Heatmap: Cluster_174 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.21 0.39 0.45 0.4 0.51 0.3 0.25 0.26 0.14 0.08 -0.02 -0.14 0.83 0.08 -0.7 1.11 -0.31 -0.81 0.1 -2.23 -1.39 -3.03 0.22 0.18 -0.66 0.39 0.21 0.43 -0.4 -0.19 -1.12 -1.24
-0.35 -0.37 -0.05 0.14 0.2 -0.21 0.71 0.65 0.34 0.51 0.27 -0.11 1.09 0.47 0.18 0.7 -0.22 -1.01 0.02 -1.59 -3.14 -3.35 -0.42 -0.37 -2.93 0.31 -0.0 -0.37 0.05 -0.01 0.35 0.24
0.02 0.24 0.28 0.3 0.09 0.03 0.39 0.5 0.5 0.62 0.51 0.4 0.54 0.49 -0.07 0.4 -0.5 -1.05 -0.14 -2.96 -2.79 -1.4 -0.02 -0.13 -2.23 0.47 0.33 0.35 -0.36 -0.27 -0.38 -0.84
-0.81 -0.23 0.39 0.48 0.24 0.16 1.73 1.13 1.1 1.14 0.75 0.46 0.9 0.2 0.96 0.49 -1.55 -2.12 -0.61 -6.25 -3.63 -4.0 -3.71 -2.51 -3.56 0.56 -0.64 -0.6 -1.52 -1.23 -0.95 -1.02
0.38 0.44 0.43 0.32 0.55 0.53 0.25 0.36 0.32 0.4 0.27 0.13 0.71 0.16 0.45 -0.03 -0.22 -0.81 -0.12 -3.16 -2.61 -0.4 -0.76 -1.34 -1.52 -0.07 0.48 0.64 -0.5 -0.43 -0.52 -0.67
-0.09 0.0 0.11 0.14 0.17 0.1 0.1 0.42 0.36 0.51 0.45 0.23 0.37 0.61 0.8 0.34 -0.47 -0.63 -0.09 -1.15 -1.68 -1.02 -0.22 -0.06 -1.01 0.31 -0.29 -0.36 -0.35 -0.32 -0.21 0.03
-0.73 -0.53 0.02 -0.4 -1.26 0.0 -0.39 0.06 -0.28 0.16 0.22 0.08 2.16 -1.2 1.83 2.04 -1.49 -0.94 -0.26 -2.75 -4.3 - -0.86 -0.46 -3.16 0.26 -0.47 0.08 -0.76 -1.03 -0.55 -0.06
-0.03 0.08 0.15 0.26 0.2 -0.03 0.69 0.58 0.37 0.44 0.5 0.23 0.91 0.35 -0.07 0.53 -0.16 -0.6 -0.02 -3.05 -2.23 -1.42 -0.36 -0.21 -1.5 -0.32 -0.88 -1.27 0.14 0.13 0.31 0.25
-0.06 0.17 0.45 0.29 0.19 0.21 0.62 0.76 0.63 0.68 0.42 0.16 0.51 -0.05 -0.86 0.52 -0.44 -0.91 -0.1 -3.43 -0.19 -5.45 -0.0 -0.25 -1.89 -0.04 -0.56 -0.51 -0.07 -0.31 0.54 -0.07
-0.12 -0.03 0.21 0.31 0.29 0.1 0.65 0.52 0.64 0.81 0.58 0.4 1.16 0.52 0.7 0.69 -0.81 -1.07 -1.01 -6.06 -6.34 -8.06 -0.09 -0.04 -3.42 0.34 -0.18 -0.31 -0.86 -0.75 -0.32 -0.16
0.17 0.09 0.1 0.26 0.24 0.1 0.1 0.19 0.34 0.33 0.36 0.25 0.28 0.44 0.52 0.1 -0.35 -0.76 -0.12 -1.54 -1.22 -1.61 0.15 0.35 -0.64 0.31 -0.0 0.01 -0.45 -0.31 -0.23 -0.09
-0.87 -1.35 -0.61 0.09 0.38 0.22 0.44 0.86 0.34 0.57 0.33 -0.16 -0.11 0.74 -0.32 -0.65 -0.51 -1.61 0.65 -0.99 -0.88 -2.24 -0.46 -0.46 0.57 0.58 0.79 0.49 -0.71 -0.75 -0.09 0.26
0.28 -0.1 -0.12 -0.2 -0.19 -0.31 -0.24 0.05 0.19 0.49 0.59 0.51 1.56 0.86 0.69 0.54 -1.11 -1.38 -0.54 -2.1 -1.03 -0.83 -0.75 -0.54 -0.15 0.85 0.05 -0.08 -0.82 -0.86 -0.84 -0.47
