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Heatmap: Cluster_135 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
0.27 -0.94 -1.03 0.24 0.42 0.15 0.69 0.98 1.18 1.21 1.56 1.06 0.07 -2.58 -4.35 -3.98 -1.74 -1.05 -1.7 -1.14 -4.68 -1.42 -0.74 -0.04 0.29 -0.21
0.12 -0.55 -0.33 -0.16 -0.07 0.24 0.72 0.91 0.8 1.04 0.96 0.74 0.25 -3.0 -2.54 -4.03 -2.09 -0.07 -0.86 0.1 -1.02 -0.86 -0.06 -0.49 0.42 0.1
-0.1 -1.56 -0.62 0.17 0.1 -0.32 0.32 0.67 0.68 0.92 1.63 1.56 -0.19 -1.95 -3.11 -2.66 -1.97 -0.37 -0.92 -0.71 -5.41 -2.93 -0.46 0.25 0.7 0.51
-0.32 -1.19 -1.13 -1.95 -2.46 -1.01 0.04 0.22 0.95 1.25 1.47 1.38 -0.24 -1.24 -0.47 -1.51 0.1 -0.09 -0.16 -0.11 -4.65 -1.36 0.12 1.28 -0.37 -0.74
-0.26 -3.49 -3.42 -1.16 -1.49 -1.4 -0.21 -0.01 0.36 1.23 1.86 1.22 -0.26 -0.01 -4.26 -0.46 -2.2 -0.73 -1.66 -2.41 -3.78 -1.2 0.61 1.26 1.42 0.38
-0.46 - -2.01 -2.93 -0.88 -1.02 0.29 -1.08 1.08 1.43 2.22 1.41 -0.7 0.45 -0.84 -2.86 - -0.86 -1.65 -1.3 - -1.29 -0.45 -0.71 2.06 -2.55
0.51 -0.02 0.02 0.67 0.44 0.08 0.26 0.86 0.74 1.27 1.69 1.66 0.94 -5.14 -4.27 -4.14 -3.18 -4.06 -3.86 -2.24 -3.5 -2.51 -0.79 -2.95 0.2 -1.12
1.05 0.17 -0.31 0.73 -0.04 -0.82 -0.12 0.72 0.84 1.45 1.79 1.63 1.24 -5.78 - -3.37 -4.64 -3.73 -4.84 -3.06 -3.65 -1.8 -1.74 -1.76 -0.2 -0.76
0.1 -0.45 -0.61 -0.03 -0.36 0.46 0.89 1.17 1.1 0.9 0.67 0.63 -0.1 -1.04 -3.18 -1.89 -1.62 -0.51 -0.17 -0.21 -5.14 -1.06 -1.09 0.04 0.34 0.39
0.75 0.56 -1.22 -3.11 -3.04 -1.39 0.12 0.51 0.71 1.11 1.26 1.3 0.42 -3.24 -1.89 -2.01 -0.06 0.46 0.05 0.15 -0.42 -2.78 0.54 0.71 -2.68 -4.0
-0.68 -1.08 -0.59 0.32 -0.03 0.01 0.53 1.11 1.11 1.17 1.02 0.96 -0.29 -1.74 -2.6 -1.58 -1.59 -0.53 -0.89 -0.52 -1.16 -0.52 0.18 -1.01 0.21 0.3
0.88 -0.86 -0.48 -0.44 -0.96 -0.4 0.43 1.07 0.89 0.81 0.83 0.65 1.06 -3.3 -2.05 -1.79 -0.71 -0.01 0.13 0.38 -1.56 -1.6 -1.3 -1.04 0.12 0.15
-1.33 -1.74 -1.41 -1.99 -2.47 -1.94 -0.49 0.07 0.46 1.0 1.14 1.23 -0.93 -2.31 -1.25 -1.68 -0.39 0.94 1.03 0.67 -1.72 -3.92 0.35 1.65 0.02 -0.0
