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Heatmap: Cluster_78 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
-1.95 -1.34 -0.85 -0.46 -0.54 -0.66 -0.24 -0.21 -0.22 -0.08 -0.33 -0.45 -1.24 0.19 -0.36 0.27 -0.39 0.32 -0.16 -0.27 0.23 1.2 1.29 0.59 0.67 0.5
-0.72 -0.71 -0.8 -0.2 -0.13 -0.52 -0.19 -0.06 0.13 0.2 0.37 0.28 -0.47 -0.2 -0.17 -0.19 -0.71 -0.03 -0.39 -0.95 0.46 0.73 1.1 0.6 0.18 0.11
-0.68 -0.51 -0.71 -0.43 -0.06 -0.59 -0.44 -0.31 -0.26 -0.07 0.14 0.04 -0.74 -0.03 -0.05 0.41 -0.78 -0.14 -0.17 -0.84 0.64 0.71 1.39 0.87 -0.46 0.09
-0.31 -1.13 -1.53 -0.53 -0.43 -1.14 -0.04 0.08 0.0 0.1 0.29 -0.02 -0.16 -0.59 -1.27 -0.62 -1.14 -0.63 -1.18 -1.34 0.92 0.82 1.75 0.74 0.92 0.08
-1.36 -0.46 -0.21 -0.17 -0.82 -1.58 -1.46 -1.19 -0.94 -0.41 -0.19 0.12 -0.9 -0.29 -0.58 -0.35 0.02 -0.23 -0.75 -0.93 0.59 1.21 1.68 0.8 0.92 0.79
-2.43 -1.82 -1.71 -0.61 -0.67 -0.84 -0.7 -0.46 -0.06 -0.09 0.13 0.11 -2.0 -0.96 -0.44 -0.66 -1.17 -0.37 -0.42 -1.3 1.04 0.73 2.1 1.12 0.77 0.64
-1.29 -1.08 -1.3 -0.45 -1.01 -0.78 -0.45 -0.85 0.18 -0.21 -0.4 -0.55 -1.05 0.43 0.12 -0.13 -0.75 0.4 0.36 -0.6 0.42 0.27 1.56 0.71 0.58 0.89
-2.2 -2.91 -1.48 -0.82 -0.54 -0.42 -0.53 -0.55 -0.44 -0.07 -0.32 -0.54 -1.62 0.09 0.07 0.41 -0.11 0.01 0.16 -0.11 0.34 0.82 1.58 1.04 0.58 0.51
-0.89 -0.93 -0.91 -0.38 -0.43 -0.73 -0.87 -0.76 -0.38 -0.34 -0.13 0.06 -0.94 -0.21 -0.19 -0.24 -1.27 0.48 -0.46 -1.61 0.68 0.56 1.5 1.37 1.02 0.2
-3.08 -2.17 -0.94 -0.21 -0.28 -0.78 -0.38 0.02 -0.02 0.21 0.13 -0.16 -2.31 -0.72 0.13 -0.58 -0.28 0.37 0.14 -0.15 0.6 0.19 1.48 0.82 0.66 0.55
-3.31 -1.73 -1.22 -0.02 -0.16 -0.53 -0.29 -0.12 0.2 0.32 0.43 -0.0 -3.01 -0.25 -0.74 -0.15 -0.79 -0.63 -0.4 -0.77 1.29 0.36 1.61 0.91 0.35 0.18
-1.08 -0.58 -1.45 0.37 -0.25 -1.38 -0.98 -0.05 -0.13 -0.22 0.03 -0.78 -1.22 -0.8 -0.83 -0.1 -1.68 -0.03 -0.38 -2.8 0.89 1.15 1.44 1.17 1.02 0.46
-1.59 -1.22 -1.42 -0.49 -0.77 -1.58 -1.03 -0.54 -0.66 -0.73 -0.57 -1.09 -1.61 -0.13 -0.23 0.43 -1.04 0.15 -0.28 -1.59 1.21 1.17 1.65 0.92 1.19 0.67
-0.9 -0.92 -1.02 -0.08 -0.38 -1.32 -1.22 -0.44 -0.51 -0.18 0.0 -0.26 -1.76 0.07 -1.36 -0.27 -1.57 0.22 -0.81 -1.84 0.95 0.08 1.84 1.4 0.73 0.97
