Heatmap: Cluster_301 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
-1.39 -0.35 -3.89 -2.53 - -2.86 -1.82 -1.11 -0.38 -5.37 -0.7 -2.28 -0.36 0.13 -2.25 -1.43 -0.25 0.48 2.9 -0.26 -5.88 -5.94 -6.16 -5.24 0.75 -0.14 -0.7 - -6.44 -4.14 -5.31 -8.3 -6.34 - -4.12 -6.41 -5.37 -6.62 -6.57 -6.71 -5.76 -6.81 -6.69 -0.35 3.43 3.67 1.71 -0.88 -1.21
-1.75 -0.05 -1.13 0.8 -0.07 -2.74 -0.87 -0.12 -4.74 -4.63 -4.12 -0.65 0.27 0.13 -0.04 -1.19 -6.04 -1.95 -0.96 0.76 -4.71 -4.93 -4.57 -4.73 3.34 -4.59 -5.17 -4.56 -5.68 -5.32 -4.67 -5.31 -5.73 -6.57 - -7.0 -7.06 -5.21 -4.76 -6.1 -4.55 -8.26 -5.04 1.33 3.26 3.62 -0.25 -4.36 -7.37
-0.21 2.99 0.07 - - - -1.42 -3.33 -2.51 - -3.07 - - -0.76 - - -3.09 -1.64 - -3.33 - - - - -0.42 - - - - - - - - - - - - - - -3.94 - - - 2.05 3.16 4.19 2.19 -1.09 -
-4.79 -2.14 -6.47 -5.95 -3.21 - - - -6.89 -8.28 -7.59 -1.63 -3.77 -5.0 -1.7 -1.33 - -6.85 - -4.06 - - -8.23 -8.04 - - -4.01 - - - - -6.73 - - - - - - - -6.45 - -4.35 -6.48 3.32 1.3 5.12 -4.29 - -
-5.78 -1.94 -1.49 -7.44 - -5.62 -5.29 -4.62 -6.18 -3.75 -1.96 0.84 -1.37 -1.06 1.45 2.39 -4.33 -0.79 1.25 2.1 -5.63 -4.19 -4.09 -5.86 -3.06 -3.82 -3.15 -4.18 -4.72 -5.31 - -6.21 - -4.89 - - - -4.78 - -3.54 -4.5 -1.78 -4.16 3.16 0.99 4.06 0.36 -4.68 -5.1
-5.19 0.04 -6.79 - - - -2.62 -4.26 -3.72 -7.74 -4.02 -3.33 -5.13 0.56 - - -5.3 -2.01 -1.43 -5.03 -5.59 -7.6 -5.53 -6.06 - -4.37 - -4.05 - - - -6.19 - - - -3.31 - - - -6.05 -4.41 - -5.41 2.62 2.46 5.01 -0.65 -2.92 -2.38
-1.65 1.95 - - - - - - - - -3.13 -0.67 -0.4 0.96 - - -1.34 -1.22 - - -4.63 - -3.7 - - - - - - -1.08 - -2.98 - - - - - - - - - - -2.84 -0.88 1.97 4.17 3.15 3.07 -
-7.87 -3.63 -8.54 -6.18 -5.02 -2.02 -5.88 -6.08 -5.27 -7.28 -5.43 -1.46 -3.1 -3.44 - - -4.04 -4.56 - -3.8 -9.84 - -8.62 -7.2 -2.84 -6.39 -6.19 - - - - -7.95 - - - - - -4.51 - - -9.69 - -8.71 1.49 1.94 5.33 -3.43 -1.66 -2.62
-4.16 0.58 1.88 - - -5.16 -0.39 -0.78 -3.39 -6.86 -0.54 -3.38 0.6 1.14 -1.48 -0.89 -3.16 -0.96 - -4.56 -4.95 -7.67 -6.64 -6.77 -4.43 -5.83 - - - -3.87 -5.54 - - - - - -4.6 - - -6.96 -9.55 -4.55 -6.02 1.05 3.82 4.23 -0.21 - -3.69