0.57 -0.59 -0.84 -0.47 -1.25 -2.05 -0.62 0.12 0.52 1.09 1.5 1.52 1.14 -0.73 -1.42 -0.85 -1.82 -0.6 -1.1 -1.53 -1.41 0.01 -0.02 0.1 0.25 -0.34
-0.31 -0.17 -0.36 0.17 0.08 -0.13 0.17 0.64 0.79 0.93 1.14 1.11 -0.06 -1.75 -1.49 -1.08 -1.17 -0.05 -0.15 -0.65 - -2.27 -0.54 -2.41 1.33 0.16
0.57 0.5 0.14 0.38 -0.07 -1.0 -0.57 -0.25 0.32 0.77 1.35 1.24 0.74 -0.94 -2.45 -0.61 -1.46 -2.08 -2.14 -1.42 -2.21 0.78 -0.85 -0.15 0.2 0.12
0.87 0.21 -0.13 0.74 0.2 -1.13 -0.44 -0.43 0.52 1.03 1.6 1.33 0.9 -1.77 -2.61 -1.19 -2.36 -3.1 -1.89 -2.85 -2.27 0.25 -1.4 0.33 -0.1 -0.16
-0.52 0.03 -0.22 0.34 0.22 -0.35 0.18 0.36 1.05 1.34 1.71 1.5 -0.1 -0.64 -1.03 -1.48 -1.18 -1.69 -2.97 -1.8 -5.47 -6.62 -2.53 -0.01 0.37 0.03
1.31 -0.12 -0.17 0.18 -0.35 -1.89 -0.99 -0.07 0.03 0.56 1.35 1.5 1.53 -1.19 -1.92 -1.05 -2.06 -1.86 -2.37 -1.85 -1.0 -0.36 -0.56 0.08 0.26 -0.11
0.51 -0.22 -0.88 -1.06 -1.31 -1.38 -0.51 -0.11 0.4 1.08 1.5 1.6 1.18 -1.29 -1.17 -1.28 -1.22 -0.63 -0.84 -0.74 -3.71 -0.44 -0.06 -0.1 0.68 -0.15
1.29 0.22 -0.26 -0.63 -1.48 -1.76 -0.52 0.21 0.17 0.78 1.12 1.19 1.27 -0.76 -1.18 -1.52 -0.97 -0.63 -0.92 -0.86 -1.51 -0.37 -0.64 0.23 0.07 0.15
-0.26 -0.76 -1.54 -0.78 -1.29 -2.02 -0.62 0.06 0.99 1.22 1.41 0.79 -0.47 -1.45 -1.76 -1.22 -1.91 0.02 -0.3 -1.16 -2.47 0.79 0.75 0.77 1.13 -0.38
1.02 0.65 -0.6 -2.69 -3.95 -3.97 -1.7 0.16 0.66 1.04 1.42 1.36 0.75 -2.88 -0.77 -2.72 -1.15 0.39 0.12 -0.6 -0.52 -2.66 0.37 1.12 -0.79 -2.34
-3.59 -2.38 -0.87 0.19 0.54 -0.13 -0.05 0.12 0.63 0.99 1.14 0.98 -2.02 -0.13 0.05 -0.05 0.16 -0.22 -0.35 -1.23 -3.3 -2.31 -0.44 -0.01 1.36 -0.06
-0.12 -0.76 -0.85 -0.35 -1.16 -1.46 -0.69 0.67 1.16 1.42 1.48 0.81 -0.03 -0.93 -1.0 -0.78 -1.3 -0.43 -0.6 -0.89 -3.42 0.58 -0.28 -0.12 0.1 0.44
-1.65 -1.97 -1.6 -1.39 -0.93 -0.71 -0.04 0.12 1.44 1.86 1.77 1.09 -2.23 -1.5 -1.59 -2.07 -0.57 0.04 -0.82 0.06 -3.28 0.18 -0.02 -0.37 -0.07 0.3
0.05 0.5 0.21 0.2 -0.81 -0.81 0.1 0.59 0.53 0.69 1.11 1.19 0.75 -1.32 -1.72 -1.05 -0.27 -1.61 -1.17 -1.37 -3.12 -0.14 0.19 -0.12 0.35 -0.27
-0.12 -1.05 -1.09 -0.64 -0.33 -0.21 0.32 0.43 0.38 0.76 0.8 0.59 0.68 0.35 -0.61 -0.62 -0.78 -0.57 -0.95 -1.07 -0.75 -0.1 0.47 0.44 0.51 -0.22
