Heatmap: Cluster_219 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
-1.6 -5.55 -8.91 5.13 1.56 0.88 1.92 1.55 -0.12 - - - -8.25 -10.06 -9.4 -3.46 -5.96 -9.93 -9.09 - - - - -10.09 - -6.31 - - - - - - - - - - - - - - - - - - - - - -
-6.9 - - 3.96 1.33 3.52 3.07 3.18 -0.3 - - - -6.12 - - -3.22 -5.55 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.9 - - 5.33 0.13 0.87 1.5 0.41 -0.72 - - - -7.33 - -10.03 -6.23 -7.98 - - - - - - -8.04 - -6.83 - - - - - - - - - - - - - - - - - - - - - -
-1.99 0.64 0.31 4.88 0.56 -0.0 -0.56 -2.2 1.34 - - -4.31 - - -6.85 -1.88 -0.91 0.75 -1.9 -0.49 -3.71 -1.21 -2.61 1.87 0.04 -2.55 -3.18 - - -6.27 - - -4.05 - - - - -4.15 - - -3.65 - -4.15 - - -3.67 - -5.84
- -0.04 -1.59 4.52 2.81 2.88 1.88 2.0 -2.61 - -5.86 - - - -7.39 -4.14 -4.69 -2.79 - -3.82 - -4.14 - -0.32 -1.61 -7.53 -5.13 - - - - - - - - - - - - - - - - - - - - -
-5.28 -0.78 -0.88 4.23 3.1 2.56 2.53 2.34 0.1 - -5.4 -3.97 - - -7.95 -2.77 -2.87 -5.98 - -4.25 - - - -0.22 -2.71 -2.27 -5.67 - - - - - - - - - - - - - - - - - - - - -
-1.32 -0.04 0.9 3.32 -1.48 2.83 2.73 2.44 -1.73 -1.57 -5.43 -7.27 -3.1 -3.86 -2.11 0.11 -1.59 -1.2 -1.47 -0.28 -0.73 -0.61 -3.13 -2.57 -1.0 -1.9 -2.7 0.61 0.53 -1.59 -0.7 -0.33 -2.0 -1.97 -3.32 -1.41 -1.15 -0.71 -3.44 -2.85 -2.61 -4.77 -4.78 -2.53 -3.57 -1.03 -2.55 -0.97
0.05 - - 4.24 2.15 2.71 2.85 2.54 0.45 - -5.49 - - - -8.99 1.2 -2.17 - - - - - - -5.37 - -3.01 - - - - - - - - - - - - - - - - -5.2 - - - - -
- - - 5.09 2.93 0.71 1.87 0.12 - - - - - - -8.67 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-1.69 -3.2 -6.99 4.41 1.51 2.81 3.42 2.29 -0.62 - - - - - - -3.16 -5.34 - - - - - - - - -4.53 - - - - - - - - - - - - - - - - - - - - - -
-6.3 -0.69 1.17 3.66 2.48 2.32 1.78 2.03 0.74 -3.28 -6.34 -4.05 -2.67 -3.14 -4.06 - -1.08 0.04 -0.82 -0.98 -0.48 -0.41 1.03 -0.59 -0.44 -0.58 -0.98 -2.51 -3.14 -2.45 -3.57 -2.28 -3.18 -3.66 -3.56 -6.49 -5.07 -1.6 -3.22 -1.45 -1.82 -2.2 -2.98 -1.93 -3.35 -1.21 -2.89 -3.15
0.51 - - 4.2 2.1 2.98 3.12 2.31 -0.02 - - -3.35 - - - -0.89 -1.72 - - - - - - - -2.57 -2.02 - - - -4.79 - - - - - - - - - - - - - - - - - -
-6.34 -1.19 -1.3 3.89 1.14 2.5 1.89 2.53 -0.41 -2.89 - -6.22 -3.36 -4.28 -1.86 -0.39 -2.58 -0.84 - -3.7 -2.66 -1.56 -1.96 -2.56 -2.9 -1.81 -4.65 -0.31 0.04 -2.81 -0.54 -3.56 -0.35 0.06 0.1 0.34 0.78 -1.14 -1.99 -3.57 -4.44 -4.2 -3.65 -3.53 -3.73 -1.3 -4.2 -1.15
-2.1 -6.05 -4.54 4.95 1.76 1.05 2.4 2.22 0.3 - - - -8.54 - -9.88 -2.46 -6.1 - -7.12 - -9.11 - - -9.7 - -6.7 - - - -13.02 - - - - - - - - - - - - - - - - - -
