Heatmap: Cluster_76 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Ovule	Ovule, mature	Ovule, pollinated	Strobilus, female	Ovulate strobilus	Microstrobilus	Kernel	Leaf	Leaf, female	Leaf, male	Leaf, salicylic acid	Leaf, seedling	Leaf, truncation control	Leaf, truncation treatment	Leaf, water	Yellow-green stripe leaves	Green leaves	Stem	Cambium	Root
Gb_01484	-	-	-	3.2	-	-	1.64	1.29	-	-	-	-	-	-	-	-	-	2.39	-	-
Gb_01855	1.72	-0.06	1.04	0.73	0.74	-2.24	-0.03	-2.35	-2.54	-2.7	-6.08	-4.46	-4.73	-3.33	-	-2.15	-0.25	-0.76	-5.98	2.76
Gb_03099	-	-	-	-	-0.87	-0.12	0.62	0.75	-0.05	-0.58	-0.42	1.42	-1.96	-2.06	-0.3	0.39	2.29	-	-1.99	1.32
Gb_03489	0.97	1.24	-0.12	1.4	1.59	0.7	-4.8	-0.97	-3.16	-1.75	-4.14	-3.4	-3.4	-0.44	-4.33	-0.07	0.18	1.15	0.07	-2.72
Gb_04257	2.51	-	-	2.83	-0.21	-2.13	1.1	0.5	-1.58	-2.14	-2.43	-	-2.61	-	-	-2.04	-2.22	-0.15	-3.81	-2.42
Gb_04303	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_05014	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_06182	1.52	1.93	2.09	0.95	-1.66	-1.14	-4.02	-0.48	-	-	-	-	-	-	-	-	-	2.48	-	-
Gb_06954	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_08147	2.49	1.28	2.47	2.13	0.77	-	-3.23	-3.45	-	-	-	-	-	-	-	-	-	-2.56	-	-
Gb_08348	0.17	-0.13	0.99	0.13	-0.76	-0.63	-0.93	-0.89	-2.05	-2.76	-1.89	-1.37	-4.04	-4.75	-2.03	-2.48	-2.54	-1.36	1.06	3.06
Gb_08669	1.98	-	1.23	1.31	-1.22	0.3	-0.49	0.86	-0.61	-2.89	-	-0.65	-3.08	-2.69	-1.16	-	-0.15	0.4	1.17	-1.25
Gb_09971	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_10357	-0.17	-	-	-	-	-	0.18	-	-0.9	-0.06	0.77	-	1.21	-	0.57	2.5	-	0.75	1.87	-
Gb_10830	-3.49	-3.7	-3.18	-	-4.86	-	-2.39	-4.09	-	-	-	-	-	-	-	-	-	-	-2.37	4.27
Gb_11826	2.1	1.19	2.5	1.25	-0.29	-2.9	-0.63	-0.42	-3.74	-6.17	-4.4	-1.38	-6.13	-5.54	-	-4.85	-3.14	-0.82	-5.91	0.79
Gb_12370	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_12862	0.36	-	1.36	1.83	-1.3	-	-2.07	-1.41	-	-	-	-2.63	-	-	-	-	-	-0.57	2.83	1.86
Gb_13482	1.44	-0.72	-0.27	1.33	-0.2	-0.12	-6.3	-0.1	-2.8	-2.16	0.77	-0.27	-0.94	-1.43	0.65	0.86	1.1	-0.18	-3.24	-1.74
Gb_13752	-0.34	-	-	-	-14.22	-	1.17	-0.16	-1.13	-4.85	0.46	1.49	-	-0.71	1.43	-	1.7	1.11	1.41	-6.74
Gb_14806	1.08	-	0.12	-	-0.8	-0.76	-1.81	-0.01	1.65	-0.21	2.16	-	-	-	0.42	0.74	0.36	-	-1.57	0.33
Gb_15187	3.15	-1.47	2.18	2.28	-0.9	-5.75	-4.71	-1.36	-7.65	-4.15	-	-	-	-7.46	-5.04	-3.45	-3.2	-4.13	-5.99	-6.25
Gb_15219	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_15757	1.11	-	1.06	0.05	-4.11	-	-0.02	1.13	-1.16	-	2.82	-0.53	1.46	-3.84	-	-	-	-	-1.12	-
Gb_15774	1.0	0.33	1.38	-2.07	-2.36	-0.3	-1.17	0.44	-5.29	-5.21	-	-6.35	-	-	-3.48	2.76	1.87	-1.09	-	-4.69
