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Heatmap: Cluster_182 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
1.03 1.01 0.65 0.83 -0.15 -0.06 0.28 0.47 0.02 -1.09 -0.7 -0.66 0.67 0.11 0.05 -0.11 -0.01 0.04 -0.19 -0.31 -3.9 -3.25 -3.01 -0.61 0.26 -0.11
0.83 0.59 0.46 0.77 0.34 -0.21 -0.01 0.29 -1.04 -0.67 -0.02 0.11 0.97 -0.66 -0.73 -0.55 -0.19 -0.19 -0.99 -1.01 -3.62 -1.48 0.16 -1.11 1.16 0.3
0.52 0.74 0.44 0.43 0.38 0.33 0.56 0.38 -0.68 -1.09 -1.28 -1.15 0.59 -0.21 -0.2 0.12 0.51 0.46 -0.11 -0.3 -5.19 -3.17 -2.31 -2.33 1.46 -0.43
1.08 0.48 0.72 1.02 0.77 0.47 0.36 0.63 -0.58 -0.62 -0.57 -0.33 1.02 -1.13 -1.01 -1.07 -0.85 -0.3 -0.58 -0.38 -6.9 -0.39 -2.19 -2.28 0.64 0.11
1.43 0.6 0.42 0.69 0.23 -0.28 0.14 0.52 -0.64 -0.79 -1.01 -1.26 1.45 -1.01 -1.52 -1.0 -1.47 -0.87 -0.96 -0.31 -1.87 -0.9 0.02 -0.61 0.38 1.07
1.06 0.48 0.22 0.23 -0.29 -0.68 0.01 0.51 -0.45 -0.34 -0.41 -0.45 1.15 0.01 -0.23 -0.2 -0.34 0.4 0.03 -0.64 -4.99 -1.96 -1.09 -1.21 1.1 0.34
0.9 1.48 1.15 0.79 0.43 0.16 -0.26 0.1 -0.29 -1.42 -1.05 -0.77 1.0 -0.5 -0.81 -0.11 -0.55 -0.62 -0.49 -0.51 -8.38 -1.59 -6.25 -4.42 1.48 -0.61
1.29 0.79 1.29 1.26 0.57 -0.22 0.27 0.72 -1.79 -3.53 -2.91 -1.89 1.56 -1.97 -2.09 -1.55 -1.19 -0.69 -0.81 -0.55 -7.33 -4.32 -4.38 -5.88 1.74 0.54
1.58 1.82 1.36 0.52 -0.47 -1.57 -0.37 0.38 -2.46 -1.06 -1.8 -1.87 1.6 -2.13 -2.64 -1.68 -1.99 -0.45 -0.77 -0.44 - -5.77 -6.9 -4.53 2.06 -0.2
0.73 0.68 0.43 0.34 0.17 0.38 0.36 0.27 -0.62 -0.65 -0.52 -0.42 0.71 -0.0 -0.17 0.02 0.35 0.0 0.11 -0.24 -2.02 -2.01 -1.23 -1.18 0.53 -0.12
1.07 1.05 0.43 -0.03 -0.34 -0.41 -0.54 -0.56 -1.9 -1.46 -1.1 -0.6 1.09 -0.07 -0.03 -0.15 -0.29 0.25 0.4 -0.27 -3.13 -0.26 -0.47 -1.41 1.39 0.08
1.53 1.28 0.92 0.61 -0.3 -0.96 -0.68 0.03 -2.09 -1.66 -1.21 -0.51 1.64 -1.37 -0.56 -1.12 -1.18 -0.06 -0.77 -0.58 -1.87 -0.49 -1.35 -1.63 1.44 -0.12
1.09 0.5 0.36 0.67 0.53 0.34 0.14 0.3 -0.38 -0.21 0.03 0.38 1.19 -1.38 -1.1 -1.25 -1.1 -0.61 -0.96 -0.88 -5.63 -2.07 -0.96 -0.71 1.27 0.08
1.24 0.63 0.32 0.58 0.64 0.63 0.46 0.43 -1.04 -1.2 -1.07 -1.01 0.79 -0.89 -1.11 -1.02 -0.81 -0.23 -0.34 -0.39 -3.98 0.06 -1.36 -1.03 1.09 0.4
0.95 0.62 0.73 0.42 0.06 -0.41 -0.42 0.13 -0.43 -0.34 -0.18 -0.14 0.77 -0.45 -0.36 -0.22 0.17 -1.09 -0.76 -0.41 -2.83 -0.83 -1.35 -0.57 1.33 0.35
1.16 0.72 0.41 0.47 0.18 -0.3 -0.0 0.31 -0.62 -0.46 -0.27 -0.16 0.9 -0.39 -0.33 -0.44 -0.84 -0.03 -0.38 -0.46 -3.89 -1.11 -0.33 -0.96 1.02 0.07
