Heatmap: Cluster_21 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Ovule	Ovule, mature	Ovule, pollinated	Strobilus, female	Ovulate strobilus	Microstrobilus	Kernel	Leaf	Leaf, female	Leaf, male	Leaf, salicylic acid	Leaf, seedling	Leaf, truncation control	Leaf, truncation treatment	Leaf, water	Yellow-green stripe leaves	Green leaves	Stem	Cambium	Root
Gb_01024	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_01501	0.62	-1.57	-2.01	-0.34	-1.69	3.88	0.21	-3.53	-	-1.77	-	-	-4.88	-	-	-	-	-2.84	-5.25	-1.56
Gb_01889	0.09	-2.51	-1.04	-1.44	-2.05	3.6	-1.79	-3.97	-5.3	-5.09	-	-7.22	-6.61	-6.25	-	-4.05	-3.01	-1.64	-3.39	2.16
Gb_01910	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_02049	-	-5.6	-6.76	-5.06	-5.02	4.19	0.65	-9.47	-	-	-	-	-	-	-5.26	-	-	-6.93	-	-
Gb_02059	-1.98	-	-	0.67	1.15	1.81	-1.69	0.75	1.33	1.13	0.6	-0.81	-3.21	-3.12	-0.02	-	-1.54	0.18	-0.9	-1.14
Gb_02235	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_02751	-0.52	-	0.15	-	-	4.18	-	-4.58	-	-	-	-	-	-	-	-	-	-	-	-
Gb_03822	-	-	-	0.0	-	1.78	-2.31	0.33	0.7	-0.72	1.37	-1.2	-2.09	-0.58	1.09	-	-0.8	-0.3	2.15	-
Gb_04153	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_04436	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_05532	-	-	-	-	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-
Gb_06744	-0.84	-	-	-	-	3.73	0.03	-2.82	-1.66	-0.35	-	1.78	-	-	-	-	-	-1.06	-	-
Gb_06745	-0.6	-	0.37	-	-	3.66	-	-2.37	0.28	1.29	-	0.46	-	-	-	-	-	-	-2.83	-
Gb_06746	-0.13	-	-0.85	-	-0.69	3.89	-	0.44	-0.79	-0.63	-	-1.8	-	-2.35	-	-	-	-	-	-
Gb_06816	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_07328	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_08582	-4.97	-5.04	-4.52	-5.23	-4.61	3.54	-4.05	0.37	-0.91	-1.54	0.04	-0.74	0.23	-0.46	-0.1	-2.91	-4.04	-3.36	-2.1	-0.04
Gb_09351	-2.4	-	-	-2.32	-	4.09	-	-5.06	-3.3	-3.86	-	-4.33	-	-	-	-	-	-	-	1.19
Gb_10042	-	-	-	-	-1.19	3.71	-	0.48	-0.92	-1.09	-	0.63	-	-1.71	-	-	-0.78	0.61	-2.92	-
Gb_10243	-3.0	-3.06	-2.12	-4.3	-3.81	3.91	2.1	-7.87	-	-11.49	-	-13.63	-11.95	-11.55	-	-10.98	-	-6.09	-5.9	-4.79
Gb_11287	0.48	-1.37	-0.81	-0.12	-2.26	3.41	0.7	-2.03	-2.98	-3.15	-1.7	-3.57	-3.87	-3.47	-1.99	-1.45	-2.78	0.12	0.02	-1.55
Gb_11424	-5.62	-	-	3.18	1.96	-	-1.33	-0.67	0.15	-	0.73	-	-0.27	-0.61	-4.46	-	-0.6	-6.42	-1.32	-0.63
Gb_11461	-0.55	-2.65	-3.13	-0.83	-2.14	3.14	-0.1	-0.46	-1.61	-1.57	-1.36	1.59	-3.14	-3.9	-1.92	0.74	0.32	-1.61	-	-4.91
Gb_11796	-0.67	-3.86	-2.71	-4.24	-3.37	3.11	1.58	-6.39	-8.51	-8.97	-10.46	-7.18	-11.3	-10.4	-10.61	-9.57	-6.98	-2.48	-2.61	2.81
