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Heatmap: Cluster_195 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
1.3 0.23 0.2 0.56 1.57 2.42 1.3 1.48 2.08 2.9 2.28 1.9 0.24 0.0 0.7 0.0 1.07 0.77 5.68 0.0 0.0 14.36 0.56 0.96 13.47 0.8 0.61 1.24 1.14 1.37 0.8 1.2
30.14 27.57 21.27 22.68 26.19 26.75 24.34 25.33 31.21 30.17 28.9 29.6 14.03 28.17 12.15 16.29 19.99 21.63 22.91 35.78 30.52 76.56 18.33 15.52 78.17 19.3 24.52 19.45 25.19 21.58 42.06 31.6
0.39 14.54 5.62 2.22 5.56 5.9 2.99 4.86 4.64 1.21 7.14 1.32 0.79 1.28 1.07 0.73 2.66 0.23 1.16 10.97 14.39 13.98 2.19 2.27 51.19 0.0 1.86 1.21 1.1 1.65 1.13 0.78
13.26 14.36 12.76 17.23 10.55 18.29 14.74 17.19 13.14 14.95 12.24 14.06 20.33 15.63 20.37 25.82 20.92 19.52 29.4 18.85 43.43 66.35 21.02 22.5 48.42 16.29 16.51 16.97 22.32 21.37 11.14 11.9
21.46 18.78 17.21 21.71 17.77 24.0 24.36 21.61 19.94 18.99 20.35 19.93 17.01 13.28 30.83 20.14 21.24 17.96 32.28 15.93 28.8 56.28 19.92 21.94 37.53 30.42 28.61 23.98 19.87 19.4 18.65 24.92
0.92 1.7 6.8 0.46 5.46 4.14 3.05 0.0 3.04 1.98 0.85 3.17 0.0 1.61 3.23 0.0 0.0 6.35 0.0 14.5 11.96 25.75 0.0 0.0 21.55 7.24 3.83 6.46 0.0 0.0 0.0 0.0
60.22 57.67 70.08 70.57 67.79 65.13 70.11 62.98 62.08 58.4 59.91 48.7 71.62 60.17 69.5 83.98 75.2 52.88 81.28 59.61 57.83 156.63 79.43 72.88 65.2 101.25 63.88 70.49 62.0 61.62 62.42 59.03
1.53 1.22 2.04 1.23 1.52 1.81 2.26 2.0 1.35 1.8 2.12 2.09 1.18 0.43 0.16 0.77 0.98 3.33 1.46 0.03 3.07 5.27 1.36 1.45 7.13 3.43 2.97 3.36 0.99 0.96 1.83 1.6
2.11 1.79 1.67 1.94 1.23 1.97 1.36 1.65 1.81 1.67 1.75 2.09 3.79 2.5 3.49 4.34 1.33 2.06 2.6 3.71 1.8 5.87 1.44 1.87 6.53 3.16 2.44 1.88 1.26 1.65 2.95 2.92
21.78 26.83 27.33 21.64 24.62 23.38 23.31 21.88 23.53 21.5 21.28 15.75 30.41 41.51 20.06 30.18 22.17 31.34 18.15 5.07 38.37 24.85 34.37 33.71 44.2 13.58 16.93 13.28 19.73 21.41 16.6 15.65
0.21 0.18 0.35 0.05 0.04 0.17 0.37 0.28 0.04 0.17 0.17 0.06 0.18 0.18 0.45 0.22 0.12 0.06 4.63 0.03 0.99 4.61 0.25 0.15 2.78 0.04 0.7 0.63 0.18 0.14 0.11 0.06
0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.03 0.0 0.22 0.06 0.0 0.0 0.36 0.0 0.15 0.08 0.6 0.19 0.21 0.22 0.39 0.2 0.55 0.0 0.03 0.03 0.03
3.54 2.92 3.19 2.83 5.29 4.84 3.46 4.21 3.08 2.79 3.07 3.18 1.59 3.54 6.62 1.45 1.61 3.1 2.44 4.28 3.7 15.7 1.58 1.84 20.59 4.79 7.3 5.35 1.98 1.76 1.26 1.43
4.91 4.74 6.73 5.26 7.64 7.6 5.59 7.01 6.08 4.78 4.91 4.84 9.75 6.61 11.39 7.55 5.04 7.48 9.74 7.69 1.8 5.57 9.61 10.06 9.23 2.66 3.48 4.08 4.81 6.98 4.17 3.08
0.82 0.4 0.55 1.33 1.87 1.13 1.24 0.71 0.57 0.29 0.83 0.39 0.36 0.54 0.42 0.6 0.63 1.53 0.79 2.42 2.87 13.41 0.67 0.42 9.4 4.81 5.7 5.67 0.65 0.81 0.23 0.09