-1.26 -0.26 0.88 3.77 1.73 2.14 2.29 2.13 0.09 0.35 -5.38 -7.32 -1.37 -1.55 0.1 -3.83 -0.19 -1.61 -1.26 -1.49 -1.72 -1.86 -1.11 -4.25 -2.41 -2.1 -2.42 -0.42 -1.21 -1.84 -2.55 -1.85 -1.45 -0.98 -1.23 -1.07 -0.45 -1.2 -2.84 -3.7 -5.56 -5.32 -4.18 -2.8 -2.75 -1.27 -4.19 -1.08
-1.57 -1.92 -0.91 4.02 -0.25 2.92 3.15 3.04 -0.07 -2.84 -4.75 -3.99 -3.5 -3.9 -2.54 -1.99 -3.17 -3.02 -1.66 -2.28 -2.87 -2.89 -4.61 -4.19 -2.89 -1.74 -3.03 -3.3 -3.64 -3.39 -2.35 -4.7 -4.78 -3.56 -5.72 -3.58 -3.8 -2.73 -4.91 -3.92 -3.61 -4.64 -3.95 -5.02 -6.03 -3.29 -3.15 -3.21
-1.85 -5.2 -2.09 4.39 1.89 2.7 3.01 2.71 0.29 -8.12 - - -6.12 - -7.69 -3.8 -3.09 -5.17 -3.63 -5.12 -4.45 -6.59 -7.02 -4.66 -7.1 -5.72 -9.92 -7.69 - -8.33 -10.12 -8.74 -9.52 - - -9.44 -9.37 -7.44 -7.39 -8.74 - - -8.18 -7.97 -8.29 -6.51 - -8.46
-0.83 -2.34 -0.97 4.17 1.09 2.73 2.9 2.5 0.86 -1.83 -5.16 -4.57 -2.34 -3.23 -2.52 -3.34 -2.08 -2.9 -2.02 -2.77 -3.15 -2.81 -3.21 -4.31 -2.81 -2.65 -3.45 -3.02 -3.9 -3.16 -3.69 -4.43 -3.15 -2.98 -5.93 -2.68 -3.28 -1.77 -2.9 -3.14 -3.39 -3.66 -3.26 -2.87 -3.95 -1.99 -2.25 -2.7
-1.44 -3.37 -2.33 4.27 1.84 1.76 3.15 2.82 -0.35 -2.68 -6.91 -7.81 -2.46 -2.68 -3.78 -1.42 -2.4 -3.15 -2.02 -1.89 -3.6 -3.86 -6.99 -2.73 -1.84 -2.83 -2.63 -3.24 -3.57 -4.17 -3.43 -3.33 -4.04 -3.67 -3.19 -3.62 -2.63 -2.88 -4.64 -4.11 -3.47 -3.72 -3.25 -5.28 -4.57 -2.94 -6.01 -3.51
-8.13 -3.31 -3.38 4.53 2.66 2.34 2.75 2.18 0.88 - - - -9.56 -8.96 -9.41 -2.95 -4.16 -7.61 - - - - - - - -4.57 - - - -11.47 - - - - - - - - - - - - - - - - - -
-1.69 -3.2 -6.99 4.41 1.51 2.81 3.42 2.29 -0.62 - - - - - - -3.16 -5.34 - - - - - - - - -4.53 - - - - - - - - - - - - - - - - - - - - - -
- - -3.16 4.44 -0.49 3.46 2.65 2.95 -2.52 - - - - - - -2.17 -3.95 - - - - - - - - -5.88 - - - - - - - - - - - - - - - - - - - - - -
- -2.95 -5.05 4.91 -0.11 2.54 2.4 2.07 -0.64 - - - -8.59 - -9.18 -0.33 -5.14 -8.85 - - - - - -6.4 - -6.56 - - - - - - - - - - - - - - - - - - - - - -
- -0.77 1.4 4.0 2.73 2.24 2.32 2.47 0.24 -4.58 - - -5.45 - -4.67 -3.57 -0.41 -2.28 -0.48 -2.04 -2.67 -2.08 0.1 0.09 -3.98 -1.39 -5.9 -3.42 -5.57 -5.33 -5.36 -5.96 -5.89 -5.0 -6.08 -4.61 -3.67 -5.33 -6.2 -5.63 -5.81 -4.28 -5.6 -5.63 - -4.1 -5.67 -4.65
- -5.74 -6.74 4.72 0.82 2.5 2.83 2.4 0.78 - - - - - - - - - - - - - - - - -4.34 - - - - - - - - - - - - - - - - - - - - - -
-0.9 0.05 - 4.38 -2.22 2.75 2.95 2.86 1.13 -5.88 -6.89 - -5.76 - -5.69 -0.3 -3.22 -5.29 - - -5.18 -6.9 - -5.77 - -2.94 - -6.8 -5.6 -5.92 -5.96 -5.47 -6.75 - - -5.1 - - - -5.11 - - -6.6 -3.87 -4.35 -7.02 -4.75 -
