Heatmap: Cluster_16 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
-3.35 - -3.24 -1.1 -0.54 3.66 0.69 -1.35 - -5.2 - -3.47 -4.67 -4.28 -1.98 -2.69 -4.28 -4.56 0.55 0.83
- - - - - 4.28 -2.92 -3.29 - - - -5.36 - - - - - - -6.0 -1.92
0.04 -1.99 1.05 -1.45 -0.48 2.84 0.15 -1.92 -3.24 -1.63 -0.65 -2.5 - - -0.0 -0.76 -0.19 0.05 -1.5 0.93
-0.93 -0.38 -1.7 -2.01 -0.93 3.26 -2.63 -2.28 -3.27 -2.23 0.27 -4.21 -3.46 -4.6 1.45 -3.31 -2.98 -0.84 -1.35 1.05
0.33 -0.15 -0.67 0.86 0.9 2.25 -1.27 -0.84 -1.72 -2.47 -2.84 -1.66 -2.34 -2.26 -2.7 -1.02 -0.79 0.43 -1.58 1.84
-0.18 0.45 -0.06 -0.48 1.17 2.23 -2.31 -0.74 -1.91 -2.58 -3.54 -1.47 -2.76 -2.72 -3.36 -0.44 -0.3 0.82 -0.58 1.61
-4.28 -5.12 -2.37 -3.59 -2.16 4.26 -3.52 -7.94 - -8.06 - -9.28 - - - -5.88 -3.76 -5.66 -8.78 -3.74
0.22 -1.25 -0.66 -0.35 -0.0 3.88 -2.58 -5.22 -8.7 -4.43 - -5.64 -7.78 -7.55 - -4.42 -1.1 -2.38 - -1.53
0.25 -0.82 -0.26 -0.29 0.53 3.73 -0.26 -5.47 -6.91 -5.52 - -7.21 - -6.38 - -3.3 -3.83 -1.58 -5.58 -1.08
-0.39 -0.59 -1.14 -1.87 0.85 3.83 0.35 -5.94 - -7.14 - -8.18 - -7.79 - -6.11 -5.28 -1.61 -6.91 -3.01
1.53 -0.18 0.47 -0.18 0.02 3.52 -1.94 -4.53 -5.86 -2.75 - -6.23 - -6.84 - -5.5 -1.98 -1.05 -6.07 -1.98
1.23 1.73 0.57 - 2.25 2.91 - -2.95 -1.12 - - - - - - - - - - -
-6.45 -7.23 -6.1 -4.37 -1.33 3.53 -3.51 -1.63 -0.94 -0.24 -0.04 -3.77 -2.45 -1.41 1.31 -2.35 -1.29 -0.93 -4.66 -0.04
-4.45 - -7.52 - -1.08 3.77 -2.84 -1.63 -3.13 -0.5 -0.76 -3.76 -1.67 -2.13 0.49 -14.0 - -1.12 -3.34 0.45
- - - 0.25 - 4.08 -2.84 -4.74 - - - - - - - - -2.55 - 0.4 -2.23
0.49 - 1.64 - -1.37 3.85 - -5.47 - - - - - - - - - -0.56 - -
-1.17 -5.36 -3.02 -1.75 -0.72 3.95 0.5 -3.9 -4.59 -5.13 -2.8 -6.39 -5.99 -6.05 -1.14 -4.76 -3.28 -2.65 -2.07 -1.64
-0.67 -3.15 -1.48 -0.87 -0.36 3.12 0.36 0.21 -0.65 -0.97 -0.54 -1.22 -3.13 -2.98 -0.46 -0.67 0.26 -0.52 -0.97 -2.76
-0.95 -3.26 -0.39 -0.89 -0.37 3.44 -0.2 -0.25 -1.41 -1.09 -1.19 -2.3 -5.03 -2.29 -0.78 -1.53 -0.51 -0.83 -0.7 -2.11
-2.99 - -5.04 1.2 0.86 3.4 - -3.02 - -5.0 -4.23 -2.77 -3.0 -3.21 - -1.23 -0.74 -0.58 -5.79 1.54
