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Heatmap: Cluster_190 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
-1.27 -1.49 -2.46 -0.73 -0.51 -4.15 -0.41 -0.02 -0.33 0.01 0.95 0.41 -0.73 -0.48 -1.14 -1.28 -1.14 -1.13 -0.96 -0.58 -0.29 0.53 0.97 1.2 1.98 1.1
0.36 -0.42 -0.43 0.52 -0.05 -0.57 0.04 0.54 0.34 0.4 0.68 0.59 -0.04 -1.05 -2.07 -1.47 -1.43 -0.66 -1.05 -1.08 -1.87 0.35 0.26 0.33 0.87 1.1
0.38 -0.21 -0.1 0.44 0.02 -0.63 -0.15 0.16 -0.03 0.4 0.46 0.2 -0.11 -0.78 -0.72 -1.37 -1.23 -0.62 -0.74 -0.79 -2.76 0.15 0.6 0.23 1.33 0.86
0.14 -0.06 -1.2 0.06 -0.71 -2.97 -0.1 0.57 0.05 0.53 0.93 0.1 0.55 -0.58 -1.27 -1.34 -0.12 0.14 -0.75 -1.31 -1.85 1.77 -2.34 -1.59 1.08 0.62
0.71 -0.42 -0.31 0.79 0.21 -0.86 -0.16 0.57 0.03 0.23 0.67 0.29 -0.09 -0.55 -1.4 -0.82 -1.8 -0.79 -1.48 -1.23 -1.88 0.49 0.45 -0.23 0.85 1.06
0.57 -1.43 -0.85 1.0 0.15 -1.26 -0.36 0.48 0.23 0.8 0.89 0.31 -0.59 -1.85 -3.91 -2.61 -3.44 -1.52 -2.41 -3.0 -1.88 0.87 0.4 -0.0 1.7 1.2
0.33 -0.49 -1.11 -0.4 -0.94 -1.1 -0.32 0.03 0.26 0.54 0.83 0.65 -0.03 -0.78 -1.5 -1.39 -1.11 -0.3 -0.45 -0.74 -0.11 1.1 0.39 0.57 0.8 0.56
0.67 -0.32 -0.57 0.51 0.19 -0.6 -0.35 0.18 -0.35 -0.21 0.31 0.06 0.47 -0.33 -1.17 -0.62 -1.16 -0.87 -1.34 -1.3 -1.7 0.89 0.06 0.51 1.35 0.7
0.47 0.05 -0.45 0.27 0.07 -0.74 0.06 0.32 0.26 0.63 0.95 0.71 0.19 -0.63 -1.95 -0.68 -0.95 -1.02 -2.11 -1.31 -2.5 0.23 0.46 0.22 0.75 0.59
0.47 -0.42 -0.42 0.08 0.06 -0.33 0.13 0.0 0.11 0.09 0.28 0.42 0.8 -0.27 -0.26 -0.44 -1.05 -0.34 -0.62 -1.02 -0.87 0.43 0.32 -0.08 0.64 0.28
0.41 -0.44 -0.66 0.08 -0.14 -0.36 -0.16 0.35 0.41 0.35 0.55 0.33 0.52 -0.11 -0.67 -0.04 -0.81 -0.12 -0.71 -1.12 -0.94 0.46 0.31 0.0 0.31 0.23
0.35 -0.16 -0.23 -0.07 -1.07 -1.81 -0.49 0.05 -0.15 0.34 0.87 1.06 0.88 -0.01 -0.84 -0.47 -0.55 -0.47 -0.71 -1.0 -2.34 -1.1 0.08 0.41 1.09 0.7
0.83 -0.39 -0.06 0.87 0.34 -0.46 0.22 0.55 0.0 0.4 0.76 0.47 0.94 -1.56 -2.07 -1.78 -1.79 -2.2 -1.77 -1.29 -1.8 -0.21 0.56 -0.55 0.67 0.81
0.65 -0.33 -0.15 0.52 0.2 -0.42 0.28 0.51 -0.31 0.27 0.61 0.42 0.7 -1.03 -2.02 -1.35 -1.66 -1.67 -1.45 -1.06 -1.49 -0.49 0.81 0.48 0.74 0.84
0.19 -0.33 -0.38 0.44 -0.07 -0.59 -0.19 0.32 0.35 0.49 0.68 0.33 0.15 -0.58 -0.28 -0.74 -0.89 -0.52 -0.83 -0.71 -2.34 -0.01 -0.04 -0.13 1.18 0.76
0.49 -0.77 -0.9 0.39 0.06 -0.73 -0.08 0.4 0.02 0.25 0.66 0.41 0.46 -0.65 -1.5 -0.81 -1.87 -1.17 -1.59 -1.76 -0.98 0.82 0.39 0.28 1.27 0.75
0.14 -0.1 -0.36 -0.08 -0.03 -0.31 0.1 0.21 0.1 0.16 0.3 0.29 0.09 -0.58 -1.16 -0.56 -0.5 0.02 -0.74 -0.54 -0.48 0.55 0.58 0.42 0.6 0.23