-5.13 0.94 -9.13 - - -4.4 -3.29 -2.7 -1.14 -5.17 -1.79 -0.48 -1.21 1.18 -0.71 0.19 -5.64 -0.39 -3.31 0.09 -5.29 -2.45 -4.84 -3.63 -3.22 -5.01 -3.77 -5.1 -5.4 -4.47 -4.28 -5.45 -5.6 -4.73 -5.27 -5.96 -5.16 -4.6 -4.26 -2.98 -4.81 -2.16 -2.73 -1.91 3.69 4.55 -0.41 -5.13 -8.14
1.27 0.93 1.44 -3.49 -4.92 -5.52 -0.84 -0.77 0.34 -2.52 -1.32 1.39 0.67 0.79 -2.32 -3.31 0.9 -0.37 2.08 -1.37 -3.05 -2.67 -2.73 -2.8 -2.87 -3.14 -2.25 -2.48 -2.97 -3.56 -3.23 -2.89 -3.46 -3.37 -4.34 -3.12 -3.78 -3.19 -4.08 -3.62 -3.96 -3.35 -3.37 0.38 1.65 3.37 1.33 1.37 1.52
2.91 1.03 0.03 -0.81 -4.52 -3.66 1.08 1.52 0.82 -0.77 -0.11 0.39 -0.59 -1.16 -1.13 -1.68 0.06 0.02 1.01 -0.17 -1.83 -1.63 -1.63 -1.47 -3.89 0.19 -0.15 -2.15 -2.35 -1.69 -2.25 -1.04 -2.11 -2.85 -2.27 -1.48 -1.73 -1.7 -2.11 -2.65 -1.91 -2.09 -1.72 0.18 0.8 2.84 0.2 0.32 0.38
1.31 0.03 -1.24 -4.88 -6.08 -7.95 0.1 0.12 -0.03 -1.73 -1.41 -0.49 0.08 -0.87 -1.51 -1.45 1.14 -0.82 0.79 -0.08 -2.52 -1.8 -3.49 -1.97 -0.37 -0.12 -0.31 -2.47 -3.18 -1.92 -2.37 -1.36 -2.37 -3.42 -2.45 -2.66 -2.49 -2.19 -2.48 -3.72 -2.32 -3.13 -2.28 -0.1 0.1 4.48 -0.78 -0.67 -0.17
-2.67 0.97 -6.0 - - - -4.39 -2.92 -2.03 -5.95 -5.04 -2.21 -1.91 -1.96 - - -0.86 -3.28 - -1.61 -3.97 -6.34 -4.72 -4.09 -2.3 - - -3.49 - - - -3.41 - - - -3.48 -3.37 - - -2.13 -2.39 -0.05 -0.93 2.0 1.41 5.13 -1.96 - -
-6.05 -1.3 -6.75 - - - - - -5.67 -9.09 -8.93 -7.78 -3.87 -2.36 - - - -1.83 - -12.63 -8.87 - - -7.86 - - - - - - - -6.55 - - - - - - - - - -8.57 -8.16 1.8 1.67 5.37 - - -
-1.01 0.36 -1.86 -3.22 -6.69 -4.99 1.13 1.23 -0.84 0.58 -0.68 -1.11 -1.06 -0.7 - - 0.97 -1.53 -3.12 -2.73 -2.63 -8.78 -4.37 -5.23 - - - -2.3 -3.19 -3.91 -3.63 -1.8 -1.64 -2.93 -2.6 -2.66 -2.18 -2.92 -3.75 -2.48 -1.86 -1.42 -0.65 1.92 3.15 3.98 0.42 0.51 -0.92
1.45 0.1 -0.4 -0.03 -0.04 -2.33 -1.58 -0.84 1.87 -1.51 -1.23 0.6 -3.32 1.16 0.1 0.11 -0.94 0.38 -0.01 0.82 -3.62 -0.59 -0.71 -0.44 -2.67 1.73 0.83 -3.86 -3.29 - -3.78 -1.51 -2.71 -3.45 - -2.85 -2.36 -2.67 - -5.39 -1.98 -3.59 -3.54 0.99 0.7 3.75 -3.33 -4.5 -3.25