- - - - - 3.96 - - 0.6 - 1.52 - - - - - - - - -
-2.08 -1.98 -2.08 1.77 0.86 2.95 -7.7 -0.54 -1.54 -1.45 -2.64 -1.42 -3.16 -2.88 -2.62 0.63 -0.2 0.6 -5.51 -6.82
- - - - - 4.0 2.0 -6.41 - - - - - - - - - - - -
0.48 -2.25 -0.12 1.21 -0.88 3.53 -0.21 -1.87 -5.25 - -6.25 -3.63 -4.95 -5.7 -6.31 -2.82 -2.22 -1.64 -3.42 0.01
- - - - 1.83 3.65 - -2.03 - - - - - - - - - - 1.85 -
- - - - - 4.31 - -2.59 - - - - - - - - - - - -
-3.0 - - - -2.87 3.92 -4.3 -3.48 -7.04 -3.98 0.43 -3.25 -1.35 -4.11 1.04 - - - - -1.32
- - -8.39 - -6.29 4.32 -7.41 -8.58 - - - - - - - - - -7.49 -9.85 -5.96
- - - 3.39 - 3.18 - - -1.2 - - - - - - - - - - -
-5.18 -8.78 -6.16 -1.1 -1.05 3.86 -0.79 -1.9 -3.43 -3.62 -2.4 -4.45 -4.86 -4.78 -0.84 -1.11 -0.11 -1.47 -5.54 -0.26
-6.6 -9.78 -8.56 -6.07 -4.48 4.2 -2.35 -6.72 -7.63 -8.61 -9.96 -9.84 -9.81 -8.48 -10.16 -5.99 -7.35 -1.41 -6.73 -0.14
0.24 1.64 - - -2.11 3.73 - -2.79 -1.91 0.41 - -0.99 - - - - - - - -
0.56 -0.37 0.21 0.73 1.0 1.84 -1.28 -0.06 -0.76 -0.55 0.22 -1.27 -0.09 -0.54 0.15 -2.08 -1.37 -0.98 -0.33 -1.08
-3.46 -4.08 -6.09 -3.43 -0.35 3.94 -3.95 -2.6 -4.78 -4.85 -1.25 -3.59 -3.52 -4.21 0.01 -3.77 -2.95 -2.22 -2.02 0.06
- - - 2.37 - 3.47 1.4 - - - - -1.14 -0.67 - - - - - - -
-4.54 -3.5 -1.83 -5.55 -1.14 3.57 -3.82 -2.51 -2.56 -2.9 -2.29 -4.03 -3.76 -3.54 -1.14 -5.09 -2.89 -1.77 -4.07 2.39
-4.69 -3.41 -3.51 -1.88 0.03 3.83 -6.09 -2.88 -3.78 -3.49 -6.92 -3.61 -6.76 -5.21 -6.6 -2.88 -0.1 -1.15 -3.97 1.13
-3.01 - - - - 4.03 0.36 -1.69 -3.59 - - -2.21 - -1.92 - - - -0.17 -3.61 -1.26
-6.89 -7.36 -4.48 -4.23 -3.21 4.17 0.51 -4.05 -8.28 - - -10.4 -9.23 -8.59 -9.71 -8.82 - -3.66 -8.76 -2.16
-2.97 -3.79 -0.91 -4.24 -3.53 4.22 -1.83 -6.45 -7.63 -7.36 -8.64 -9.41 -8.88 -9.0 - -6.84 -5.94 -4.4 -7.29 -3.61
- - - - - 4.32 - -9.64 - - - - - - - - - -4.3 - -
- - - - - 4.32 - - - - - - - - - - - - - -
- - - - - 4.32 - - - - - - - - - - - - - -
-3.38 - - 1.14 0.31 2.93 -6.35 -1.94 -5.59 -5.34 -4.97 -8.44 - -6.3 -3.84 0.75 1.4 -0.34 -6.5 1.72
-2.13 - - 0.08 0.92 3.03 -2.87 -4.75 - - - - - -7.65 - -5.45 -1.2 1.93 1.07 1.07
