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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.29 | -1.81 | -0.27 | -0.63 | -0.73 | 0.25 | 1.88 | 1.2 | -0.67 | -0.32 | -3.33 | 0.79 | 1.03 | 0.32 | 1.1 | 1.08 | - | 1.61 | -0.59 | -0.46 | -0.19 | 0.15 | -1.38 | -0.72 | -0.55 | 0.58 | -1.88 | -2.31 | -1.27 | -1.76 | 0.45 | -0.25 | 0.62 | 0.57 | 0.14 | 0.13 | 0.72 | 0.63 | 0.41 | 0.4 | 0.55 | 0.34 | -3.56 | -3.17 | - | 0.61 | 0.98 | -0.61 | -0.07 | -2.31 | -1.26 | -0.2 | -3.04 | -2.63 | -0.51 | -1.72 | |
| -2.75 | - | - | - | - | - | - | - | -1.74 | 1.19 | - | - | - | - | - | - | - | - | 1.3 | 1.25 | 0.67 | 0.46 | - | - | -1.83 | 1.39 | -1.66 | -0.45 | 0.26 | -0.81 | 0.31 | 0.38 | 0.84 | 1.13 | 0.49 | 1.76 | 1.97 | 0.74 | 2.54 | 2.11 | 0.92 | -0.02 | - | - | - | 0.87 | 1.6 | 1.35 | 1.24 | - | - | - | - | -3.98 | - | - | |
| -1.19 | 0.83 | -0.27 | 0.41 | -0.45 | 0.32 | 1.09 | 0.5 | -0.4 | 0.11 | -1.32 | -0.25 | 0.18 | -0.56 | -0.13 | 0.07 | -7.36 | 1.8 | 0.72 | -1.34 | 0.75 | -0.17 | -0.36 | -2.66 | -2.39 | 0.75 | -2.08 | -1.95 | -3.01 | -2.5 | 0.16 | 0.3 | 0.18 | 0.55 | 0.31 | -0.12 | 0.29 | 0.27 | 0.74 | 0.57 | -0.08 | -0.06 | 0.64 | 0.79 | 0.19 | 0.78 | 0.53 | 0.3 | 0.37 | -1.05 | -2.05 | -1.77 | -1.17 | -1.04 | -1.41 | -0.96 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.