View as: (view zlog-transformed or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Showing raw values)
Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0.57 | 0.35 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.37 | 0.98 | 0.7 | 0.0 | 0.0 | 0.0 | 0.0 | 0.09 | 0.33 | 0.0 | 0.0 | 0.33 | 0.17 | 14.36 | 0.79 | 1.21 | 0.0 | 0.0 | 0.17 | 0.0 | 0.0 | 0.0 | 0.0 | 4.11 | 6.29 | 5.19 | 6.18 | 7.52 | 5.73 | 6.32 | 3.02 | 3.77 | 3.78 | 2.94 | 7.4 | 14.07 | 22.81 | 15.24 | 3.96 | 6.87 | 0.97 | 0.69 | 0.1 | 0.0 | 0.1 | 0.09 | 0.0 | 0.0 | 0.0 | |
3.83 | 1.45 | 0.63 | 0.49 | 0.43 | 0.12 | 0.0 | 5.59 | 1.21 | 0.27 | 0.0 | 0.07 | 0.25 | 0.0 | 0.03 | 0.0 | 0.0 | 0.33 | 0.14 | 2.49 | 12.85 | 1.33 | 4.53 | 1.03 | 3.64 | 2.54 | 3.27 | 1.89 | 1.05 | 1.95 | 2.25 | 1.78 | 2.0 | 2.56 | 2.75 | 3.87 | 4.19 | 1.95 | 3.28 | 2.44 | 1.91 | 2.8 | 12.83 | 13.9 | 6.47 | 5.07 | 3.1 | 1.47 | 1.67 | 0.0 | 0.0 | 0.0 | 0.0 | 0.02 | 0.0 | 0.0 | |
0.21 | 0.24 | 0.06 | 0.0 | 0.03 | 0.05 | 0.39 | 0.72 | 0.33 | 0.22 | 0.0 | 0.03 | 0.39 | 0.0 | 0.07 | 0.27 | 0.0 | 1.49 | 0.1 | 0.05 | 1.18 | 0.0 | 0.17 | 0.0 | 0.15 | 0.18 | 0.22 | 0.0 | 0.0 | 0.0 | 1.94 | 1.87 | 2.03 | 1.75 | 1.87 | 1.4 | 1.92 | 1.03 | 1.26 | 1.77 | 1.58 | 2.17 | 0.31 | 4.86 | 2.75 | 0.12 | 0.3 | 0.83 | 0.55 | 0.0 | 0.03 | 0.03 | 0.0 | 0.0 | 0.0 | 0.01 |
Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)