Gb_12158	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_12166	-0.14	0.01	-0.16	0.55	-1.11	3.38	-1.93	-0.73	-0.41	-0.12	-2.2	-4.1	-3.55	-2.55	-1.36	-	-	-0.33	-	-0.72
Gb_13273	-1.71	-18.16	-3.58	2.21	-0.67	-18.37	-1.36	0.56	-0.97	-1.88	2.36	-3.63	-0.09	-0.6	0.97	-2.72	-18.21	-28.19	-	1.48
Gb_14031	-2.0	-	-	2.77	-1.52	3.12	-6.85	0.28	-4.79	-6.43	-	-6.36	-7.01	-5.41	-4.06	-2.27	-2.27	1.03	-7.49	-3.7
Gb_14426	-	-	-	-0.48	-	4.26	-	-	-	-	-	-	-	-	-	-	-	-	-	-2.44
Gb_15014	-2.27	-	-2.3	-	-0.11	4.03	-2.95	-1.16	-5.58	-	-	-2.47	-	-4.55	-4.41	-	-	-2.21	-	0.27
Gb_15692	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_15697	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_15727	-	-	-	-5.48	-	4.09	1.54	-9.39	-	-	-	-	-	-	-	-	-	-7.71	-24.99	-5.65
Gb_15733	-	-	-	-4.94	-10.18	4.24	0.13	-9.38	-	-	-	-	-	-31.08	-	-	-	-7.21	-	-5.6
Gb_15791	-	-	-	-	-	3.32	3.32	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_15960	-5.92	-6.89	-7.02	-4.18	-5.47	3.98	1.92	-5.92	-6.05	-6.38	-3.82	-6.26	-6.49	-6.55	-3.61	-6.65	-4.92	-6.34	-6.13	-4.26
Gb_16402	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_17941	-1.84	-	-	-1.76	-	3.9	0.47	-3.38	-2.25	-0.81	-	0.75	-	-	-	-2.77	-1.38	-	-	-
Gb_19468	-	-	-7.04	-3.96	-9.59	4.31	-8.01	-9.63	-	-	-	-	-	-	-	-	-	-7.59	-	-5.8
Gb_19469	-	-	-	-5.59	-	4.32	-	-9.15	-	-	-	-	-	-	-	-	-	-6.74	-	-5.85
Gb_19609	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_20083	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_20158	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_22264	-4.44	-1.12	-3.97	-2.93	-3.26	4.13	-0.84	-2.68	-5.4	-4.75	-3.7	-2.9	-6.65	-5.09	-3.55	-2.6	-3.7	-2.08	-6.89	-5.11
Gb_22375	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_23058	-2.32	-	-2.4	-1.22	-	2.54	-1.03	-4.09	-4.47	-5.32	-	-	-4.85	-6.01	-	-	-	-1.31	-2.91	3.6
Gb_25663	-1.12	-	0.48	-	-0.4	2.07	-	0.79	-2.13	0.12	-	0.53	0.18	1.58	-1.72	-0.83	-0.71	1.53	-	-2.41
Gb_26346	1.22	-1.7	2.05	0.47	1.28	3.11	-8.19	-5.14	-4.79	-3.24	-8.58	-5.92	-9.88	-5.87	-	-	-4.22	-3.64	-4.54	-1.47
Gb_27701	-	-	-	-2.63	-	4.29	-1.76	-7.44	-	-	-	-	-	-	-	-	-	-	-	-
Gb_28293	-1.15	-1.06	-0.84	-1.02	0.28	2.13	-5.48	-0.18	-1.7	-1.04	-1.42	-1.52	0.05	-0.48	-1.97	-1.45	-0.74	0.74	-0.03	2.13
Gb_28294	-2.29	-2.1	-2.83	-1.82	-0.36	2.78	-4.58	-1.79	-5.95	-4.06	-5.94	-3.55	-5.15	-5.02	-	-4.34	-3.32	0.15	-0.98	3.19
Gb_28495	0.98	-	-	0.73	0.07	-	-1.86	1.32	0.13	-0.84	0.18	-	1.7	-2.3	1.34	-	-	-	0.51	1.25
Gb_29098	-	-	-	-	-	4.03	1.63	-	-	-	-	-	-	-	-	-1.55	-	-1.89	-	-
