99 -1.02 -1.86 0.47 -0.38
-6.23 -5.28 -5.43 -4.41 -2.79 -0.34 0.45 -0.82 1.31 -0.88 -1.87 -3.16 -8.25 2.16 2.91 1.28 0.55 -0.33 -0.43 -1.29 -4.0 -2.63 -1.22 -1.24 -1.23 -1.85
-0.81 -0.17 -0.25 -0.12 -0.11 -0.5 0.17 -0.13 0.79 0.01 -0.04 -0.32 -0.86 0.45 0.45 0.17 0.42 0.18 0.28 -0.32 -1.8 0.88 0.09 0.09 -0.36 -0.58
-4.84 -3.21 -1.83 -1.36 -0.22 0.48 0.41 -0.83 -0.43 -0.11 -1.15 -1.41 -5.09 1.69 1.86 1.43 0.94 0.25 0.18 0.21 -2.35 -4.85 0.02 -0.66 -0.8 0.18
-4.75 - -1.4 -0.81 -0.88 -0.34 0.68 0.51 0.61 -0.14 -0.19 -0.89 - 0.92 1.69 1.2 0.75 0.39 0.48 0.19 -6.38 -0.55 -0.2 -3.55 -0.08 0.31
-2.91 -2.35 -2.37 -1.94 -0.87 -0.09 0.04 -0.63 0.75 -0.1 -0.47 -0.95 -2.57 1.7 1.25 1.18 0.51 0.51 -0.14 -0.4 -1.8 0.51 -0.06 -0.42 0.2 0.07
-2.34 -1.91 -1.78 -1.72 -2.55 -1.16 0.13 -0.81 1.04 -0.76 -0.96 -1.39 -0.89 1.73 2.82 0.6 0.81 -1.04 -0.93 -1.43 -1.74 -1.1 0.28 -1.05 -0.78 -1.01
-3.52 -2.96 -1.72 -1.48 -0.03 1.07 0.57 -0.46 0.55 -0.55 -0.99 -1.17 -3.83 0.88 1.47 1.21 0.23 0.37 0.38 -0.67 -1.44 -0.13 0.35 0.41 -0.57 -0.33
-3.47 -1.27 -0.18 -0.03 -0.02 0.05 0.35 0.17 0.51 0.26 0.08 -0.34 -3.65 0.63 0.83 0.58 0.15 0.62 0.29 -0.02 -2.18 0.13 0.0 -0.25 -0.35 0.06
-0.71 -1.32 -1.18 -1.08 -0.8 -0.59 0.12 0.04 0.24 0.03 -0.21 -0.27 -0.48 1.14 1.19 1.08 -0.0 0.09 -0.33 -0.42 -0.94 0.8 0.29 -0.35 -0.21 -0.4
-1.1 -1.42 -1.14 -0.86 -0.56 -0.55 0.25 -0.24 0.73 0.12 -0.25 -0.71 -1.51 1.07 0.98 0.92 0.27 0.58 0.29 -0.19 -0.27 -0.68 0.32 -0.05 -0.53 0.12
-0.85 -1.36 -1.13 -0.73 -0.27 0.13 0.37 -0.1 0.87 0.07 -0.2 -0.44 -1.38 0.97 0.98 0.87 -0.03 0.4 0.33 -0.23 -0.32 -1.53 0.08 0.08 -0.66 -0.11
-1.03 -1.15 -0.58 -0.66 -0.81 -0.71 -0.47 -0.43 0.35 0.28 0.09 -0.1 -0.64 0.58 1.2 0.97 0.22 0.62 0.46 0.16 -1.32 0.83 -0.63 -0.85 -0.36 -0.21
0.04 -0.67 -0.45 -0.32 -0.77 -0.88 0.22 0.66 0.19 0.36 0.28 0.03 0.01 0.98 1.32 -0.02 0.06 -0.34 -0.97 -0.02 -1.42 -2.06 -0.55 -0.75 0.46 0.27
-0.26 -0.84 -0.61 -0.54 -0.92 -0.99 0.13 0.47 -0.08 0.23 -0.01 -0.2 -0.35 1.17 1.47 0.08 0.25 0.41 -0.7 0.26 -1.39 -2.85 -0.67 -0.86 0.44 0.61