10.03 10.95 8.81 10.64 9.19 12.56 7.97 10.45 8.56 9.25 8.83 8.62 10.23 13.79 17.58 9.86 7.65 3.58 13.87 10.63 13.15 13.06 9.26 9.04 29.15 8.71 12.21 11.18 7.53 6.99 7.74 7.75
0.29 0.33 0.34 0.32 0.19 0.23 0.13 0.27 0.25 0.62 0.1 0.11 0.54 0.67 0.51 0.77 0.13 0.11 2.94 0.2 0.09 0.95 0.04 0.06 1.18 0.29 0.43 0.33 0.07 0.07 0.12 0.17
0.76 1.55 1.34 1.4 1.38 1.05 0.86 1.57 0.98 1.18 0.78 0.66 0.91 1.29 1.3 1.11 0.81 1.42 1.35 1.2 0.82 6.0 1.37 1.11 1.33 1.15 2.1 2.14 0.58 0.51 0.6 0.59
0.41 0.36 0.58 0.55 0.73 0.39 1.24 0.54 1.14 1.07 0.97 0.7 0.13 0.42 0.4 0.31 0.74 0.03 0.75 0.01 0.79 3.99 0.54 0.67 2.48 0.95 1.52 0.94 0.8 0.69 0.98 1.2
7.74 7.57 8.3 8.73 9.25 11.13 13.15 14.59 16.69 15.3 12.35 9.82 9.34 7.4 20.01 8.41 5.76 5.54 9.86 6.65 21.48 20.92 8.14 9.07 28.3 12.57 11.09 13.66 7.81 9.32 5.37 7.08
6.01 7.23 8.27 10.76 14.93 15.12 19.79 17.89 15.35 12.86 8.63 7.51 10.15 6.88 34.34 9.66 7.23 6.24 10.88 7.89 34.88 28.7 10.59 11.42 24.65 10.05 13.54 16.59 8.64 10.24 4.33 4.35
5.24 4.51 5.04 4.09 2.96 3.93 4.79 4.82 4.61 5.65 5.15 4.71 2.73 3.13 3.28 3.45 2.69 2.23 4.87 0.81 13.04 9.81 2.92 3.17 14.82 4.97 5.86 6.23 2.68 3.17 2.49 2.7
0.05 0.0 0.02 0.06 0.02 0.02 0.05 0.02 0.04 0.07 0.14 0.0 0.06 0.0 0.02 0.03 0.02 0.16 0.0 0.13 0.15 0.32 0.0 0.02 0.28 0.1 0.26 0.12 0.02 0.0 0.05 0.0
0.03 0.0 0.0 0.0 0.0 0.0 0.1 0.05 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.16 0.0 0.0 0.5 0.0 0.0 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0
1.75 1.49 2.32 1.82 0.91 2.42 1.9 3.43 2.13 1.99 1.35 1.69 0.98 0.88 1.28 1.15 0.64 0.0 0.73 3.26 6.66 10.41 0.65 1.14 5.72 1.81 1.09 0.64 0.31 0.42 0.28 0.18
0.57 0.88 0.47 0.67 1.18 0.91 1.07 1.16 0.86 0.88 0.48 0.55 0.37 0.17 1.14 0.75 1.08 0.19 1.3 1.31 0.33 3.42 1.36 0.83 3.69 1.38 1.57 2.05 0.99 0.82 0.8 0.6
8.58 9.51 10.49 11.05 14.9 13.71 11.02 10.39 11.95 11.37 11.63 8.52 4.91 5.07 9.0 12.02 12.93 9.45 17.46 7.45 19.39 17.72 4.62 6.36 32.75 12.62 12.34 11.44 9.59 12.47 11.42 10.17
16.73 11.29 20.9 17.51 22.34 18.56 20.56 22.57 10.33 18.82 20.69 15.86 9.32 4.51 3.55 13.74 6.87 13.27 12.2 17.42 38.7 35.34 7.98 12.74 50.19 13.26 7.5 9.96 6.49 7.64 5.2 6.66
9.24 8.05 8.95 8.29 9.64 10.6 6.24 6.32 5.2 7.52 6.0 6.65 8.92 13.23 19.62 11.99 6.37 6.34 7.84 12.29 13.11 32.13 5.82 7.19 20.92 2.93 3.57 5.8 6.64 6.66 4.16 4.1
0.1 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.09 0.04 0.1 0.04 0.0 0.07 0.0 0.04 0.06 0.11 0.0 0.19 0.34 0.0 0.0 0.0 0.0 0.09 0.0 0.04 0.08 0.04 0.04
1.04 2.38 1.25 0.82 1.12 0.85 0.37 0.84 0.67 1.78 1.63 1.47 3.84 0.16 0.55 3.35 3.39 5.35 3.58 2.2 9.49 14.75 2.9 4.08 9.37 0.52 0.0 0.0 3.25 3.37 2.96 1.82
4.83 4.69 2.76 6.58 6.17 9.3 9.53 8.21 8.62 9.52 6.08 7.45 3.83 4.31 6.43 4.87 5.41 7.73 6.87 7.49 32.39 55.29 7.55 8.71 52.75 11.1 16.65 10.31 6.0 6.87 7.13 7.33