0.15 0.35 -0.49 -0.98 -0.67 0.24 1.94 2.24 -0.4 -0.43 0.11 -0.61 1.27 0.73 -3.84 -2.97 1.42 -0.23 -2.45 0.36 -1.47 -3.46 -2.74 -3.3 -1.71 -1.55 -1.72 -1.47 -2.12 -1.74 -2.12 -0.28 -1.55 -2.95 -2.07 -1.35 -1.66 -1.9 -2.03 -1.79 -0.92 -0.61 -0.39 1.63 1.4 2.89 -0.33 -1.05 -1.48
-0.54 2.11 - -1.52 1.91 2.82 -2.4 - -0.93 -1.63 0.51 - 0.94 1.73 - - 0.08 0.48 - -6.12 - - - - - - - - - - - - - - - - - - - - - - - -0.76 - 4.47 - - -
-6.14 -1.97 -1.18 -2.87 -6.21 - 2.46 1.29 -2.84 -1.78 -3.85 -2.05 0.23 -0.02 -1.47 0.15 -4.96 -1.73 - 1.63 -5.37 -2.98 -3.3 -5.87 -1.76 0.35 1.99 - - - -4.52 -6.51 -4.55 - - - - - - -4.14 -7.0 -3.4 -5.27 -2.8 2.06 4.46 - - -
-8.18 -4.65 -7.92 -4.84 - - 0.08 0.29 -8.51 -2.09 -2.87 -6.14 -4.02 -0.16 -1.21 0.03 -3.09 -2.03 -0.95 -0.99 -12.48 -7.41 -10.73 -5.94 -2.61 -1.89 -1.78 - - - - - - - - - - - - -8.39 -8.97 -7.22 -9.51 2.04 2.18 4.95 1.03 -4.36 -5.6
0.45 1.69 0.26 - - -3.96 -0.37 -0.11 1.26 -1.79 -0.59 -3.03 1.02 0.92 - - 0.44 1.29 0.5 1.79 -4.9 -4.83 -3.73 -3.68 - -0.76 - -2.23 -1.77 - -3.62 -2.22 - -2.83 - -2.37 - - - - -4.51 -5.03 -4.62 1.32 1.07 3.9 0.56 0.23 0.16
-2.54 1.14 0.28 - -1.59 - - - 0.92 - -3.63 0.82 - - - - - -2.33 - -3.75 -2.94 -1.99 - -3.23 - - - - - - - 0.41 0.73 1.21 - - - - 1.5 -1.69 -0.53 - -0.46 - 3.48 4.29 - - -
-1.94 0.11 -4.54 - - - 1.31 0.6 -1.64 -5.84 -2.1 -1.86 0.44 1.67 - - -4.96 0.79 - -2.86 -4.31 -3.48 -3.78 -3.35 0.43 - -3.45 -3.26 - -4.01 -4.53 -5.17 - - -3.92 -2.67 -2.69 - -4.43 -5.83 -3.91 -5.61 -4.56 1.18 1.93 4.52 2.17 -3.25 -3.06
2.87 1.81 -0.2 -4.32 -2.59 -2.51 -3.27 -4.68 1.42 -3.68 -1.57 -0.05 -0.3 1.93 -0.26 -0.47 -1.36 0.42 0.86 -0.91 -3.71 -1.98 -4.01 -1.23 -0.65 -0.07 -0.09 -5.31 -3.16 -3.49 -3.49 -2.25 -3.12 -3.32 -3.04 -2.52 -3.3 -3.96 -2.41 -4.43 -2.81 -3.75 -3.12 2.02 1.23 3.37 -2.67 -2.44 -1.85
2.38 1.71 -0.52 - -2.14 - -3.58 -2.55 2.83 -4.79 -1.51 -0.57 -0.72 -0.94 -0.54 0.05 -3.11 -0.55 1.26 -1.26 -4.99 -4.31 -6.98 -2.56 -3.3 0.17 0.07 -5.49 - -5.51 -5.77 -5.82 -3.79 -4.08 -5.42 -5.48 - -4.3 - -5.62 -2.83 -2.86 -3.91 2.29 1.22 3.78 -0.9 - -