1.27 0.83 0.14 0.32 0.38 0.18 0.19 0.21 -1.02 -0.94 -0.82 -0.93 0.8 0.29 -0.63 -0.02 -0.26 -0.48 -0.41 -0.48 -4.52 -0.69 -0.55 -0.99 1.0 0.19
1.32 0.87 0.61 0.54 -0.07 -0.58 -0.45 -0.18 -0.75 -0.65 -0.3 0.1 1.28 -0.78 -0.9 -0.12 -0.96 -0.72 -0.88 -0.79 -2.8 -0.07 -0.31 -0.75 0.89 0.34
0.73 0.34 0.45 0.43 0.48 0.2 0.26 -0.01 -0.48 -0.76 -0.78 -0.51 0.59 -0.19 -0.08 -0.09 -0.27 0.12 0.24 -0.12 -3.29 -1.05 -0.84 -0.27 0.22 0.68
0.71 0.77 0.94 0.7 0.45 0.05 -0.26 -0.04 -1.11 -0.84 -0.77 -0.54 0.72 -0.32 -0.8 -0.52 0.09 -0.58 -0.65 -0.13 -5.14 0.07 -1.83 -1.34 1.27 0.53
1.11 0.85 0.53 0.69 0.34 -0.17 0.13 0.41 -0.01 -0.23 -0.09 -0.05 1.09 -0.76 -0.83 -0.57 -0.65 -0.54 -0.4 -0.83 -2.54 -2.01 -0.91 -1.02 0.75 -0.11
0.75 0.46 0.53 0.69 0.44 0.56 0.25 0.47 0.23 -0.28 -0.18 -0.06 0.59 -0.68 -0.63 -0.66 -0.95 -0.65 -0.53 -0.38 -2.04 -0.19 -1.2 -0.66 0.27 0.29
0.6 0.25 0.34 0.51 0.43 0.18 0.05 0.24 -0.3 -0.22 -0.18 -0.19 0.68 -0.04 -0.18 -0.09 -0.31 -0.14 0.13 -0.11 -3.58 -0.68 -0.78 -0.8 0.32 0.3
0.77 0.59 0.98 1.08 0.68 0.36 -0.4 0.53 -0.05 -0.42 0.01 0.17 1.17 -1.38 -1.58 -1.7 -1.26 -0.9 -0.89 0.22 -4.9 -3.01 -2.67 -0.69 0.27 0.77
1.19 0.92 0.8 0.77 0.41 0.23 0.1 0.2 -0.87 -0.99 -0.45 -0.26 1.17 -1.13 -0.48 -1.31 -0.87 -0.86 -0.36 -0.62 -2.86 -2.07 -0.4 -1.61 0.95 0.38
0.8 1.31 1.13 0.96 0.66 0.57 0.36 0.3 -0.29 -0.69 -0.46 -0.45 0.54 -1.19 -1.56 -1.1 -0.32 -0.42 -0.47 -0.08 -5.78 -2.36 -2.55 -1.89 0.91 -0.51
1.22 0.57 0.67 0.84 0.51 0.1 0.22 0.29 -1.14 -0.87 -0.83 -0.45 1.37 -0.32 -0.61 -0.43 -0.72 -0.47 -0.71 -0.38 -2.43 -0.07 -1.74 -1.27 0.19 0.19
1.15 0.55 0.62 0.75 0.36 0.13 0.41 0.48 -0.25 -0.24 -0.19 -0.19 1.2 -0.35 -1.93 -1.07 -0.67 -0.48 -1.39 -0.7 -3.47 -1.35 -1.73 -2.78 1.14 0.33
1.3 0.52 0.37 0.31 -0.28 -0.83 -0.16 0.37 -0.76 -0.25 0.17 0.21 1.48 -0.69 -1.35 -0.55 -1.45 -0.36 -0.94 -1.23 -2.82 -1.77 -0.87 -1.29 1.58 0.4
0.37 0.54 0.41 0.29 0.3 0.09 0.22 0.49 0.12 -0.17 -0.15 -0.36 0.59 -0.43 -0.3 -0.27 -0.38 0.3 -0.29 -0.39 -4.47 -2.83 -1.03 -0.54 1.3 -0.2
0.95 0.96 0.94 1.0 0.5 -0.2 0.05 0.32 -0.67 -0.73 -0.49 -0.21 0.88 -2.1 -1.54 -1.72 -0.72 -0.2 -0.98 -0.01 -2.43 0.14 -1.76 -1.15 0.78 0.47
1.85 1.43 0.85 0.4 -1.11 -1.51 -0.28 0.93 -2.09 -2.38 -2.19 -2.2 1.96 -2.72 -2.81 -2.38 -2.26 -1.79 -1.79 -0.73 -4.41 -0.85 -3.36 -2.73 1.85 0.97
0.7 0.67 0.76 0.73 0.67 0.69 0.61 0.61 -0.07 -0.99 -1.19 -1.4 0.64 -0.25 0.34 0.23 -0.05 -0.8 -0.59 -0.51 -8.53 -4.67 -2.01 -3.64 1.09 -0.63