-0.95 -1.69 -2.23 -0.73 -0.5 -0.92 -0.22 -0.14 -0.36 -0.76 -0.26 -0.77 -1.8 -0.51 -0.9 0.03 -0.49 0.1 0.15 -0.51 1.05 0.87 1.33 1.09 1.01 0.9
-0.98 -0.91 -1.35 -0.81 -0.97 -0.83 -0.37 -0.78 -0.53 -0.32 -0.27 0.06 -0.73 0.39 -0.39 0.47 -0.1 0.4 0.07 -0.6 0.41 0.61 1.61 0.76 0.26 0.45
-1.47 -4.94 -3.37 -1.35 -1.72 -1.76 -0.33 -0.01 -0.15 -0.18 0.07 -1.09 -1.63 -0.35 -0.48 -0.03 -0.67 -0.33 -0.02 -0.93 0.86 0.76 1.95 0.57 1.69 0.67
-1.91 - -3.26 -2.44 -1.19 -2.99 -0.72 -0.21 -0.26 0.27 -0.31 -0.26 -1.7 -1.59 -0.07 -1.38 -1.21 0.31 0.08 -0.72 0.76 0.03 2.05 0.7 2.0 0.97
-2.95 -3.27 -2.52 -1.9 -1.19 -0.62 -0.13 -0.4 -0.11 0.01 -0.08 -0.3 -1.78 0.13 0.02 -0.02 0.08 0.14 -0.21 -0.05 0.59 0.83 1.79 1.17 0.55 0.04
-1.21 -0.74 -0.47 -0.09 0.19 0.04 -0.13 -0.05 -0.09 -0.15 0.01 -0.19 -1.0 -0.08 -0.28 -0.22 -0.74 0.37 0.15 -0.88 0.32 0.47 1.04 0.58 0.27 0.56
-1.02 -0.68 -0.67 -0.29 -0.24 -0.49 0.12 0.03 0.13 0.21 0.23 0.14 -0.72 -0.18 -0.7 -0.18 -0.87 -0.46 -0.55 -0.91 0.59 0.8 1.35 0.5 0.46 0.25
-1.4 -1.19 -1.33 -0.75 0.02 - -1.0 -2.44 -2.2 -1.39 0.24 0.35 -0.48 - - - 1.04 -1.38 -1.68 -2.65 1.24 1.42 2.19 0.91 1.27 0.96
-1.82 -1.14 -0.78 -0.16 -0.28 -0.61 -0.37 -0.16 -0.11 0.2 0.05 -0.08 -1.87 -0.08 0.3 0.13 -0.61 0.14 0.27 -0.74 0.69 0.39 1.39 0.51 0.21 0.44
-1.57 -1.75 -1.83 -0.93 -0.91 -1.36 -0.36 -0.36 -0.42 -0.38 -0.34 -0.87 -1.97 -0.54 -1.07 -0.57 -0.64 -0.1 -0.16 -0.5 1.48 0.88 1.72 1.06 1.3 0.56
-0.65 -0.44 -0.56 -0.17 0.01 -0.07 -0.15 -0.2 0.15 0.14 0.19 0.34 -0.71 -0.23 -0.46 -0.56 -0.93 -0.37 -0.57 -1.2 0.44 0.63 1.37 0.8 0.13 0.14
-1.88 -1.27 -1.32 -0.48 -0.4 -0.68 -0.29 -0.27 -0.19 -0.05 -0.06 0.01 -2.05 -0.19 -0.56 0.04 -1.0 -0.09 -0.38 -0.6 0.49 0.92 1.49 1.1 1.07 0.38
-0.72 -0.27 -0.13 -0.4 -0.71 -0.92 -0.59 -0.51 -0.23 -0.13 -0.06 0.14 -0.51 -0.56 -0.3 -0.41 -0.61 -0.32 -0.32 -0.47 0.3 0.55 1.46 0.62 1.1 0.59
-0.7 -0.58 -0.64 -0.49 -0.58 -0.78 -0.2 -0.24 -0.08 -0.04 -0.23 -0.44 -1.04 0.35 -0.2 0.37 -0.34 0.31 -0.15 -0.43 0.11 0.45 1.22 0.67 0.41 0.68
-1.0 -1.33 -0.91 -0.41 -0.23 -0.07 -0.66 -1.24 -1.43 -1.38 -0.87 -0.63 -1.04 -0.32 -3.33 -1.29 -1.82 -3.45 -3.11 -2.78 1.01 0.98 2.34 2.16 0.09 1.0
-0.67 -1.02 -0.79 -0.51 -0.03 0.2 0.58 0.36 0.23 0.11 0.08 -0.26 -0.37 0.19 -0.26 -0.23 -0.73 -0.42 -0.75 -0.82 0.0 0.39 1.4 0.12 0.35 0.16