-2.17 -0.93 -0.57 -0.4 -0.14 0.1 0.31 0.12 0.59 0.01 -0.29 -0.61 -1.68 0.63 1.24 0.55 0.42 0.69 0.49 -0.04 -1.31 -0.29 0.15 -0.36 -0.25 -0.79
-1.71 -1.13 -1.45 -1.55 -1.01 -0.23 0.45 0.04 0.51 -0.43 -1.14 -1.81 -2.04 1.37 1.91 0.96 0.71 1.29 0.77 0.26 -4.51 -1.4 -1.23 -1.53 -0.51 -1.15
-2.77 -1.25 -0.72 -0.67 -0.36 0.16 0.7 0.61 0.61 -0.0 -1.07 -2.07 -2.96 1.11 2.1 0.72 0.51 0.75 0.55 0.51 -4.84 -1.56 -1.51 -2.39 -0.99 -1.75
-4.84 -3.95 - -1.35 -0.13 1.18 0.83 -1.83 0.72 0.07 -0.66 -1.07 -5.72 0.88 1.33 1.29 0.57 0.06 -0.16 -1.09 -1.13 -1.79 0.58 0.96 0.19 -1.3
-3.44 -1.3 -0.51 -0.37 -0.1 0.36 0.77 0.27 0.51 -0.86 -2.11 -3.01 -3.52 1.19 2.0 0.84 0.69 0.82 0.63 0.55 -2.01 -0.84 -1.82 -3.29 -1.02 -1.52
-0.24 -0.56 -0.22 0.03 -0.21 -0.48 0.12 0.48 -0.14 0.05 0.05 -0.08 -0.14 0.94 0.91 0.44 -0.13 0.09 -0.34 -0.09 -0.76 -0.69 -1.1 -0.82 0.46 0.31
-0.55 -0.76 -0.99 -1.01 -0.71 -0.62 -0.03 -0.2 0.01 -0.01 -0.2 -0.34 -0.27 1.48 2.15 0.61 -0.02 -0.14 -0.54 -0.76 -3.46 -0.85 -0.24 -0.71 0.51 -0.57
-2.53 -1.27 -0.98 -0.13 0.35 0.69 0.85 0.27 0.54 -0.31 -0.76 -1.33 -3.59 1.14 0.84 1.0 0.22 0.34 0.44 -0.03 -3.73 -0.78 -0.04 -0.52 -0.42 -0.11
-4.77 -2.8 -1.62 -1.21 -0.72 0.3 0.74 -0.17 0.85 -0.83 -1.34 -1.91 -5.38 2.17 1.86 1.69 0.67 -0.35 -0.39 -0.7 -5.07 -2.6 -1.26 -2.23 -0.2 -0.32
-2.93 -0.79 -0.95 -0.65 0.1 0.47 0.3 -0.86 -0.58 -1.83 -2.23 -2.88 -3.19 1.46 1.76 1.21 1.1 1.2 1.03 0.3 -6.69 -0.66 -1.71 -2.36 -0.62 -0.9
-2.87 -0.89 -0.9 -0.52 -0.02 0.15 0.42 -1.03 -0.63 -1.73 -2.57 -2.93 -3.47 1.56 1.52 1.23 1.15 1.56 0.76 0.12 -6.82 -0.42 -1.06 -1.98 -0.23 -1.33
-0.6 -0.57 -0.76 -0.57 -0.29 0.01 0.35 -0.01 0.25 -0.33 -0.61 -0.88 -0.8 0.92 0.86 0.6 0.68 0.57 0.32 0.11 -2.71 0.54 -0.28 -0.28 0.01 -0.61
-0.85 -1.09 -1.08 -0.96 -0.93 -0.62 -0.42 -0.42 -0.05 0.0 -0.14 -0.31 -1.0 1.48 1.02 1.15 0.41 0.07 0.27 0.01 -0.66 -0.44 0.72 -0.14 -0.62 -0.12
-1.78 -1.11 -0.35 0.09 0.34 0.23 0.45 0.14 0.16 0.12 -0.42 -0.82 -1.57 0.52 1.25 0.82 0.26 0.69 0.36 0.32 -3.11 0.05 -0.88 -1.01 -0.16 -0.66
-1.35 -1.72 -1.92 -2.07 -1.86 -1.4 -0.84 -0.97 -0.64 -0.78 -1.02 -1.14 -0.98 1.55 1.93 1.86 0.02 1.16 0.21 -0.74 -2.97 0.95 -0.31 -0.7 -0.2 -0.56