-1.83 -10.39 -9.64 5.18 0.86 1.57 1.75 1.53 -1.39 - - - -9.76 - -10.8 -7.64 -7.06 -9.65 - - - - - - - -8.06 - - - - - - - - - - - - - - - - - - - - - -
-2.98 -1.26 0.19 4.0 1.44 1.09 1.27 1.15 -0.26 -1.42 -3.45 -3.56 -0.95 -1.47 -1.27 -0.66 -1.42 -1.29 -0.82 -1.11 -0.2 -0.72 -1.81 -1.07 -0.74 -1.16 -2.03 -0.36 0.18 -1.28 -0.09 -2.68 -0.83 -0.21 -0.35 0.29 -0.74 -0.71 -0.94 -1.91 -2.03 -2.07 -1.93 -0.77 -1.49 -0.71 -0.68 -1.15
-6.49 0.05 -0.89 4.43 0.89 2.69 2.71 2.47 -0.78 -3.64 -6.55 - -5.32 - -4.07 - -7.5 -2.96 -4.77 -4.63 -4.07 -5.47 - -3.64 -7.98 -4.43 -5.49 -2.14 -3.68 -2.26 -2.07 -4.86 -2.21 -2.48 -5.0 -1.08 -2.2 -2.49 -3.55 -3.66 - -5.39 -5.14 -2.08 -5.04 -2.55 -1.37 -2.75
-1.54 -5.07 -4.64 4.44 2.91 1.69 2.87 2.57 0.72 - - - - - -9.07 -4.18 -2.74 -8.29 - - - - - -8.18 - -3.48 - - - - - - - - - - - - - - - - - - - - - -
-0.14 -0.97 -4.68 5.08 2.19 0.59 1.27 1.16 0.68 - - - - - -9.49 -3.25 -3.36 - - - -5.31 - - - - -3.4 - - - - - - - - - - - - - - - - - - - - - -
- 1.06 -5.22 5.1 -0.22 0.78 1.7 -1.2 1.25 - - - - -5.05 -7.64 -2.33 -2.06 0.02 -4.38 -3.58 -2.23 -2.24 -4.09 -1.84 -2.53 -4.46 -4.01 - -5.69 -6.92 - - -6.18 - - -5.06 - -4.54 - -5.13 -4.13 -5.29 -5.64 -5.92 - - - -7.02
- -1.72 -4.17 4.57 3.2 1.72 2.01 2.21 0.93 - - - - - -7.95 -1.54 -2.44 - - - - - - -3.0 - -2.24 - - - - - - - - - - - - - - - - - - - - - -
-1.55 -2.82 -1.98 4.4 1.96 2.69 2.88 2.5 -0.09 -4.35 -9.46 -10.42 -5.4 -5.46 -5.17 -2.48 -3.25 -2.62 -2.66 -3.5 -4.29 -4.78 -4.14 -3.14 -4.81 -3.65 -6.17 -3.34 -5.75 -5.0 -4.75 -4.74 -5.43 -4.54 -5.61 -5.11 -4.41 -4.46 -6.46 -5.89 -6.74 -6.69 -5.98 -5.83 -6.27 -4.5 -6.28 -5.15
-0.25 - -2.86 4.66 1.4 1.94 2.84 2.66 0.62 - - - - - -9.54 -2.47 -3.83 -7.4 - - - - - - - -4.25 - - - -9.62 - - - - - - - - - - - - - - - - - -
0.43 1.07 0.54 4.23 -1.25 1.71 1.93 1.87 -2.8 -1.94 -1.75 -2.59 -3.27 -4.67 -2.21 1.1 -0.08 0.36 -3.7 -0.23 0.38 0.24 -1.92 -0.62 -1.23 -0.93 -2.62 -2.3 -3.37 -3.29 -3.7 -4.98 -5.82 -5.18 -5.13 -4.38 -3.91 -2.05 -4.28 -3.44 -1.66 -3.14 -2.89 -3.28 -3.6 -3.96 -3.76 -2.89
-0.52 -1.37 -0.53 5.25 -3.1 -0.32 -0.76 0.11 1.17 - -3.53 -3.82 - - -0.51 -0.47 -3.42 -3.06 -0.56 - -3.98 - - -4.99 -5.49 -0.94 -7.1 -6.49 - -4.74 - -4.18 - -8.39 - -5.33 - -20.61 - - - - - - - - -19.03 -3.66
-2.05 -2.45 -0.28 4.13 2.66 2.28 2.28 2.23 -0.17 -1.94 -3.29 -3.38 -2.75 -3.68 -2.92 -2.73 -2.43 0.7 -2.13 -1.56 -2.49 -2.62 -2.64 -2.44 -1.38 -2.2 -3.34 -2.08 -3.29 -2.76 -1.73 -2.45 -2.74 -2.88 -4.01 -2.85 -1.9 -2.32 -3.81 -3.7 -4.61 -4.27 -3.64 -3.07 -3.73 -2.38 -2.28 -3.28