Gb_29623	0.55	-1.86	-1.15	-0.98	-0.96	2.64	-0.46	-0.25	-1.64	-1.54	-1.85	-1.31	-2.74	-2.82	-2.17	-1.31	-1.0	0.68	-1.05	2.05
Gb_29632	1.67	0.94	1.05	1.01	-1.51	3.29	-1.41	-3.86	-	-	-	-5.87	-6.9	-	-	-5.22	-	-3.36	-4.98	-4.76
Gb_29905	-4.66	-	-4.68	-	-	3.78	-1.18	-3.94	-	-	-	-	-	-	-	-	-	1.2	1.75	-4.97
Gb_30007	-3.31	-	-	-	-	3.86	0.18	-1.26	-1.04	-0.19	-	-3.15	-1.18	-1.96	-	-	-1.87	-	-0.04	-1.19
Gb_30296	-2.51	-1.05	-1.33	-1.95	-2.67	3.82	-5.38	-1.15	0.29	-0.71	-0.96	-2.55	-1.94	-1.76	-1.39	-2.32	-4.42	-4.26	-2.68	-4.4
Gb_31286	-	-	-	-3.61	-	4.16	0.96	-8.0	-	-	-	-	-	-	-	-	-	-4.49	-	-
Gb_31906	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_32207	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_32377	-	-	-	-	-	4.13	-0.86	-1.71	-1.86	-1.07	-	-2.06	-	-	-	-	-	-	-0.67	-
Gb_33677	-1.6	-2.03	-4.06	-4.08	-3.5	4.24	-7.0	-6.26	-11.33	-10.6	-	-7.39	-	-11.29	-	-	-	-5.75	-11.43	-2.03
Gb_33734	0.8	-0.69	0.15	-0.81	-0.42	3.0	0.77	-2.76	-2.63	-2.88	-6.28	-4.83	-5.19	-5.64	-6.44	-3.37	-2.62	-1.93	0.17	1.74
Gb_35581	-10.51	-	-9.37	-5.47	-9.43	4.32	-10.14	-9.36	-	-	-	-	-	-	-	-	-	-7.37	-	-5.81
Gb_36053	-3.84	-5.43	-4.6	-0.3	-3.92	3.71	2.11	-3.82	-3.28	-3.02	-2.26	-3.78	-4.75	-5.45	-3.03	-1.63	-2.71	-2.76	-2.92	-4.76
Gb_36276	-	-7.57	-7.74	-4.92	-9.32	4.32	-	-9.14	-	-	-	-	-	-	-	-	-	-6.77	-	-5.01
Gb_36778	-4.03	-4.43	-4.1	-2.23	-3.5	3.16	-0.84	-2.45	-2.73	-2.6	-0.48	-2.07	-2.46	-2.86	-0.33	-2.41	-2.96	-3.12	1.78	1.86
Gb_37644	-2.32	-	-2.33	-	-2.17	3.67	-	-5.39	-	-	-	-	-	-	-	-	-	0.36	0.53	1.98
Gb_37645	0.04	-	-0.78	-	-	3.8	1.74	-3.22	-4.47	-	-	-3.27	-3.23	-	-1.48	-	-	-	-2.76	-1.98
Gb_38206	-1.63	-2.33	-0.83	-	-1.81	3.89	-0.25	-3.07	-3.15	-3.3	-	-5.44	-	-	-	-	-2.99	-0.6	-0.29	-0.01
Gb_38378	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_38754	-	-	-	-6.2	-	4.17	0.8	-9.65	-5.18	-8.13	-4.33	-9.78	-8.6	-	-3.71	-	-7.79	-6.21	-6.02	-4.92
Gb_39317	-8.83	-	-	-	-	4.31	-2.82	-9.17	-	-	-	-	-	-	-	-	-	-7.35	-8.48	-4.79
Gb_39318	-	-	-	-6.22	-	4.31	-3.6	-9.3	-	-	-	-	-	-	-	-	-	-7.43	-11.13	-5.4
Gb_39325	-8.37	-7.81	-	-4.27	-	3.91	2.23	-9.25	-9.34	-9.78	-	-	-	-	-	-	-	-7.13	-5.17	-2.52
Gb_39462	-	-	-	-	-	2.81	3.21	-3.41	-	-	-	-	-1.33	-	-	-	-	-	0.64	0.75
Gb_39600	-3.18	-4.6	-5.08	-1.13	-1.07	3.75	0.48	-2.07	-4.81	-4.83	-2.68	-2.89	-4.2	-4.32	-2.4	-1.89	-1.6	0.27	0.03	-1.52
Gb_39867	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_40079	-	-	-	-	-	4.32	-	-7.66	-	-	-	-	-	-	-	-	-	-	-	-
Gb_41197	-	-	-	-	-	4.07	1.52	-4.66	-	-	-	-3.18	-2.57	-	-	-	-	-	-	-

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.