-4.52 - -3.04 -2.34 -0.8 4.01 -0.05 -2.89 -4.45 -4.61 -2.43 -4.87 -6.06 -6.11 -0.59 -3.02 -1.99 -1.88 -9.32 -2.68
-2.15 -2.01 -2.08 -0.35 0.55 3.43 -1.6 -1.72 -4.21 -4.17 -0.09 -3.24 -5.53 -5.81 1.13 -2.79 -1.76 -1.33 -0.88 -0.2
0.23 -1.18 0.44 0.99 0.7 3.28 -3.36 -2.27 -3.31 -3.15 -2.23 -3.4 -3.04 -3.36 -2.29 -2.55 -2.19 -0.36 -0.85 -0.39
- - - - - 3.65 1.76 -1.14 - - - - - - - - - - 1.84 -
- - - - -3.35 3.8 -0.56 -2.56 - - - - - - - - - 2.11 - -0.37
0.54 -1.77 -0.86 -0.81 1.19 2.8 -0.66 -1.08 -0.66 -0.67 -2.21 -1.39 -2.51 -2.08 -1.21 0.77 -0.86 -0.52 -3.05 0.01
1.73 -0.23 -1.55 0.39 -0.08 3.06 -5.11 -1.54 -1.66 -0.97 0.04 -1.05 -2.78 -3.23 -0.64 -2.36 -0.93 -1.64 -9.13 -2.06
-0.7 - - 0.19 1.71 2.85 - -1.58 -3.53 -4.2 -4.45 -4.0 -4.79 -4.31 - 0.6 0.11 0.7 -3.59 1.46
- - - - - 4.04 1.3 - - - - - - - - - - 0.17 - -
-0.77 0.37 0.21 -0.88 0.36 2.88 0.22 -0.84 -0.5 -1.57 -0.49 -1.28 -2.56 -2.94 -0.38 -0.79 -0.64 -1.01 -0.99 -0.74
-2.15 - -2.75 -0.05 - 3.81 0.15 -2.98 -4.32 -3.61 -0.84 -4.53 -3.92 - -0.56 -2.46 -1.64 -0.61 -0.32 -
-2.37 - - 0.03 1.29 2.35 -0.68 -2.11 -2.06 -1.53 -1.98 -3.45 -6.25 -3.36 -1.83 0.93 1.84 0.82 -0.73 0.29
-1.41 -2.26 -3.43 -1.72 -3.33 3.32 1.46 -1.9 -2.28 -0.65 0.29 -2.75 -1.58 -4.89 0.13 - - -3.47 -0.65 0.62
-1.09 -1.0 - - -2.16 2.54 1.78 -1.48 -0.68 -0.99 0.37 -1.79 0.98 -0.31 0.23 - - -2.34 -0.68 0.78
- 0.22 - - - 2.75 1.31 -0.62 -0.47 0.07 0.03 -2.26 0.26 -0.39 0.16 - - - 0.37 0.7
-2.74 - -1.45 -2.94 -4.55 4.12 0.49 -3.75 -5.62 -4.11 - -3.74 -4.15 - -4.19 -5.36 - -3.24 -5.5 -
-2.7 -2.63 -4.38 -3.01 -1.55 3.93 -2.66 -1.74 -3.32 -2.51 -2.43 -2.21 -3.91 -4.06 -1.54 -3.47 -2.36 -1.17 -3.65 0.59
-2.5 - -5.43 0.23 1.23 2.66 -3.07 -4.66 - - - -6.46 - - - -3.26 -1.48 2.24 1.13 1.27
- -0.99 - 0.05 0.6 4.0 - -3.4 - - - -3.95 - - - -1.87 - - - -0.87
-1.67 -3.04 -2.4 -0.22 -0.61 3.5 -4.87 -0.65 -2.13 -2.35 -2.09 -1.02 -1.71 -0.18 -1.55 -0.61 -0.79 -0.17 -5.8 0.12
-1.15 -0.65 -0.77 -0.87 -0.47 3.1 -3.16 -1.1 -1.29 -1.5 -0.29 -1.74 -1.45 -1.57 0.23 -1.37 -1.16 0.66 -1.1 0.34