-1.89 -2.36 -1.45 -0.66 -0.82 -0.68 -0.38 -0.81 -0.14 -0.32 0.15 0.08 -1.15 0.16 -0.37 -0.31 -0.43 -0.83 -0.51 -0.64 0.82 0.78 1.92 0.73 0.72 0.82
-3.14 -3.3 -2.83 -1.99 -1.08 0.25 0.99 0.67 0.66 -0.05 -0.41 -1.43 -3.5 0.05 -0.11 0.06 -0.55 -0.27 -0.28 -0.93 0.14 0.66 1.93 0.15 0.59 0.5
-0.76 -1.11 -1.07 -0.53 -0.46 -0.98 -0.07 -0.06 0.02 -0.21 -0.17 -0.74 -1.41 -0.18 -0.59 -0.2 -0.61 0.38 -0.16 -0.69 0.63 0.86 1.3 0.82 0.98 0.53
-0.29 -0.27 -0.35 -0.33 -0.48 -0.5 -0.09 -0.34 0.03 -0.04 -0.09 -0.05 -0.48 -0.15 -0.34 -0.37 -0.41 0.15 -0.04 -0.45 0.2 0.28 1.13 0.73 0.61 0.32
-1.45 -2.31 -2.35 -0.89 -0.92 -1.6 -1.41 -1.36 -1.1 -1.06 -0.99 -1.39 -1.86 -1.07 0.35 0.01 -0.81 -0.02 0.1 -0.82 1.45 0.8 2.05 1.38 1.26 0.48
-1.4 -1.77 -1.41 -0.79 -0.51 -0.72 -0.3 -0.27 0.1 -0.28 -0.12 -0.53 -1.8 -0.32 -0.65 -0.56 -1.76 0.14 -0.02 -2.07 0.94 0.64 1.48 1.5 1.21 0.56
-2.6 -1.26 -1.91 -1.02 -0.66 -2.92 -2.09 -2.22 -0.96 -0.44 -0.93 -0.75 -2.12 -2.05 -0.81 -2.2 - -0.84 -1.19 -4.5 1.77 1.71 2.4 0.97 1.7 0.67
0.3 -1.34 -2.04 -1.01 -0.36 -2.36 -1.3 -0.41 -1.7 -2.53 -1.77 -1.13 -1.17 -0.94 -1.03 -0.74 -1.06 -1.28 -0.04 -0.49 2.23 0.96 2.28 -0.14 1.27 -0.24
0.44 - - - -0.35 - - - - 0.66 -0.24 -0.16 - - - - - -0.84 - - 1.93 1.03 2.96 0.35 0.7 1.78
-1.15 -3.86 -2.55 -0.83 -1.29 -2.53 -1.52 -3.89 -2.29 -0.95 -0.95 -1.1 -1.87 - -4.19 -2.2 - - - -4.48 1.33 1.62 2.83 1.58 1.88 1.05
-0.89 -1.31 -1.19 -2.93 -2.29 -2.17 -2.1 -1.3 -1.35 -0.54 -0.28 -0.27 -1.33 0.58 -0.6 -0.03 -0.14 0.61 -0.13 -0.69 1.78 0.58 1.94 0.52 0.73 0.41
-0.96 -1.69 -1.9 -3.01 -2.34 -2.18 -2.27 -1.85 -1.91 -1.26 -0.65 -0.67 -1.67 0.04 -0.88 -1.15 -0.86 0.34 -0.84 -2.53 1.71 1.47 2.72 0.75 0.56 0.31
-0.06 -1.31 -1.97 -2.19 -1.79 -2.22 -1.96 -0.99 -1.52 -0.46 -0.56 -0.42 -1.68 0.22 -0.26 -0.78 -0.48 0.52 0.01 -1.62 1.83 0.23 2.36 -0.17 0.92 0.49
0.32 -0.25 -0.76 -0.65 -0.88 -1.35 -0.4 -0.19 -0.45 0.18 0.27 0.21 -0.13 0.01 -0.53 -0.78 -0.56 -0.18 -0.03 -1.29 1.21 -0.02 1.81 0.04 -0.13 -0.01
-4.38 -3.65 - - -4.88 - -4.87 - -4.09 -3.56 -5.14 - - 0.25 -0.28 0.79 0.71 0.23 0.05 -0.14 1.62 1.66 2.56 1.06 0.34 0.75
-4.22 -2.12 -1.28 -0.23 -1.17 -0.57 -0.23 -0.38 0.27 0.37 -0.29 -0.27 -2.22 -0.61 -0.68 -0.49 -0.51 0.43 -0.74 -1.2 0.56 0.87 1.87 1.26 1.07 -0.25
