Heatmap: Cluster_256 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00002p00150300 (evm_27.TU.AmTr_v1.0_scaffold00002.118)
- -0.4 - -4.34 -0.05 - -3.76 -6.28 -1.58 -1.88 1.42 1.28 0.14 -0.25 0.43 -0.14 1.43 0.99 0.92 -0.02 0.77 -0.05
AMTR_s00002p00226970 (evm_27.TU.AmTr_v1.0_scaffold00002.252)
0.51 -1.1 0.18 0.17 -0.73 -5.41 -6.66 -10.19 -5.61 -5.97 1.4 0.56 -0.21 -0.5 -1.14 -0.04 0.87 0.91 1.0 1.17 0.28 -0.17
AMTR_s00002p00269010 (evm_27.TU.AmTr_v1.0_scaffold00002.545)
-0.79 -2.13 -1.3 -2.55 -1.75 -5.26 -2.4 - -2.42 -2.33 1.71 1.45 0.2 0.23 0.17 0.38 1.34 0.22 0.84 0.51 -0.36 0.32
AMTR_s00004p00029120 (evm_27.TU.AmTr_v1.0_scaffold00004.12)
0.23 -2.49 -4.4 -0.92 0.45 - -1.89 - -1.18 -1.43 1.14 0.79 0.66 0.06 0.23 0.07 1.08 0.84 0.34 0.49 0.08 0.28
AMTR_s00004p00154100 (evm_27.TU.AmTr_v1.0_scaffold00004.161)
-6.35 -4.43 0.13 0.07 -2.13 - -2.86 - -2.66 -3.09 1.36 1.01 -0.0 -0.51 -1.36 0.52 1.58 1.22 1.11 0.34 0.34 0.05
AMTR_s00005p00184610 (evm_27.TU.AmTr_v1.0_scaffold00005.64)
0.37 -3.14 - -2.01 -2.26 - -1.19 - -0.62 -0.54 1.78 1.02 0.37 -1.33 0.05 0.56 1.35 0.88 0.18 0.34 -0.22 0.07
AMTR_s00005p00256120 (evm_27.TU.AmTr_v1.0_scaffold00005.175)
0.11 -0.57 0.75 -0.68 -0.19 -4.22 -0.65 -1.61 -0.26 -0.36 0.76 0.61 -0.0 -0.08 0.14 0.28 0.67 0.31 0.15 0.64 -1.15 0.01
AMTR_s00009p00176380 (evm_27.TU.AmTr_v1.0_scaffold00009.107)
-3.24 0.37 - -0.85 -0.21 - -1.11 - -1.11 -1.32 1.01 1.16 0.56 0.19 -0.17 0.16 0.74 0.21 0.86 0.6 0.96 -0.16
AMTR_s00010p00042520 (evm_27.TU.AmTr_v1.0_scaffold00010.21)
- 0.64 -0.7 -0.25 -2.43 - -4.56 - -2.13 -2.74 1.29 1.33 -0.56 -1.01 -1.88 0.3 1.45 1.46 1.09 -0.07 0.5 -0.44
AMTR_s00010p00163020 (evm_27.TU.AmTr_v1.0_scaffold00010.125)
-2.17 0.54 -0.55 -0.17 -0.47 -5.77 -1.3 -7.69 -1.8 -1.7 1.18 0.87 0.42 0.12 -0.01 0.02 1.11 0.24 0.45 0.67 -0.03 0.27
AMTR_s00013p00197230 (evm_27.TU.AmTr_v1.0_scaffold00013.129)
-1.55 -0.44 -1.56 -0.12 -1.59 -7.51 -7.56 -6.74 -1.55 -1.56 1.18 0.79 0.3 0.22 -0.7 1.12 0.51 0.94 1.01 0.16 0.52 0.63
AMTR_s00016p00106660 (evm_27.TU.AmTr_v1.0_scaffold00016.68)
-2.09 -1.08 -1.57 0.18 -1.4 -7.78 -5.78 -8.37 -6.04 -5.56 1.58 1.03 0.46 0.27 -0.09 0.5 1.43 0.69 0.84 0.3 -0.37 0.37
AMTR_s00016p00215520 (evm_27.TU.AmTr_v1.0_scaffold00016.191)
-1.33 1.17 -0.11 -0.71 -0.61 -5.57 -2.95 -9.41 -2.82 -2.87 1.41 1.12 0.48 -0.31 -0.95 0.04 1.27 0.51 0.67 -0.11 -0.23 -0.06
AMTR_s00016p00259070 (evm_27.TU.AmTr_v1.0_scaffold00016.361)