-1.94 - -6.38 -2.24 -5.53 3.9 -3.49 -2.31 -5.63 -4.17 -6.57 -5.91 -6.31 -5.42 -5.17 -5.83 -5.41 -1.91 -3.31 1.87
-2.67 -3.97 -3.9 -2.68 -2.1 2.69 -8.4 -0.18 -1.32 -0.45 1.3 -0.22 -0.16 -0.26 1.5 -1.65 0.11 -0.65 -2.37 -0.47
-0.49 -2.52 - -3.56 -1.23 4.14 - -5.56 -4.22 -1.75 -5.31 - - -3.51 -5.35 - - -3.81 -6.9 -1.62
-3.87 - -5.93 0.26 -1.62 3.56 -7.93 -2.48 -5.95 -7.95 -6.36 -3.43 -3.34 -2.7 -5.93 -4.0 -3.08 -4.35 -5.41 2.53
- - - - - 4.16 0.45 -5.59 - -7.32 - -8.29 -7.85 - - - - -6.68 -5.77 -0.5
-2.83 -2.79 -2.32 -1.37 1.64 3.32 -4.2 -1.98 -3.99 -4.22 -5.03 -5.31 -5.68 -4.47 -3.72 -0.03 0.79 0.76 -3.17 -0.14
- - - - 1.1 3.64 - -1.12 -0.71 - - 1.17 - - - - - - 1.04 -
0.13 - -2.66 -1.95 -2.56 3.47 - -0.47 -1.58 -1.15 -1.73 -1.43 -1.4 -1.79 -1.83 -0.43 1.3 -0.83 -4.21 -1.87
- - - - - 3.85 1.86 -2.8 -1.77 - - - -1.41 - - - - -0.24 -1.71 -
-3.12 -6.61 -4.16 -6.33 -2.22 4.05 1.6 -9.25 - - - - - - - - - -7.19 - -5.31
-3.54 -3.4 -4.08 1.63 0.32 3.24 -1.49 -0.94 -1.28 -1.33 -1.62 -4.03 -2.41 -1.86 -1.49 -1.5 -0.39 -0.12 -2.7 -0.16
-0.01 -4.58 -2.69 -5.33 -1.69 4.07 -6.08 -3.09 -4.33 -3.97 - -9.55 - - - -6.23 -4.42 -0.42 -6.75 -0.73
-0.09 -0.37 0.09 -0.17 0.47 2.3 -0.69 -0.36 -0.66 -0.72 0.34 -0.96 -1.35 -1.42 0.27 -0.76 -0.71 -0.69 0.24 -0.69
-0.0 -0.96 -0.24 0.12 0.36 1.93 -0.53 -0.16 -0.36 -0.34 0.48 -0.77 -0.61 -0.63 0.42 -0.38 -0.46 -0.55 -0.17 -0.69
1.37 - -0.23 - - 3.42 - -1.98 - - - -2.01 - - - - - - - 2.42
- - - - - 4.09 - -1.02 - - - - - - - - - - 1.28 -
- - - - - 4.32 - - - - - - - - - - - - - -
-0.79 0.73 -2.92 - -3.35 3.36 0.3 -2.89 -2.55 -0.73 -5.2 -0.69 -3.0 -1.11 -5.56 -1.51 -2.23 -4.41 -4.93 1.7
0.61 1.41 -1.67 -1.71 -0.08 3.43 -3.94 -2.8 -5.1 -4.22 -4.86 -1.03 - -7.94 -5.09 0.44 -2.26 -0.15 -6.01 -2.89
-3.29 -3.25 -2.63 -2.95 -2.15 3.06 -0.2 -0.95 -0.23 -0.17 -0.28 -0.61 -1.37 -2.06 -0.17 0.57 0.01 -0.53 -2.34 0.49
-1.22 -0.99 -0.87 -0.22 0.47 3.25 -3.23 -1.71 -2.99 -3.51 0.14 -2.5 -2.39 -2.86 1.33 -2.68 -2.01 -1.05 -0.73 -0.97
-3.91 - - 1.62 0.93 2.88 -6.35 -1.7 -4.02 -4.81 -3.46 -2.99 -3.62 -3.19 -3.28 0.65 0.57 0.03 -3.68 1.34