Gb_16061	1.31	-	0.87	2.73	1.81	-2.34	-0.37	-0.91	-	-	-	-	-	-	-	-1.84	-	1.9	-	-
Gb_17754	1.46	-1.93	-0.25	1.61	-0.11	-3.86	-1.62	-0.19	0.5	0.08	0.21	-1.07	-0.58	-0.81	-0.42	1.11	1.3	-2.72	-8.68	-5.46
Gb_18668	-2.44	1.49	-	1.22	0.87	1.82	-1.8	1.11	-0.77	0.7	-0.21	0.37	-2.82	-	-0.35	-	-	-0.33	-0.71	-2.74
Gb_18755	2.2	1.59	2.23	1.97	0.03	-0.91	-3.69	-1.02	-	-	-	-5.54	-	-	-4.38	-0.5	-0.42	-2.7	-	-
Gb_18794	1.31	0.65	1.23	-0.61	-1.62	-0.77	-1.08	-1.93	-1.34	-4.13	-	-1.17	-2.9	-4.78	-3.4	-0.03	0.0	-0.08	-1.75	2.79
Gb_19597	1.31	-1.31	-0.3	0.63	0.18	-1.47	-2.63	-0.15	-0.29	0.24	-2.87	0.63	-2.75	-2.26	-3.98	-1.12	0.51	-0.47	-5.0	2.44
Gb_19980	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_20404	-0.44	-1.29	-	-	-2.36	3.29	-	1.43	-0.78	-0.22	-1.47	-0.03	-1.72	-1.85	-0.6	-2.16	-1.21	-0.63	-2.39	-0.59
Gb_21015	0.79	0.47	0.58	1.28	0.26	-4.34	0.69	0.25	-0.78	-1.47	-1.54	-2.05	1.02	0.62	-0.6	0.61	0.51	-2.34	-	-6.55
Gb_21136	0.36	-0.17	0.48	-0.3	1.13	0.8	-0.11	-0.46	0.18	-	-0.33	-1.93	-2.15	-1.75	-	-1.91	-	0.22	1.53	1.59
Gb_22376	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_22423	-1.41	-1.96	-	3.25	-	-0.56	-3.98	-0.28	-	-	-	-2.61	-	-	-	2.77	-1.08	-0.29	-	-
Gb_22516	-5.1	-	-5.16	-	-	-4.82	-5.78	0.02	3.04	-2.52	2.31	-2.92	-2.21	-1.92	0.38	-4.87	-3.84	-	0.89	0.72
Gb_23428	0.86	-1.34	0.11	-	-2.5	-	-3.35	1.16	0.06	-1.31	-0.99	-1.09	-1.21	-0.62	1.57	1.49	1.38	-	0.22	0.23
Gb_23445	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_23667	-	-	-	-	-	-	-	1.15	-	-	4.15	-	-	-	-	-	-	-	-	-
Gb_24352	1.51	2.09	1.31	1.18	-0.45	-1.58	-1.48	0.02	-2.75	-	-4.47	-3.58	-5.77	-3.12	-3.62	-2.14	-0.04	-0.6	-	1.75
Gb_24613	2.77	1.14	2.42	2.03	-0.06	-	-2.35	-3.15	-	-	-	-	-	-	-	-	-	-1.82	-	-
Gb_25550	-0.02	-0.72	-0.21	0.44	0.16	-0.53	1.0	-0.31	-1.57	-1.84	-1.94	-1.63	-2.54	-2.32	-1.76	-1.13	-0.98	0.16	1.24	2.39
Gb_26303	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_26604	-0.02	-	-	0.34	-	-	1.59	-1.24	-	-2.18	-	-	-	-	-	-	-	1.96	-1.91	3.31
Gb_27170	2.98	1.62	1.85	1.42	0.27	-	-0.66	-2.06	-	-	-	-	-7.34	-	-	-	-	-0.66	-7.62	-
Gb_27171	2.43	2.31	2.36	1.12	0.15	-	-0.79	-3.4	-	-	-	-	-	-	-	-	-	-0.81	-	-
Gb_28593	1.58	0.5	2.18	1.04	-0.04	0.8	-2.17	0.14	-1.6	-1.1	-1.67	-1.57	-1.56	-1.42	-3.25	-0.5	-0.91	-1.06	-0.32	-2.59
Gb_29101	2.19	1.38	2.13	2.53	0.77	-3.54	-2.4	-1.12	-4.18	-4.69	-	-4.24	-	-	-	-3.58	-	-	-5.51	-
Gb_29452	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_29514	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_30080	0.78	-	-	-	-	-	-	-	-	-	-	-	-	-	-	3.83	-	-	2.02	-
Gb_30570	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Gb_30899	-	-	-	-	-	1.27	-	0.85	1.05	2.33	2.05	-	-	-	0.99	1.36	-	-	-	-