-1.69 -1.6 -1.26 -0.62 -0.49 -0.62 -0.18 0.29 1.04 1.43 1.9 1.53 -1.03 -0.88 -1.64 -0.87 -0.61 -0.7 -0.82 -0.81 -3.99 -1.65 -0.14 0.45 0.3 0.32
0.31 -0.81 -1.07 -0.29 -0.57 -0.72 0.11 0.62 0.79 1.19 1.42 1.09 0.56 -1.48 -2.36 -1.77 -1.86 -1.48 -1.55 -0.94 -3.76 0.7 0.12 -0.01 0.65 0.04
-0.43 -1.03 -0.79 0.08 0.03 -0.3 0.39 0.32 0.54 0.52 0.83 1.21 -0.36 -0.96 -1.41 -1.24 -1.21 -0.0 -0.18 -1.13 -1.83 0.27 0.51 0.65 0.69 -0.31
-0.01 -1.04 -1.0 -0.01 -0.38 -1.17 0.32 0.34 1.23 1.38 1.39 1.19 0.08 -1.14 -1.19 -0.58 -1.6 -0.78 -1.07 -0.82 -4.29 -0.59 0.36 -0.42 0.28 -0.15
0.51 -0.09 -0.9 0.16 0.29 0.47 0.7 0.71 0.74 0.91 0.69 0.5 0.41 -2.16 -1.14 -2.44 -1.35 0.09 -0.13 -0.92 -2.14 -2.56 -0.06 -0.07 0.37 -0.24
-0.17 -0.39 -0.46 0.75 0.47 -0.43 0.33 0.82 0.81 1.19 1.45 0.77 -0.2 -0.45 -1.28 -0.22 -3.13 0.11 -1.67 -3.45 -3.53 -1.65 -2.51 0.72 -0.26 -0.33
0.03 -0.65 -0.83 0.56 -0.16 -0.93 0.44 0.64 1.37 1.06 1.69 0.85 0.28 -0.59 -0.22 0.06 -1.78 0.02 -1.36 -0.76 -3.03 -3.87 -2.6 -2.6 -0.69 0.11
-1.7 -1.36 -1.26 -1.59 -0.79 -0.53 0.83 0.77 1.41 1.53 1.28 0.69 -1.3 -0.88 -1.14 -0.78 -0.08 -0.56 -0.67 -0.12 -3.44 -0.28 -0.47 -0.05 -0.01 0.51
0.94 0.17 -0.07 0.21 -0.08 -0.67 0.03 0.45 0.56 0.73 1.13 1.0 0.92 -1.35 -1.15 -1.15 -0.88 -0.25 -0.76 -0.79 -5.51 -0.41 -0.48 -0.49 0.08 -0.76
-1.76 -1.63 -4.09 -1.04 -0.82 -2.49 -1.0 -2.0 0.63 1.99 2.42 1.62 -0.32 - - - -4.12 - - - -2.09 -0.75 0.75 0.65 1.69 0.3
-0.25 0.15 -0.14 -0.27 -0.96 -1.49 0.27 0.48 0.76 0.95 1.16 1.22 -0.12 -1.38 -0.8 -1.12 -0.34 0.33 -0.17 -0.4 -6.2 -0.65 -0.72 0.16 0.64 -0.53
-0.05 -0.27 -0.5 -0.31 -1.41 -2.1 -0.09 0.58 0.79 0.81 1.51 1.21 0.2 -1.29 -1.09 -1.52 -0.8 -0.41 -0.26 -1.1 -4.19 -0.55 0.01 0.67 0.87 -0.27
-0.9 -0.5 -1.92 -0.37 -0.21 -0.49 0.59 0.88 1.62 1.52 1.96 1.1 -0.72 -2.21 -4.64 -2.87 -2.4 -2.51 -2.11 -1.8 - -2.59 0.12 -0.14 1.16 -0.89
-0.99 0.06 0.19 0.39 0.37 -0.14 0.65 0.9 1.05 1.27 1.36 1.08 -0.62 -0.78 -0.7 -0.23 -1.57 -1.32 -2.1 -0.81 -2.66 -4.49 -2.34 -1.05 0.32 -0.24