-1.07 -1.2 -1.57 -0.45 -0.41 3.62 -0.22 -2.31 -4.88 -5.1 -2.02 -0.91 -5.63 -4.36 -2.03 -2.68 -3.32 -0.75 -5.24 0.91
-0.61 -0.67 0.01 -0.32 0.06 1.6 -1.12 -0.0 -0.81 -0.77 0.47 -0.18 -2.3 -1.97 0.8 -0.24 -0.18 0.76 -0.16 0.52
-1.76 -2.68 -2.04 -0.27 -0.73 2.2 -3.89 -0.41 -0.91 -1.09 0.76 -0.32 -1.83 -1.08 1.55 -0.65 0.03 0.19 -1.25 1.03
- - - - - 3.98 1.81 - - - - - -0.42 - - - - - - -
0.78 -1.73 -2.0 0.07 0.22 2.97 -3.19 -0.15 -0.23 -0.3 -1.99 -0.63 -0.72 -0.69 -2.05 -2.75 -1.49 -0.39 -2.13 0.19
-0.96 -3.36 -2.79 0.54 0.07 1.01 -2.03 -0.13 -0.72 -0.47 0.92 0.63 -0.56 -0.53 1.0 0.18 0.57 0.17 -2.4 0.59
-1.45 - - 0.14 0.1 3.44 -3.03 -0.63 -4.3 -5.44 -3.38 -15.03 -0.92 0.32 -0.53 -1.85 -12.6 1.24 -1.68 -2.22
-1.18 -1.44 -2.87 -1.7 0.36 3.23 -2.69 -0.66 -0.73 -0.41 -0.56 -0.27 -2.0 -2.27 -0.74 -0.24 -0.01 -2.54 -3.99 0.41
- - - - - 4.27 - -0.48 - - - - - - - - - - - -
-3.31 -3.82 -4.71 -3.32 -2.22 3.74 -7.23 -1.23 -0.76 -1.72 -0.45 -0.75 -0.58 0.06 -0.58 -1.88 -1.72 -2.14 -2.6 -3.37
- - -8.33 - -6.68 4.32 -7.94 -8.71 - - - - - - - - - -8.37 -9.92 -6.21
-6.91 - -6.25 -1.65 -7.78 4.28 -8.56 -6.27 -6.55 -7.75 - -9.72 - -9.33 -8.17 -6.07 -6.44 -5.51 -2.5 -5.0
- - -5.71 -2.34 -1.79 3.76 -5.72 -2.92 -2.85 -2.77 -0.81 -3.05 -3.8 -4.45 0.38 -1.73 0.05 -1.51 -1.64 0.5
- - - - - 3.66 - - 0.75 - - - 0.99 - - - - - 1.88 -
-1.0 0.43 -0.27 -0.08 -0.13 3.65 -1.63 -1.67 -3.3 -3.97 -2.83 -3.41 - -7.18 -1.79 - -1.6 -1.35 -2.99 -0.4
-7.1 -4.41 -4.58 -2.87 -2.36 4.05 -3.05 -2.16 -3.67 -3.59 -2.26 -4.72 -5.27 -4.71 -0.56 -2.42 -1.49 -1.59 -5.21 -0.65
-4.54 - - - -3.45 4.2 -3.26 -4.38 -4.44 -3.69 -4.26 -8.14 -2.25 -4.15 -6.41 - -3.87 -1.46 -4.57 -1.3
-2.73 - - - -3.63 4.16 -4.52 -4.08 - - - - -3.46 -4.25 -4.01 - - -0.25 -4.46 -0.65
-2.47 -3.16 -1.0 -0.57 -0.15 0.9 -1.19 -0.02 -0.89 -0.37 1.56 -1.43 0.42 -0.06 1.64 -1.48 -0.3 0.77 -1.04 -0.08
-7.9 -4.15 -4.76 -4.7 -0.68 3.2 -3.94 -0.87 -0.84 -0.75 1.54 0.53 -1.0 -0.69 1.14 -4.55 -1.79 -2.57 -4.84 -4.49

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.