Gb_31239	-0.97	-	-2.61	-2.54	-3.24	3.83	-	0.36	-4.88	-3.4	-0.82	0.71	-3.5	-5.74	-4.43	-	-0.73	-3.42	-3.23	-1.87
Gb_31493	1.07	-0.19	0.98	-1.19	-0.62	0.14	0.05	-1.02	-0.92	-1.31	-1.61	1.09	-3.2	-2.16	-1.8	-0.48	-0.36	-2.61	-7.4	2.49
Gb_31924	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_32171	-	-	0.36	2.07	-	-	-	-0.28	-1.17	1.1	-	-	-0.94	0.98	-	1.29	0.98	-	2.07	-
Gb_32332	2.24	1.95	2.42	1.91	0.44	-	-2.39	-1.24	-	-	-	-	-	-	-	-	-3.01	-2.29	-	-
Gb_32939	0.82	-	1.69	-	-	-	-	-3.83	-	-	-	-	-	-	-	2.39	2.81	-	1.42	-
Gb_32992	-	-	-	-	-	2.47	-1.06	2.07	0.66	1.67	0.61	-1.23	-0.11	-	1.11	-	-	-	-	-
Gb_33024	1.09	-	-	-	-	-	2.35	1.67	2.29	-	-	-	-	-	-	-	-	-	1.04	1.4
Gb_33694	2.56	-	0.08	3.63	-	-	-0.92	-3.13	-	-	-	-	-	-	-	-	-	-	-	-
Gb_33777	-	-1.85	-3.08	-	-2.41	2.03	-0.11	2.9	-	-	-	-	-	-	-	-	-	-	2.79	-
Gb_34538	0.87	-1.06	-1.49	-0.77	-0.36	-3.02	0.16	-0.92	0.6	-1.05	-0.97	-3.59	-1.92	-4.68	-0.81	0.04	-1.9	-1.82	0.38	2.97
Gb_35683	1.68	-	1.6	-	-	0.8	-	1.31	-	-	2.09	0.65	1.43	-0.9	-	-	-	-	-1.04	-
Gb_35714	-	-	-	1.75	-	-	-	0.71	-	0.29	2.01	-2.06	0.11	-	-	0.2	-	-2.99	2.84	-
Gb_35996	-	-	-	-	-	2.86	-	1.32	1.81	-	-	-	-1.0	-	-	-	2.64	-	-	-
Gb_36336	-1.58	-	-	-	-0.53	3.15	-	1.52	0.88	0.84	-	-1.55	-1.86	-	0.16	-	-0.58	-	-	0.22
Gb_37132	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_37598	2.17	2.51	2.41	1.24	0.47	-	-2.69	-3.24	-	-	-	-	-	-	-	-	-	-1.12	-6.46	-
Gb_37600	-0.15	1.41	3.69	0.63	0.56	-	-	-1.03	-	-	-	-	-	-	-	-	-	-	-	-
Gb_37650	-	-	-	-	-	-	-	0.72	1.06	-	2.6	1.86	-	2.72	-	-	-	-	-	-
Gb_37848	1.98	-1.72	0.23	1.99	-0.14	-1.27	1.34	-0.2	-1.97	-2.8	-0.19	-0.76	-1.79	-2.38	-0.29	-1.83	0.69	-0.3	-	-6.86
Gb_38038	1.44	-1.1	1.64	2.05	0.5	-0.16	-0.96	-0.28	-1.7	-2.73	-2.13	-1.72	-2.37	-2.89	-2.43	-1.54	-0.83	0.4	0.77	-1.08
Gb_38506	-	-	-	-	-	-	-	2.29	-	-	-	-	3.92	-	-	-	-	-	-	-
Gb_38722	-	-	-	-	-	-	-	2.05	-	-	-	-	-	-	-	-	-	-	3.99	-
Gb_39048	-0.04	-	-	-1.29	-	-	-0.29	-1.32	1.85	-	1.67	-5.97	-5.17	-	-0.79	-	-	-1.58	0.11	3.1
Gb_39210	-2.85	-	-5.42	-	0.44	2.89	-	1.1	0.45	0.72	0.29	-0.85	-2.74	-2.18	-0.01	-	0.36	-1.91	-0.34	-1.28
Gb_39441	0.78	-	-	-	-	-	2.02	-0.76	-	-	-	-	-	0.28	-	-	-	-	3.21	1.66
Gb_39886	-0.31	-	-	-	-0.25	1.97	1.98	0.16	-	-	-	-	-	-	-	-	-	2.5	-0.23	1.52
Gb_41267	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_41276	-	-	-	-	-	-	-	4.32	-	-	-	-	-	-	-	-	-	-	-	-
Gb_41404	1.85	2.84	2.03	0.86	0.06	-	-3.15	-0.68	-	-	-	-	-	-	-	-	-	0.63	-	-
Gb_41481	2.91	1.0	-0.28	-1.27	-0.71	-1.77	2.68	-1.35	-4.24	-2.79	-3.04	-5.92	-3.32	-4.42	-3.16	-1.95	-	-0.56	-	-
Gb_41633	1.05	0.05	-0.95	-	0.19	-	-2.49	0.46	-0.0	0.11	0.12	0.47	-3.6	-1.12	-	1.63	2.26	-1.14	-	-1.94

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.