0.53 -9.2 -0.23 -0.09 0.18 -7.17 -3.91 -3.82 -2.91 -2.81 0.97 1.1 0.49 -0.25 -0.17 0.8 0.83 0.62 0.68 0.2 0.01 0.2
AMTR_s00017p00247060 (evm_27.TU.AmTr_v1.0_scaffold00017.235)
-3.27 0.82 -3.13 0.13 -1.51 -3.24 -3.7 -8.2 -4.26 -4.08 1.65 1.24 0.15 -1.51 -2.22 0.57 1.58 1.09 0.59 -0.2 0.19 -0.03
AMTR_s00019p00093260 (evm_27.TU.AmTr_v1.0_scaffold00019.69)
- - - -0.32 -1.0 - -5.72 - -4.83 -5.16 1.39 0.47 -0.27 -1.68 -0.06 0.66 1.86 1.74 0.93 0.37 1.08 -0.69
AMTR_s00022p00240520 (evm_27.TU.AmTr_v1.0_scaffold00022.342)
-0.0 -1.54 -0.18 0.03 -1.21 -4.72 -1.84 -11.68 -1.72 -1.57 1.45 1.1 0.26 0.04 -0.49 0.23 0.61 0.84 0.87 0.56 -0.5 0.07
AMTR_s00023p00028640 (evm_27.TU.AmTr_v1.0_scaffold00023.6)
- - - -0.73 -3.66 - -6.44 -8.76 -5.0 -5.23 1.88 1.05 -0.74 0.37 -0.28 1.2 1.51 0.78 1.03 0.55 0.41 0.11
AMTR_s00023p00029140 (evm_27.TU.AmTr_v1.0_scaffold00023.7)
- - -0.1 -2.43 -3.18 - -5.05 - -4.6 -4.28 1.82 1.2 0.44 0.45 -0.29 1.02 1.42 0.77 0.84 0.33 -1.07 0.44
AMTR_s00025p00124790 (evm_27.TU.AmTr_v1.0_scaffold00025.114)
-0.32 0.23 -3.89 0.36 -1.38 - -3.16 - -2.48 -2.67 1.24 0.75 0.37 0.25 -0.3 0.57 1.32 0.93 0.45 0.25 -0.03 0.11
AMTR_s00025p00210690 (evm_27.TU.AmTr_v1.0_scaffold00025.279)
-2.13 -0.98 -2.16 -0.11 -1.23 -8.29 -6.09 -5.77 -5.84 -5.2 1.61 1.31 0.11 -0.5 -0.68 0.74 1.85 0.99 0.47 -0.07 -0.54 0.48
AMTR_s00026p00123370 (evm_27.TU.AmTr_v1.0_scaffold00026.56)
-0.27 -0.78 -1.55 0.36 -0.14 - -2.71 -3.16 -2.09 -2.42 1.42 0.9 0.34 -0.13 -0.4 0.42 0.79 0.75 0.87 0.5 0.0 -0.17
AMTR_s00029p00148220 (evm_27.TU.AmTr_v1.0_scaffold00029.175)
-2.25 0.13 -10.05 -0.05 -1.39 -4.57 -4.01 -9.89 -2.24 -2.23 1.42 1.47 0.52 -0.37 -0.63 0.06 1.79 0.85 0.42 -0.51 0.02 0.21
AMTR_s00030p00120950 (evm_27.TU.AmTr_v1.0_scaffold00030.69)
-0.7 -0.4 - -5.03 -1.77 - -5.26 - -2.56 -3.4 1.68 1.22 0.02 -0.51 0.62 0.0 1.47 0.8 0.77 0.31 0.71 0.18
AMTR_s00032p00104970 (evm_27.TU.AmTr_v1.0_scaffold00032.66)
0.02 -0.53 -0.93 -0.85 -1.01 -4.85 -1.29 -4.93 -0.9 -0.93 1.38 0.99 -0.02 -0.27 0.1 0.36 0.99 0.72 0.57 0.31 0.04 0.06
AMTR_s00036p00036310 (evm_27.TU.AmTr_v1.0_scaffold00036.9)
-0.68 0.12 -2.71 -1.99 -0.06 - -4.47 - -4.16 -3.96 1.25 0.82 0.9 0.22 -0.15 0.47 1.03 0.51 0.68 0.62 0.48 0.38
AMTR_s00039p00209870 (evm_27.TU.AmTr_v1.0_scaffold00039.178)
0.05 -0.02 -2.18 -0.55 -0.68 -6.36 -6.9 -8.56 -3.44 -4.67 1.49 1.32 0.83 -1.18 -0.08 0.44 0.93 0.63 0.34 0.41 0.24 0.31
AMTR_s00040p00229490 (evm_27.TU.AmTr_v1.0_scaffold00040.275)