-0.48 -0.49 -0.45 -0.55 -0.57 -0.56 -0.48 -0.69 -0.62 -0.57 -0.48 -0.1 -0.72 -0.68 -0.71 -0.82 -0.42 -0.44 -0.45 -0.48 0.52 0.88 1.74 1.36 0.57 0.57
-2.98 -1.2 -1.05 -1.08 -1.71 -2.85 -0.72 -0.99 -0.72 -0.96 -1.22 -3.47 -0.73 -0.75 -0.2 -0.5 -0.32 0.09 -0.61 -0.31 1.48 0.96 2.07 0.06 1.85 0.69
-2.64 -3.38 -1.64 -0.76 -0.24 0.05 -0.09 -0.44 0.05 0.09 0.07 0.08 -2.1 0.44 -0.82 0.4 -0.79 -0.27 -0.49 -0.59 0.76 0.78 1.41 0.48 0.66 0.83
-0.64 -0.82 -1.07 -0.76 -0.85 -1.13 -0.32 -0.43 -0.23 -0.29 -0.33 -0.24 -0.51 0.2 -0.09 0.13 -0.29 0.49 -0.05 -0.34 0.23 0.64 1.36 0.64 0.65 0.64
-0.42 -0.73 -1.03 -0.39 -0.41 -0.76 -0.43 -0.12 -0.03 0.16 0.33 0.28 -0.04 0.31 0.12 0.16 -1.02 -0.27 -0.5 -1.51 0.78 0.7 1.09 0.55 0.29 -0.2
-0.77 -0.8 -0.98 -0.53 -0.09 0.1 -0.15 -0.27 -0.17 -0.16 -0.39 -0.59 -1.45 0.49 -0.02 0.17 -0.11 0.21 -0.31 -0.16 0.22 -0.15 1.71 0.43 0.36 0.08
-1.89 -1.58 -2.26 -1.42 -1.37 -1.58 -1.06 -1.39 -1.79 -0.78 -1.5 -1.0 -1.54 -0.16 -0.26 0.16 -0.18 0.36 0.41 -0.41 0.94 1.43 2.05 1.03 0.9 0.51
-1.82 -1.45 -1.37 -0.89 -0.71 -0.71 -0.54 -0.54 -0.36 -0.08 0.06 -0.04 -1.66 0.48 -0.08 0.13 -0.38 0.23 -0.35 -0.79 0.4 1.2 1.46 0.8 0.42 0.65
-1.39 -1.88 -1.87 -1.78 -1.44 -0.9 -0.55 -0.72 -0.81 -0.9 -0.92 -1.02 -1.35 -0.19 -0.61 -0.77 -1.05 -0.42 -0.61 -1.38 1.32 1.16 1.88 1.47 1.09 1.24
-2.88 - -2.62 -2.34 -1.28 -2.68 -0.82 -0.47 -0.77 0.0 -0.75 -1.09 -1.57 -0.42 -0.88 -0.7 -0.29 -0.31 -2.56 -0.97 1.15 1.3 2.39 1.0 1.53 0.71
-8.88 -9.0 - - -8.87 - -8.13 - - -8.62 - -8.47 - -0.23 -0.15 -0.06 -0.22 0.46 0.14 -0.27 1.49 1.35 2.63 1.07 1.41 1.47
-1.08 -0.51 -0.3 -0.16 0.04 0.19 0.23 0.05 -0.48 -0.45 -0.75 -0.8 -1.75 0.22 -0.14 0.36 -0.04 0.26 -0.07 0.15 0.38 -0.38 1.47 0.27 0.37 -0.11
-3.94 -3.42 -3.11 -1.83 -1.31 -0.6 0.53 0.64 0.57 0.17 0.33 -0.45 -4.19 -1.2 -1.31 -1.51 -1.59 -1.54 -1.85 -2.03 1.47 1.03 2.3 0.83 0.77 0.16
-0.53 -1.31 -1.56 -1.41 -0.66 -0.23 0.45 0.24 0.22 -0.03 -0.09 -0.25 -0.48 0.03 -0.19 -0.3 0.0 0.37 0.16 -0.2 0.33 0.15 1.43 0.49 0.06 0.01
-2.35 -1.54 -0.5 -0.1 -0.11 -0.55 -0.2 0.07 0.1 0.19 0.16 0.07 -2.24 -0.72 -0.15 -0.3 -0.55 0.2 -0.07 -0.97 0.67 0.83 1.25 0.95 0.49 0.0

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.