-4.37 -2.12 -1.28 -1.23 -0.41 -0.12 0.18 -0.19 0.29 -0.11 -0.46 -0.57 -4.37 1.58 1.29 1.21 0.59 0.73 0.2 -0.2 -2.56 -1.86 0.25 -0.4 0.24 0.12
-4.12 -3.16 -2.36 -1.35 -0.35 0.34 0.62 0.24 1.04 0.31 0.01 -0.31 -3.94 0.74 1.59 0.89 0.29 0.34 -0.18 -0.33 -2.13 -0.37 0.23 -0.01 -0.42 -0.53
-3.71 -3.89 -2.86 -1.92 -0.87 0.09 0.83 0.46 1.17 0.64 0.25 -0.2 -2.52 0.73 1.57 0.98 0.24 0.05 -0.36 -0.37 -2.44 -0.02 -0.27 -0.22 -0.27 -0.77
-2.82 -4.2 -3.69 -3.77 -3.2 -4.74 -2.42 -1.7 -1.19 -0.76 -0.61 -1.2 -3.21 2.17 3.41 2.32 -4.54 -1.48 -2.15 -3.25 -4.16 -0.6 -1.88 -2.51 -0.72 -3.1
-5.12 -2.91 -1.7 -1.48 -1.13 -0.67 -0.53 -0.81 0.67 0.41 0.16 -0.26 -3.93 1.2 2.12 0.8 0.88 0.06 -0.18 -0.33 -1.53 -0.38 -0.26 -0.49 0.31 0.06
-2.69 -2.12 -1.43 -1.24 -1.05 0.01 0.58 -0.18 0.62 -1.42 -2.1 -2.59 -3.01 2.5 2.44 1.28 0.21 -0.4 -0.12 -0.58 -5.87 -1.19 -2.64 -3.41 -1.15 -1.48
-0.77 -0.53 -0.83 -0.7 -0.99 -1.13 -0.14 -0.41 -0.1 -1.06 -1.42 -1.38 -1.24 1.67 1.76 0.93 -0.04 0.19 0.26 -0.87 -2.2 -0.76 0.81 -0.38 0.36 0.46
-1.74 -1.55 -1.55 -1.43 -1.14 -0.33 0.44 -0.05 1.33 0.02 -0.26 -0.58 -1.88 0.4 1.21 0.62 0.57 0.78 0.64 -0.08 -3.12 -0.49 0.69 -0.09 -0.11 -0.79
-4.55 - -6.57 -3.92 -2.76 -1.33 -0.47 -1.48 1.16 -0.98 -1.55 -2.01 -6.17 1.73 2.36 0.59 0.67 1.32 0.57 -1.58 -0.77 -1.9 1.68 -0.63 -2.13 -3.46
-3.95 -1.89 -1.36 -1.39 -2.4 -1.22 -0.26 -0.97 1.52 0.24 -0.37 -0.27 -4.83 1.25 1.73 0.84 0.79 0.5 0.12 -0.91 -2.96 -0.16 -0.46 -0.99 0.38 0.54
-4.58 -4.8 -3.91 -2.52 -1.34 -0.09 1.0 -0.11 1.17 -0.87 -1.79 -2.78 -4.42 2.46 2.38 1.4 0.5 -0.39 0.03 -1.09 -6.38 -1.39 -2.7 -3.09 -1.67 -2.93
-4.77 -4.94 -3.89 -2.69 -1.51 -0.41 0.9 -0.06 1.05 -0.81 -1.75 -2.93 -4.55 2.57 2.32 1.61 0.66 -0.39 -0.17 -0.98 -6.09 -1.72 -2.54 -2.87 -2.12 -3.39
-1.54 -1.25 -1.16 -1.01 -0.66 -0.41 -0.73 -1.41 -1.1 -0.84 -0.6 -0.55 -0.98 1.12 1.97 1.75 1.42 -0.09 0.11 0.2 -2.42 -1.42 -1.53 0.14 -0.26 -0.15
-3.72 -4.74 -3.92 -3.3 -3.07 -1.72 -0.19 -1.01 1.44 0.52 0.3 -0.17 -3.1 1.48 1.48 0.61 0.31 0.3 0.09 -0.21 -2.49 -0.82 1.14 0.1 0.11 -0.08

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.