-2.53 -0.41 -0.13 -0.45 -0.52 -6.18 -1.74 -2.73 -1.5 -1.59 1.12 1.24 0.76 0.03 -0.23 0.03 0.67 0.64 0.75 0.7 -0.07 0.07
AMTR_s00042p00136580 (evm_27.TU.AmTr_v1.0_scaffold00042.33)
- 0.29 - -6.94 -0.23 - -6.78 - -5.19 -5.91 2.06 1.15 0.68 -0.5 -1.26 0.32 1.79 0.86 0.8 -0.55 -0.36 0.01
AMTR_s00044p00046290 (evm_27.TU.AmTr_v1.0_scaffold00044.19)
- - - -0.08 -1.6 - -2.05 -8.34 -2.09 -2.37 1.45 1.24 0.51 -0.22 -1.37 0.67 1.37 1.07 1.26 0.35 0.1 0.35
AMTR_s00044p00046630 (evm_27.TU.AmTr_v1.0_scaffold00044.20)
-2.0 -0.5 - -0.18 -2.14 - -2.16 -2.09 -2.67 -2.4 1.44 1.17 0.79 -0.33 -1.4 0.46 1.22 0.86 1.3 0.33 -0.42 0.36
AMTR_s00046p00229830 (evm_27.TU.AmTr_v1.0_scaffold00046.173)
-1.87 -0.15 -2.53 -2.79 -0.81 -5.05 -3.47 - -2.55 -2.5 1.62 1.28 0.92 0.71 0.15 0.88 0.57 0.42 0.56 0.37 -0.42 0.18
AMTR_s00049p00194600 (evm_27.TU.AmTr_v1.0_scaffold00049.205)
-1.34 0.08 - -1.02 -0.62 - -4.16 -3.48 -3.06 -3.58 1.36 1.14 0.75 -0.05 -0.39 0.72 1.16 0.19 0.65 0.75 0.3 0.46
AMTR_s00049p00231960 (evm_27.TU.AmTr_v1.0_scaffold00049.284)
-0.58 -1.25 -1.29 0.66 -1.39 - -4.98 -6.7 -5.1 -4.54 1.4 1.19 0.43 -0.29 -0.45 -0.1 1.24 0.82 0.76 0.45 0.25 0.37
AMTR_s00055p00198590 (evm_27.TU.AmTr_v1.0_scaffold00055.138)
-0.27 -7.02 -0.97 0.03 -0.87 -7.15 -2.34 -5.06 -1.37 -1.42 1.45 1.24 0.29 0.09 0.04 0.99 1.06 0.34 0.46 0.11 -0.34 0.12
AMTR_s00056p00172610 (evm_27.TU.AmTr_v1.0_scaffold00056.150)
-1.73 0.33 -4.64 -0.5 -0.6 -2.33 -1.23 -7.93 -1.2 -1.29 1.24 0.82 -0.41 -0.45 -0.32 1.05 1.46 0.78 0.79 0.34 -0.21 -0.42
AMTR_s00058p00123890 (evm_27.TU.AmTr_v1.0_scaffold00058.86)
-2.68 -1.1 -3.83 -0.08 -0.32 - -2.09 -5.42 -2.62 -2.55 1.38 1.13 0.27 0.07 0.16 0.7 1.22 0.68 0.85 0.65 -0.24 0.03
AMTR_s00058p00185710 (evm_27.TU.AmTr_v1.0_scaffold00058.180)
0.22 -5.37 - -6.38 -0.41 - -1.26 -4.25 -0.94 -1.37 1.34 1.1 0.42 -0.07 0.24 0.11 1.14 0.52 0.64 0.51 0.73 0.23
AMTR_s00058p00198540 (evm_27.TU.AmTr_v1.0_scaffold00058.200)
-0.03 -0.99 -2.52 -5.77 -1.77 - -1.59 -2.82 -0.91 -1.2 1.22 0.62 0.28 0.27 -0.62 0.26 1.41 0.57 0.66 1.02 0.71 0.12
AMTR_s00059p00168200 (evm_27.TU.AmTr_v1.0_scaffold00059.161)
-1.16 0.53 -3.01 -2.12 -0.33 - -3.3 - -1.92 -1.93 1.48 1.47 0.42 0.05 -0.43 0.59 0.77 0.88 0.35 0.24 -0.3 0.41
AMTR_s00067p00092640 (evm_27.TU.AmTr_v1.0_scaffold00067.71)
-0.84 -0.0 0.12 0.41 -0.09 -5.1 -2.94 -3.87 -2.56 -2.63 1.4 0.76 0.22 -0.09 -0.43 -0.24 1.06 0.96 0.88 0.16 -0.89 -0.03
AMTR_s00078p00149090 (evm_27.TU.AmTr_v1.0_scaffold00078.125)