0.43 -0.41 -0.68 0.19 0.18 -0.44 0.18 0.3 0.29 0.46 0.61 0.5 0.71 -0.34 -0.78 -0.18 -1.19 -0.82 -0.93 -1.38 -1.43 0.29 0.1 -0.37 0.85 0.39
0.57 -0.47 -1.07 0.26 0.15 -0.76 -0.29 0.02 0.15 0.34 0.8 0.61 0.35 -1.13 -1.53 -0.51 -1.82 -0.99 -1.11 -2.05 -0.88 0.76 0.41 0.58 1.16 0.47
-0.08 -1.77 -1.76 -0.25 -0.56 -0.51 -0.1 -0.96 0.15 0.57 1.01 0.94 0.34 -1.55 -1.18 -1.48 -1.34 -0.92 -0.77 -1.61 -1.15 1.22 0.77 0.66 1.29 0.6
-0.1 -0.7 -0.82 0.13 0.11 -0.33 0.16 0.22 0.38 0.27 0.44 0.33 0.05 0.03 -0.77 -0.2 -0.72 -0.66 -0.66 -1.1 -0.42 0.64 0.38 0.36 0.62 0.32
0.24 0.02 -0.5 -0.45 -0.4 -0.45 0.02 0.18 0.23 0.33 0.57 0.48 0.59 0.13 -0.5 -0.13 -1.02 -0.83 -0.88 -1.11 -1.45 0.96 0.08 0.27 0.34 0.39
-0.08 0.31 0.26 0.44 0.3 -0.08 0.07 0.05 -0.12 -0.29 -0.18 -0.1 -0.25 0.37 -1.35 0.55 -0.55 -0.68 -1.04 -0.84 -2.62 0.13 0.42 -0.18 1.21 0.41
0.49 -0.55 -0.54 0.19 0.38 0.15 -0.07 -0.18 -0.66 -0.54 0.16 0.8 0.88 0.11 -0.93 -0.24 -0.54 -0.54 -1.22 -0.85 -2.12 -0.23 0.03 -0.01 1.17 0.73
0.68 -0.16 -0.42 0.2 -0.16 -0.64 -0.55 0.02 -0.1 0.05 0.55 0.52 0.54 0.31 -0.25 -0.11 -0.46 -1.17 -0.67 -1.18 -1.0 -0.02 0.49 0.12 0.64 0.34
0.2 -0.61 -0.76 0.08 -0.04 -0.89 -0.02 0.11 0.23 0.33 0.78 0.62 0.6 -0.7 -1.24 -0.78 -1.26 -0.95 -1.57 -1.81 -0.55 0.93 0.59 0.36 1.0 0.27
-0.43 0.07 -0.06 0.6 0.54 -0.01 0.17 0.12 0.17 0.18 0.36 0.17 -0.37 -0.05 -0.59 -0.2 -0.77 -0.58 -0.68 -0.67 -2.85 0.02 0.1 -0.15 1.09 0.46
0.75 0.13 -0.32 0.75 0.57 -0.55 -0.19 0.38 -0.39 -0.19 0.52 -0.15 0.56 -2.03 -3.48 -2.3 -2.26 -1.98 -2.87 -1.79 -2.01 1.11 0.82 0.38 0.99 1.05
0.22 0.24 -0.17 0.74 0.32 -0.58 -0.29 -0.03 0.06 -0.07 0.33 0.25 -0.21 -0.61 -1.29 -0.91 -1.15 -0.34 -0.63 -1.45 -2.33 0.95 0.47 0.14 1.0 0.67
-0.19 -0.36 -1.99 -0.35 -0.05 -2.13 0.19 0.12 0.22 0.27 0.49 -0.47 0.04 0.22 -1.63 -0.32 -1.64 -0.88 -0.59 -4.05 -1.58 1.41 0.81 0.19 1.34 1.04
0.09 -0.55 -0.4 -0.15 -0.05 -0.34 0.1 0.02 -0.12 0.04 0.25 0.46 0.58 -0.25 -0.32 -0.08 -0.31 -0.14 -0.39 -0.33 -3.17 -0.19 0.65 0.24 0.88 0.39
0.13 0.0 -0.17 0.02 -0.07 -0.28 0.01 0.23 0.26 0.25 0.24 0.25 0.14 0.02 -0.18 -0.05 -0.62 -0.25 -0.38 -0.65 -3.11 0.16 0.3 0.24 0.57 0.38
0.39 -0.39 0.1 0.42 -0.43 -1.56 -0.62 0.25 0.17 0.11 0.47 0.74 0.43 0.3 -0.37 -0.28 -0.85 -0.74 -0.66 -0.95 -1.73 -0.18 0.07 0.02 0.94 0.76
0.3 -0.93 -0.72 0.2 0.16 -0.72 0.08 0.34 0.23 0.24 0.62 0.73 0.39 -0.32 -1.02 -0.66 -1.05 -1.03 -1.37 -1.67 -1.1 0.09 0.55 0.6 1.02 0.51
0.32 0.31 0.22 0.55 0.12 -0.52 -0.12 0.14 0.19 0.28 0.5 0.37 0.23 0.15 -0.88 -0.5 -0.99 -0.33 -0.99 -0.88 -2.56 -0.25 -0.23 -0.1 0.97 0.46