0.75 0.8 0.89 0.99 0.72 0.22 0.46 0.75 -0.53 -1.98 -1.95 -1.96 0.83 -0.55 -0.34 -0.31 -0.07 -0.47 -0.41 -0.4 -5.99 -2.51 -3.03 -3.23 1.37 0.24
0.83 0.95 0.87 0.59 0.16 -0.13 -0.1 0.03 -0.34 -0.28 0.23 0.42 0.89 -0.46 -0.83 -0.19 -0.65 -0.44 -0.46 -0.46 -5.04 -2.45 -1.06 -0.81 0.59 0.3
0.81 0.93 0.18 0.46 -0.16 -0.19 -0.12 -0.12 -0.41 -0.45 -0.31 -0.05 0.63 -0.25 0.03 -0.56 -0.54 -0.37 -0.32 -0.23 -2.24 -0.72 -0.67 -0.45 1.3 0.18
1.45 1.05 0.82 0.75 -0.05 -0.32 0.11 0.18 -1.82 -1.58 -1.0 -0.34 1.56 -1.12 -1.46 0.49 -1.6 -0.82 -0.98 -0.78 -3.84 -0.54 -1.62 -1.21 0.66 0.69
1.02 0.7 0.82 1.09 0.6 -0.1 -0.24 0.42 -0.29 -0.5 -0.08 -0.02 0.86 -0.57 -0.68 -0.88 -0.8 -1.0 -0.48 -0.11 -3.78 -1.12 -1.29 -1.44 0.54 0.28
0.66 0.69 0.74 0.92 0.87 0.19 0.19 0.44 -0.38 -0.75 -0.63 -0.53 0.69 -1.13 -0.83 -0.93 -0.6 -0.07 -0.79 -0.35 -2.91 -0.26 -1.73 -1.46 1.05 0.33
0.85 0.83 0.89 0.62 0.08 -0.8 -0.11 -0.0 -0.69 -0.5 -0.09 -0.12 0.62 -1.01 -0.68 -0.96 -0.33 0.28 -0.17 0.34 -3.45 -2.13 -0.87 -0.82 1.03 0.58
1.41 0.52 0.44 0.54 -0.17 -0.57 0.01 0.44 -1.4 -1.18 -0.89 -0.87 1.46 -0.06 -0.04 -0.2 -0.58 -0.71 -0.7 -0.89 -3.81 -0.79 -1.18 -2.12 1.22 0.7
1.1 0.6 0.43 0.25 0.01 0.06 0.09 0.29 -0.34 -0.38 -0.28 -0.21 1.21 -0.8 -0.48 -0.63 -0.15 -0.37 -0.32 -0.12 -1.74 -0.04 -0.62 -1.11 0.39 -0.23
1.39 1.13 0.42 0.37 -0.28 -0.62 0.02 0.37 -0.02 -0.41 -0.36 0.08 1.4 -2.35 -1.6 -1.77 -0.97 0.01 -0.51 -0.22 -7.36 -3.08 -2.64 -1.67 1.61 0.01
1.1 0.68 0.55 0.51 -0.05 -0.04 -0.35 -0.54 -0.82 -0.77 -0.01 0.29 0.86 -0.5 -0.74 -0.38 0.09 -0.27 -0.29 -1.16 -2.2 -0.31 -0.31 -0.43 0.82 0.24
0.79 0.55 0.63 0.62 0.17 0.17 0.32 0.49 -0.26 -0.31 -0.41 -0.21 0.74 -0.31 -0.67 -0.04 -0.09 -0.21 -0.36 -0.29 -3.59 -1.16 -1.34 -0.84 0.54 0.17
0.9 1.25 1.21 1.02 0.33 -0.91 -0.59 0.13 -0.17 -1.33 -0.95 -0.6 0.69 -0.8 -0.55 -0.62 -0.45 -0.29 -0.65 0.06 -4.09 -1.33 -2.04 -2.12 1.13 0.62
0.88 0.87 0.44 0.61 0.44 0.32 0.25 0.08 -0.32 -0.34 -0.32 -0.36 0.46 -0.12 -0.13 -0.44 -0.16 0.27 0.21 0.04 -6.02 -2.81 -1.94 -1.05 0.26 0.13
1.52 1.03 0.66 0.61 -0.09 -0.86 -0.75 -0.53 -1.95 -1.79 -1.61 -1.1 1.35 -0.48 -0.44 -0.12 -0.54 0.42 -0.09 -0.69 -3.1 -0.36 -1.79 -1.02 1.08 0.65
0.9 0.01 0.25 0.63 0.41 0.37 0.29 0.79 0.45 0.15 0.03 -0.19 0.92 -1.03 -0.95 -0.45 -1.14 -0.54 -0.62 -0.82 -3.01 -0.4 -0.92 -0.89 0.45 0.18

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.