-3.16 -1.99 -0.96 -1.23 -0.97 -6.55 -4.14 -7.33 -3.66 -3.44 2.11 0.98 0.3 -0.44 -0.47 0.12 1.59 0.59 0.5 0.41 0.25 0.52
AMTR_s00078p00166420 (evm_27.TU.AmTr_v1.0_scaffold00078.156)
-0.98 -2.43 -0.19 0.2 -1.81 -1.92 -1.54 -3.95 -1.31 -1.36 1.14 1.15 -0.09 -0.02 -0.66 0.38 0.4 0.98 0.9 0.28 1.04 -0.33
AMTR_s00095p00048830 (evm_27.TU.AmTr_v1.0_scaffold00095.23)
-0.17 -1.43 -2.41 -0.54 0.32 -6.83 -2.64 -9.51 -1.86 -1.83 1.27 0.93 0.45 -0.26 -0.06 0.28 1.21 1.05 0.94 0.07 -0.31 0.07
AMTR_s00104p00115330 (evm_27.TU.AmTr_v1.0_scaffold00104.48)
-0.26 -0.1 - -0.66 -0.58 - -3.93 -9.22 -3.78 -3.39 1.27 1.07 0.62 0.55 0.03 0.95 0.79 0.64 0.79 0.05 0.16 0.08
AMTR_s00110p00152340 (evm_27.TU.AmTr_v1.0_scaffold00110.129)
-2.81 -4.64 -0.92 -0.3 -2.37 -3.53 -1.85 -9.18 -1.08 -1.05 1.29 0.96 0.52 0.33 -0.32 0.59 0.78 0.75 0.78 0.65 0.76 0.27
AMTR_s00110p00155630 (evm_27.TU.AmTr_v1.0_scaffold00110.131)
-3.89 0.12 -0.1 -1.07 -1.33 - -6.37 -9.11 -6.03 -6.35 1.8 1.34 0.78 0.29 -0.94 0.64 1.03 0.71 0.45 0.01 -0.23 0.09
AMTR_s00134p00078680 (evm_27.TU.AmTr_v1.0_scaffold00134.25)
- 1.18 -10.09 -0.27 -0.65 - -5.4 -10.31 -5.3 -4.64 1.21 0.59 0.33 0.05 0.13 0.0 1.16 0.9 0.7 0.48 0.79 0.19
AMTR_s00135p00095240 (evm_27.TU.AmTr_v1.0_scaffold00135.54)
-3.21 0.82 0.2 0.02 -0.69 -1.75 -1.64 -4.63 -1.05 -1.35 1.06 0.93 0.31 -0.58 -1.97 -0.35 1.48 0.84 0.52 -0.77 0.34 -0.01
AMTR_s00145p00081540 (evm_27.TU.AmTr_v1.0_scaffold00145.30)
-1.25 -1.68 -3.63 -4.91 0.22 -3.77 -1.88 -4.36 -1.89 -1.95 1.15 1.06 0.66 0.61 0.24 0.25 0.74 0.8 0.92 0.45 0.74 -0.1
AMTR_s00146p00092580 (evm_27.TU.AmTr_v1.0_scaffold00146.57)
-0.98 -6.16 -1.04 -2.34 -0.15 -5.12 0.02 -8.98 -0.44 -0.15 1.21 0.49 0.5 -0.12 0.6 0.3 0.66 0.92 0.3 0.71 -0.21 0.26
AMTR_s00155p00036470 (evm_27.TU.AmTr_v1.0_scaffold00155.17)
0.09 0.12 0.2 -4.71 -1.99 -3.89 -3.74 - -3.53 -3.71 1.67 0.86 -0.15 0.06 -0.47 0.56 1.28 0.69 0.32 0.22 0.56 0.05
AMTR_s00166p00076690 (evm_27.TU.AmTr_v1.0_scaffold00166.44)
0.08 -2.75 -0.83 -2.77 0.1 -4.16 -1.04 -2.73 -0.61 -0.78 1.07 0.7 0.14 0.06 0.64 0.34 0.97 0.43 0.34 0.55 0.26 0.23
AMTR_s00171p00064430 (evm_27.TU.AmTr_v1.0_scaffold00171.48)
-1.54 -7.61 -0.35 0.16 -0.78 -4.36 -3.11 -3.72 -2.74 -2.53 1.38 1.04 -0.05 -0.09 -0.3 0.59 1.46 1.06 0.5 -0.01 0.36 0.27
AMTR_s00210p00017530 (evm_27.TU.AmTr_v1.0_scaffold00210.3)
- 1.04 -1.17 -1.42 -2.22 -5.59 -3.46 - -2.36 -2.62 1.33 1.01 0.67 0.39 -0.41 0.58 0.8 0.59 0.6 0.29 0.8 0.03

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.