1.71 1.73 0.19 - -3.02 - -5.18 -4.17 2.13 -4.38 -0.51 -0.18 -1.77 -1.89 -0.82 -1.12 -2.0 0.13 2.15 -1.58 -5.49 -4.52 -7.69 -2.22 - 0.32 0.46 - - - -4.56 - -4.24 - - - -4.37 - - -5.75 -3.95 -3.06 -3.82 2.05 1.41 4.07 -1.15 - -
-5.54 -1.76 -5.74 - -6.93 -7.53 -3.08 -6.41 -3.8 -6.31 -4.06 -1.08 -1.99 -1.65 -0.66 -0.8 -4.32 -1.69 3.64 -1.49 -3.15 -4.77 -1.25 -3.6 -3.92 -2.98 -3.4 -2.43 -5.26 -4.64 -3.71 -2.62 - -4.28 -2.81 -3.39 -3.67 -3.56 -4.8 -3.94 -4.31 -2.21 -2.41 -0.93 2.62 4.57 - - -
-3.29 1.74 - - - 0.39 - - - - -0.79 1.28 - - - - - -5.6 - - - - - - - 2.01 1.83 - - - - - - - - - - - - - - - - 2.28 2.37 4.56 - - -
-6.35 -0.41 -8.98 -1.71 -4.1 2.67 -6.29 -4.26 -8.02 - -1.73 1.67 -5.98 -5.73 -4.95 - -5.92 -3.98 - -1.35 -8.0 - - -7.71 - 0.51 -0.24 - - - - -4.82 - - - - - - - -7.97 -3.64 -6.26 -6.35 1.71 1.15 4.88 -4.04 - -
-8.52 -2.3 2.37 - - -3.3 -3.39 -3.58 - -8.07 -3.28 -0.99 -4.95 -1.13 - - -1.77 -3.27 -1.76 -5.53 -8.19 -7.79 -7.35 - - - - - - - - - - - - - - - - - - -6.1 - 2.99 3.47 4.41 0.21 -4.0 -
-1.63 -0.65 -4.61 -6.32 - -3.11 -0.61 -0.68 -0.39 -5.52 -2.1 -2.07 -5.27 -0.23 - -2.09 -0.71 -0.29 -0.42 -2.52 -4.21 -6.41 -3.87 -5.47 - -2.59 -3.46 -4.04 - -3.15 -2.6 -6.18 -4.02 - - -4.25 -4.35 - - -6.02 -7.93 -6.04 -5.97 2.97 2.21 4.72 0.82 -1.92 -4.08
-0.31 0.4 -0.54 -3.26 -2.39 -2.23 0.62 0.76 -0.54 -2.07 -1.24 0.2 1.36 1.38 -2.65 -2.37 0.42 -0.26 -1.38 0.35 -0.07 -1.74 -0.26 -1.1 -0.53 -1.16 -1.26 -0.13 -0.21 -0.27 -0.6 -0.57 -0.23 -1.51 -0.22 0.11 -0.07 -0.39 -0.2 -1.15 -0.45 -0.41 0.1 1.83 0.91 2.85 -1.01 -2.3 -1.09
0.34 1.59 2.19 -1.82 -2.17 1.27 1.27 1.08 -0.85 0.39 0.43 -0.71 -0.85 -1.11 - - 2.27 -1.51 - -1.81 -3.35 -9.04 -3.3 -3.29 -3.82 - - -2.89 -4.06 -4.02 - -1.46 -4.96 -4.48 -2.8 -2.43 -4.09 -2.91 -3.1 -4.74 -3.5 -3.73 -2.43 1.48 1.57 3.79 -2.14 -1.5 -2.23
- -0.62 - - - -3.01 - -6.61 -2.56 -3.27 -3.71 - -4.73 - - - - -3.99 - - -7.46 - - - - - - - - - - -5.31 - - - - - - - - -6.87 - - 0.68 2.92 5.27 - - -