-1.46 - -3.69 4.48 3.17 1.09 2.5 2.24 1.74 - - - - - - -2.45 - - - - - - - - - -2.46 - - - - - - - - - - - - - - - - - - - - - -
-1.06 -3.02 -4.4 4.33 2.08 2.84 2.86 2.72 -0.19 -4.43 -8.64 -6.17 -3.45 -5.34 -5.72 -3.88 -4.81 -3.71 -5.52 -4.54 -6.74 -6.23 -2.96 -3.74 -4.52 -2.58 -7.01 -5.79 -6.79 -5.69 -6.18 -7.79 -6.04 -8.0 -7.48 -7.12 -6.43 -5.57 -6.96 -5.97 -7.72 -7.02 -5.72 -6.68 -7.21 -4.91 -5.72 -6.0
- -1.31 -1.87 4.11 2.56 2.93 2.63 2.99 -1.2 -5.52 - - - - -6.75 -1.49 -2.7 -1.25 - -4.32 -5.14 -3.48 - -1.67 -3.89 -4.57 - - -4.17 -6.24 -6.32 - - -5.81 - - -5.54 -4.21 - -5.07 - - - - -5.01 -3.15 - -4.35
-0.92 -2.38 -1.35 4.46 0.23 1.57 1.04 1.42 1.24 -0.61 -1.69 -2.11 -0.34 -0.68 -1.48 -1.32 -1.05 -0.98 -5.31 -3.02 -3.6 -3.71 -6.84 -0.82 -0.24 1.18 -1.55 -5.11 -1.66 -2.06 -3.72 -1.74 -3.3 -3.43 -1.73 -4.32 -3.53 -1.82 -4.46 -2.44 -0.41 0.01 -2.2 -4.09 -4.17 -1.75 -3.1 -1.43
-3.02 -2.87 -2.1 4.58 0.36 2.42 2.05 1.19 0.78 -3.61 -0.28 -0.09 - - -5.15 2.05 -0.71 -1.22 - - - -3.01 - - -2.15 -0.32 -3.42 -2.91 - -4.25 - - - - -3.36 - - - - - - -2.81 - - - - - -4.74
-4.24 - -4.21 4.37 2.59 1.92 2.79 3.0 1.18 - - - - - -9.32 -5.31 -3.18 - -4.69 - - - - - - -5.93 - - - - - - - - - - - - - - - - - - - - - -
-4.22 - -4.88 4.2 2.59 2.53 2.96 3.04 0.38 - - - - - -9.7 -1.7 -4.11 -9.82 - - - - - - - -4.97 - - - - - - - - - - - - - - - - - - - - - -
-2.31 -2.25 -1.86 4.32 2.15 3.05 2.72 2.6 0.44 -6.73 -5.89 -6.29 -7.27 - -7.27 - -3.06 -4.88 -4.7 -5.81 - -4.98 - -5.84 -3.8 -4.06 -4.22 -6.68 -7.01 -6.33 -6.41 -5.49 -7.65 -7.18 - - -6.91 - - -6.08 -6.46 -6.61 -6.96 - - -5.98 - -6.62
-3.38 -3.89 -5.49 5.24 -0.82 0.82 1.9 1.54 0.03 - - - -8.4 - -10.75 -4.83 -5.97 -9.81 - - - - - - - -7.11 - - - -12.04 - - - - - - - - - - - - - - - - - -
- 1.94 -0.21 5.01 -0.89 1.12 0.68 0.5 1.55 - - - - - - 0.48 -1.0 -2.98 - - - - - - - -1.81 - - - -7.47 - - - - - - - - - - - - - - - - - -
- - -6.3 4.29 3.21 2.35 2.79 2.79 -2.78 - - - - - -9.17 - -5.24 -7.29 - - - - - - - -4.38 - - - - - - - - - - - - - - - - - - - - - -
0.52 -0.1 - 4.8 0.17 2.06 2.32 2.34 1.09 - - - - - - - -2.19 - - - - - - - - -3.38 - - - - - - - - - - - - - - - - - - - - - -
- -0.03 -0.08 3.88 1.17 2.49 2.47 2.47 1.39 -5.78 - - -5.81 -5.21 -4.43 -3.05 -0.99 0.62 0.68 -2.12 -4.32 -1.61 1.35 0.09 -1.05 -0.34 -2.28 - - -8.04 - - - - - - -6.22 - - - -5.99 -4.14 -6.07 -6.78 -5.93 -5.5 - -5.36

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.