1.89 1.4 0.69 2.15 0.92 1.74 1.3 2.34 1.72 1.4 1.87 2.02 0.94 0.59 0.83 1.35 1.06 0.55 1.44 4.36 2.05 22.28 1.42 1.07 17.39 0.69 0.43 0.62 0.66 0.73 1.45 1.39
3.77 4.26 3.59 8.41 6.92 4.48 6.06 6.95 4.98 7.26 5.03 5.25 4.79 3.32 4.51 4.18 5.83 1.01 4.99 2.28 4.63 16.33 5.56 2.41 10.14 4.47 9.3 6.94 4.83 6.85 6.7 5.49
0.32 1.46 0.1 1.21 1.07 0.82 1.33 0.0 1.98 0.0 0.3 0.0 0.26 0.08 0.07 0.0 0.87 0.0 1.07 0.71 0.14 2.84 0.0 0.24 7.55 0.0 2.04 0.0 0.0 0.0 0.0 0.0
13.8 17.35 17.15 17.41 15.6 17.91 18.4 18.13 14.7 20.14 15.18 14.16 20.78 21.96 27.69 24.12 15.2 11.47 24.64 26.75 30.26 50.4 19.33 23.33 59.04 16.68 17.25 17.85 13.4 16.02 8.96 10.67
0.11 0.25 0.09 0.12 0.27 0.14 0.2 0.16 0.13 0.16 0.28 0.08 0.05 0.23 0.27 0.05 0.04 0.06 0.08 0.42 0.41 0.58 0.04 0.02 0.34 0.33 0.22 0.18 0.0 0.07 0.03 0.01
0.0 0.0 0.0 0.0 0.0 0.5 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.44 0.0 0.0 3.05 0.0 0.0 0.0 0.0 0.1 0.0 0.0
17.02 16.35 15.05 17.97 19.54 22.3 24.66 22.79 28.56 26.2 19.92 21.97 10.29 7.28 23.79 12.89 13.06 9.08 19.34 22.61 46.69 41.02 16.71 20.22 57.18 12.61 14.14 14.38 17.01 16.91 14.92 19.78
1.81 3.15 1.49 3.17 2.09 2.46 2.42 1.94 2.44 1.42 1.82 1.62 1.46 0.82 5.11 4.06 2.24 5.1 4.42 4.48 5.6 14.27 1.57 0.74 5.63 2.4 1.39 1.14 1.87 3.49 1.12 0.65
9.36 6.8 9.27 6.73 11.62 9.7 8.54 14.47 7.67 10.48 8.6 9.62 9.1 3.38 4.13 7.75 5.0 2.3 5.59 7.31 11.09 10.56 5.18 6.48 7.05 10.93 9.49 8.36 5.17 3.04 6.05 9.04
11.31 14.4 18.18 15.04 19.89 23.23 16.93 17.16 20.6 16.11 10.67 12.92 16.42 10.73 27.8 13.02 15.47 19.53 18.29 9.39 34.11 57.79 13.84 14.83 52.64 16.0 26.42 31.07 11.25 15.95 11.73 12.9
8.5 11.81 8.76 11.24 13.61 14.36 13.59 17.02 11.31 9.43 10.18 5.68 9.12 4.53 12.47 10.01 9.14 8.23 14.53 27.05 22.76 72.0 11.73 13.37 56.76 19.42 24.23 19.64 10.23 11.57 3.69 5.16
25.2 24.78 26.96 28.67 29.34 26.55 24.68 22.31 22.3 23.31 22.79 22.05 40.43 42.61 34.86 37.82 22.84 21.67 30.15 33.6 34.65 29.74 31.8 37.03 56.94 17.14 18.52 23.1 26.06 30.2 27.79 29.0
3.61 2.13 2.26 4.09 3.43 13.31 7.76 8.2 9.75 7.61 3.92 3.63 1.5 1.11 6.23 2.17 4.9 3.15 4.91 4.79 9.15 37.78 3.37 2.58 23.0 3.67 11.61 8.65 5.17 6.13 5.12 3.98
10.02 12.92 11.19 12.82 15.6 13.95 12.21 13.49 12.73 14.54 12.67 10.61 14.38 15.81 21.75 13.43 7.27 4.45 13.17 12.74 27.66 22.24 10.69 10.81 27.15 23.91 15.93 14.38 8.15 8.38 4.66 5.46
4.45 3.78 4.71 4.18 8.02 9.53 9.72 12.91 8.93 8.89 8.12 5.5 1.99 1.07 7.89 2.3 4.38 4.11 3.23 7.6 17.48 18.32 3.57 2.83 40.71 4.28 11.2 8.2 4.83 5.09 6.32 5.5
25.78 23.48 27.11 32.47 38.71 41.34 43.4 42.6 41.48 36.51 31.5 30.55 55.27 28.2 57.39 31.81 19.29 14.5 23.06 16.28 46.15 30.91 34.0 35.01 45.74 30.7 37.47 35.56 23.48 24.29 14.81 14.86

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)