0.39 1.88 -1.23 - - - -2.97 -5.55 -3.87 -3.59 -1.43 - -3.67 -3.72 - - -4.16 -6.26 1.51 - -5.39 -2.49 0.45 -6.17 -0.05 - - - - -2.09 - - - - - -2.36 - - - -5.7 - - - -2.54 2.72 4.91 - - -
-10.78 -4.55 -10.83 -11.27 -9.75 -7.43 -11.44 - -6.72 -12.68 -10.24 1.76 -9.38 -6.02 0.65 0.96 - -2.48 -2.79 -0.55 - -9.07 - -9.1 -3.18 -4.0 -2.44 - -9.27 - - -7.89 - - -8.89 - - - - -7.23 -5.76 -5.94 -5.67 -7.26 3.68 4.8 - - -
-5.46 -1.91 -7.74 - - -6.59 1.43 1.05 -2.49 -3.42 -1.35 -4.21 0.84 1.8 -3.0 -2.98 -2.36 1.91 -2.87 -2.58 -4.51 -3.84 -4.63 -4.05 -1.11 -4.09 -5.29 -2.71 -6.77 -4.6 -4.9 -4.9 -4.57 - -4.97 -4.73 -5.6 -5.07 -4.5 -10.31 -10.42 -8.15 -7.3 1.87 1.3 4.21 2.86 -2.21 -3.94
-4.66 0.39 - -4.4 - - - -5.84 2.4 0.4 0.15 -1.35 -2.37 -2.34 - - -7.05 -3.45 0.81 -4.99 - -5.75 -7.82 -5.09 -2.44 - -3.79 - - - - -5.54 - - - - - - - - - - - 0.86 3.24 4.68 - - -
-6.16 -1.04 -0.64 - - -3.18 - - -6.62 -8.28 -4.67 -6.27 - - - - - -6.71 - -8.33 -7.61 -7.4 -5.18 - -0.83 - - - - - -3.74 -5.74 - - - - -3.71 - - - -6.43 - - -1.81 1.03 5.48 -4.29 - -
-3.08 -0.9 -6.71 -5.09 -7.13 - -1.95 -2.2 0.98 -4.99 -0.13 -3.26 -6.27 -1.83 - -3.72 -3.77 -3.86 1.92 -2.38 -5.8 -6.63 -5.68 -7.78 -3.61 -7.5 -7.4 -4.09 -6.64 -5.16 -7.49 -5.32 -5.51 - - -6.2 -4.89 -5.22 -6.39 -9.44 -7.77 -8.07 -7.16 0.77 1.33 4.84 1.29 1.78 0.13
-6.0 -3.16 -8.6 - - - -3.43 -4.32 -7.02 -5.02 -2.82 -4.24 -7.13 -4.3 - - -3.57 -5.88 2.53 -2.81 -9.77 -9.85 -9.62 -11.22 - - - - - - - - - - - - - - -7.35 -7.87 -10.71 -9.8 -9.71 3.13 0.97 4.4 2.28 2.14 0.39
-4.39 -0.58 -3.24 -4.46 - -4.46 -7.07 -7.06 -5.76 -4.58 -2.4 -4.71 - -2.98 - -2.71 0.38 -3.53 -0.0 -0.46 - -7.53 - -5.55 -1.04 -1.13 -1.74 - - - - - - - - - - - - - -7.71 - - 0.87 2.37 5.17 - - -
-4.48 -1.99 - - -5.16 - -5.42 -4.28 -3.29 - -7.2 -5.27 -5.48 -5.73 - - - -7.03 - -2.99 -5.74 -7.21 -7.89 -7.18 - -5.59 - -5.37 - - - -4.89 -4.22 -3.85 - - -4.25 - - -6.06 -6.25 -4.33 -4.95 1.73 3.45 5.03 -0.78 -1.24 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.