-0.38 -0.12 -0.56 -0.62 -0.33 -0.35 -0.3 -0.29 0.53 0.93 1.54 1.56 -1.18 -2.75 -1.41 -2.38 -0.85 0.2 -0.63 0.02 - -2.31 -0.23 1.73 -0.24 -0.32
0.61 0.22 0.14 -0.13 -0.59 -0.75 0.35 0.47 0.5 0.81 0.93 0.95 1.34 -0.5 -1.55 -0.41 -2.08 -1.53 -2.28 -0.84 -3.89 0.2 -1.06 0.19 -0.33 0.09
0.98 0.23 -0.66 -1.22 -1.28 -0.64 0.32 0.51 0.88 1.29 1.5 1.66 1.06 -2.05 -2.08 -0.92 -0.53 -0.37 -0.58 -0.8 -3.15 -2.91 -0.88 -0.44 -1.8 -2.71
0.57 0.01 -0.35 -1.09 -1.73 -1.52 -0.27 0.57 0.88 1.31 1.43 1.44 0.81 -3.57 -1.41 -2.08 -0.39 -0.06 -0.47 0.16 -0.97 -2.85 -0.18 0.41 -1.25 -1.9
0.22 -0.2 -0.16 0.24 -0.15 -0.14 0.43 0.72 0.56 0.5 0.99 0.75 -0.1 -1.3 -0.85 -0.73 -1.06 -0.08 -0.21 -0.6 -3.14 -0.78 -0.69 0.11 0.8 -0.09
0.12 -0.01 -0.59 -0.03 0.53 -0.22 0.42 0.6 0.88 0.92 1.16 0.85 -0.04 -0.21 -0.83 -0.6 -0.62 -0.2 -1.04 -1.99 -4.13 -2.82 -0.15 0.25 0.1 -0.56
-0.02 -3.29 -2.66 -1.81 -1.98 -1.79 0.6 0.93 1.46 2.04 2.0 1.0 0.43 -1.91 -1.95 -1.28 -1.8 0.04 -0.69 0.09 -4.97 -4.43 -1.05 -1.01 -0.92 -0.36
1.01 -0.53 -2.25 -3.24 -2.1 -0.71 0.93 1.26 1.09 1.44 1.26 1.2 1.02 -3.54 -2.29 -3.6 -1.27 0.07 -0.51 0.31 -3.8 -5.73 -0.22 0.06 -1.75 -2.22
0.44 -0.35 -1.01 -0.62 -0.31 -0.12 0.62 0.77 0.93 1.21 1.27 0.84 0.25 -2.55 -3.57 -3.55 -1.37 -0.53 -1.22 -0.64 -2.04 -0.13 -0.14 -0.1 0.6 0.17
-0.67 -0.58 -0.65 0.27 0.12 -0.12 0.44 0.36 0.97 0.91 1.32 0.99 -0.23 -0.91 -0.71 -2.57 -0.76 -0.24 -0.09 0.3 -5.06 -2.12 -0.12 0.37 -0.65 0.02
-0.13 -1.69 -1.24 -0.34 -0.17 -0.9 0.01 0.26 0.88 1.25 1.75 1.26 -0.45 -0.31 -1.5 -1.18 -1.84 -0.97 -0.61 -0.89 -2.99 -0.92 -0.12 0.32 0.71 0.22
0.7 -0.06 -0.05 0.01 -0.18 -0.85 -0.05 0.23 0.27 0.81 1.22 1.16 1.14 -1.39 -1.78 -1.84 -1.01 -1.07 -1.02 -0.83 -3.89 -0.53 -0.46 0.2 0.59 0.04
0.54 -0.26 -0.31 0.31 0.35 0.45 0.43 0.64 0.72 0.81 1.05 0.93 0.46 -1.29 -1.94 -1.57 -1.55 -0.93 -1.03 -0.73 -2.79 -0.26 -1.56 -0.4 0.27 0.16
0.91 -0.08 -0.27 -0.14 -0.17 -0.17 -0.06 0.21 0.53 0.63 0.98 0.95 0.84 -1.1 -1.25 -1.24 -0.75 -1.37 -0.35 -0.58 -2.49 -0.76 -0.64 0.29 0.21 0.41

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.