0.03 -1.08 -1.1 -0.54 -0.42 -1.19 -0.44 -0.18 -0.1 -0.27 0.25 0.65 0.7 -0.04 -0.32 0.24 -0.43 -0.56 -0.73 -1.33 -0.66 1.17 0.48 0.39 0.99 0.54
0.49 -0.02 0.14 0.73 0.26 -0.5 -0.17 0.33 -0.9 -0.16 0.35 0.34 1.21 0.13 -1.46 -0.12 -1.15 -1.02 -1.38 -1.27 -2.13 -0.51 0.19 -0.42 1.08 0.54
0.67 -0.35 -0.75 -0.41 -0.25 -0.42 -0.3 -0.17 0.06 0.3 0.46 0.59 0.49 0.32 -0.2 0.13 -0.96 -0.62 -0.71 -1.15 -2.44 0.59 0.26 -0.17 0.83 0.52
0.83 -0.2 -0.29 0.32 0.08 -0.71 0.01 0.4 0.09 0.26 0.81 0.75 0.76 0.03 -0.9 -0.16 -1.16 -1.17 -1.1 -1.25 -2.22 -0.24 -0.09 0.39 0.43 0.0
-0.03 -0.99 -0.63 -0.08 0.18 -0.14 0.09 0.27 0.34 0.28 0.42 0.52 0.35 -0.08 -0.75 0.02 -0.64 0.08 -0.65 -0.58 -0.9 0.23 0.42 0.14 0.43 0.04
0.24 -1.63 -1.37 -0.71 -1.22 -1.11 0.39 0.76 0.4 0.58 1.02 0.45 0.4 -0.64 -1.19 -0.57 -1.08 -0.1 -1.35 -1.13 -0.77 1.0 0.07 -0.61 1.25 0.47
0.21 -0.86 -0.77 0.33 -0.03 -0.63 -0.35 0.02 0.15 0.08 0.65 0.66 -0.3 -0.68 -2.2 -0.95 -1.69 -0.92 -1.72 -1.51 -0.48 0.37 0.67 1.02 1.32 0.95
-0.11 -1.22 -1.38 -0.12 0.5 -0.72 -0.24 -0.07 0.21 0.05 0.81 0.43 -0.11 -0.56 -2.6 -1.26 -2.16 -0.88 -1.37 -3.24 -0.6 0.78 0.88 0.82 1.51 0.96
1.49 -0.14 0.12 0.48 -0.73 -2.03 -0.8 0.51 -0.38 0.08 0.58 0.6 1.09 -0.42 -1.57 -1.2 -2.16 -2.1 -1.4 -1.2 -4.04 0.18 0.6 -0.68 0.62 1.22
-0.17 -0.7 -0.13 -0.07 -0.19 -0.39 0.03 0.26 0.55 0.46 0.39 0.28 -0.13 -0.07 -0.85 -0.38 -0.64 -0.2 -0.67 -0.43 -3.38 0.29 0.15 -0.1 1.03 0.95
0.36 -0.05 -0.13 0.46 0.25 0.0 0.01 0.27 0.08 0.1 0.26 0.09 0.15 0.08 -0.28 -0.15 -0.81 -0.28 -0.67 -0.59 -1.87 -0.45 0.13 0.09 0.45 0.64
0.42 -0.96 -0.6 0.58 0.69 0.17 0.13 -0.05 -0.88 -0.05 0.44 0.57 0.76 0.5 -1.28 -0.23 -1.48 -1.69 -2.04 -2.22 -3.97 -0.12 -0.27 -0.25 1.49 0.91
-0.23 -0.91 -0.37 0.37 0.53 -0.26 0.22 0.36 0.15 0.19 0.42 0.66 0.18 -0.69 -0.88 -0.23 -1.15 -0.69 -0.66 -1.15 -0.6 0.36 -0.32 -0.1 0.76 1.0
0.41 0.01 -0.29 0.6 0.66 0.52 -0.4 -0.36 -0.08 0.09 0.37 0.27 -0.72 - - -0.4 -2.21 - -2.41 - -0.59 1.22 1.11 -0.05 1.23 1.04
0.35 -0.86 -0.65 0.02 -0.08 -0.5 0.19 0.38 0.19 0.27 0.42 0.58 0.69 -0.2 -0.8 -0.13 -0.55 -0.6 -1.03 -0.96 -1.94 -0.01 -0.09 0.14 0.96 0.76
0.06 -0.48 -0.64 0.15 0.07 0.45 -0.05 -0.07 0.19 0.26 0.32 0.41 -0.22 -0.04 -0.8 0.04 -2.31 -0.92 -1.05 -1.51 -1.34 0.38 0.18 -0.21 1.33 1.04
0.52 -0.32 -0.33 -0.38 -0.25 -0.68 0.15 0.11 -0.19 0.2 0.34 0.48 0.53 -1.09 -0.91 -0.74 -0.55 0.26 -0.54 -0.29 -0.18 0.75 0.19 0.22 0.46 0.24

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.