-0.06 0.32 0.4 0.37 0.28 0.2 0.55 0.47 0.48 0.69 0.52 0.46 0.67 0.5 0.26 0.86 -0.52 -1.19 -0.42 -2.83 -3.29 -3.76 -1.08 -1.09 -1.08 0.14 0.27 0.27 -0.3 -0.2 -0.64 -0.59
-0.76 -0.82 0.2 0.59 0.29 0.08 1.35 1.54 1.28 1.34 0.75 0.37 1.32 -0.38 -1.41 0.73 -1.13 -1.95 -2.13 -4.56 -4.09 -4.71 -1.02 -1.02 -1.04 0.82 -0.74 -1.1 -0.81 -0.83 -1.32 -1.72
-0.29 0.53 0.34 0.48 0.23 0.34 0.21 -0.02 0.23 -0.17 -0.39 -0.32 1.43 1.01 1.52 1.17 -1.73 -0.5 -1.16 -0.43 -2.15 -0.91 -0.02 0.88 -0.83 -1.41 -2.11 -2.0 -1.06 -0.5 -1.94 -1.26
0.0 0.06 0.17 0.22 0.31 0.22 0.18 0.39 0.29 0.31 0.2 0.12 0.48 0.64 0.62 0.6 -0.67 -0.76 0.02 -0.85 -1.42 -1.11 -0.11 0.02 -1.34 0.11 0.04 0.06 -0.46 -0.45 -0.34 -0.39
-0.26 0.04 0.25 0.12 0.08 0.05 0.36 0.43 0.42 0.51 0.34 0.23 0.32 0.43 0.12 0.41 -0.83 -1.1 -0.72 -3.24 -2.06 -1.65 0.12 0.19 -1.83 0.78 0.68 0.53 -0.57 -0.6 -0.09 0.1
-0.01 0.06 0.19 0.31 0.25 0.18 0.35 0.61 0.49 0.51 0.51 0.32 0.18 0.23 -0.06 0.3 -0.57 -1.04 -0.11 -7.13 -1.76 -0.53 -0.18 -0.07 -0.03 0.49 0.18 0.3 -0.44 -0.3 -0.69 -0.68
-0.06 0.07 0.26 0.25 0.24 0.35 0.29 0.39 0.4 0.46 0.39 0.13 0.21 0.06 0.46 0.19 -0.87 -0.98 -0.07 -1.6 -0.56 -2.22 -0.23 -0.06 -0.35 0.12 0.38 0.21 -0.62 -0.59 0.06 0.11
0.11 -0.14 0.14 0.08 0.25 0.27 0.24 0.26 0.22 0.33 0.16 0.0 1.43 0.21 0.88 1.02 -0.7 -0.91 -0.06 -3.3 -2.77 -2.79 0.39 0.66 -2.42 -0.36 -0.44 -0.22 -0.25 -0.03 -0.86 -0.95
0.22 0.16 0.26 0.56 0.35 0.22 0.25 0.46 0.36 0.41 0.21 0.24 0.65 1.24 0.83 0.32 -0.52 -2.13 -0.76 -7.55 -4.11 -5.04 -0.14 -0.05 -3.17 0.36 0.16 0.2 -0.47 -0.51 -0.43 -0.27
0.03 -0.63 -0.53 -0.4 0.02 -0.33 -0.59 0.16 -0.1 0.63 0.03 0.16 2.12 1.71 1.05 1.28 -2.63 -0.59 -1.03 -5.75 -0.55 -5.56 -2.46 -1.83 0.64 0.38 -0.17 0.22 -2.29 -1.8 -2.05 -1.48
-0.37 -0.03 0.23 0.41 0.33 0.33 0.34 0.73 0.73 0.71 0.51 0.39 -0.21 0.12 0.14 -0.2 -0.43 -0.92 -0.35 -2.75 -2.97 -4.79 -0.14 -0.27 0.34 0.42 0.48 0.27 -0.3 -0.28 -0.81 -0.27
-0.09 0.17 0.18 0.02 0.28 0.04 -0.15 0.04 0.69 0.72 0.52 0.21 0.68 0.73 0.84 0.76 -0.97 -0.65 0.3 -4.68 -2.07 -3.35 -0.35 -0.45 -1.1 0.48 0.26 -0.05 -0.73 -0.83 -0.55 -0.18
-1.81 -2.91 0.55 1.15 0.45 0.44 2.05 1.96 0.99 1.42 1.78 0.26 - - -0.97 -2.63 -2.79 -2.62 -1.79 - - - -1.06 - - 1.98 -1.54 0.47 -1.82 -2.77 - -
-0.09 -0.1 0.06 0.12 0.14 0.03 0.37 0.41 0.41 0.43 0.45 0.02 0.86 0.78 0.59 0.21 -0.28 -0.74 0.37 -9.35 -5.64 - 0.19 0.59 -3.62 0.22 -0.12 0.03 -0.33 -0.14 -0.24 -0.17
-0.37 -0.6 -0.4 -0.59 -0.42 -0.59 -0.7 0.2 0.37 0.52 0.28 -0.12 2.08 0.77 1.48 2.07 -3.2 -3.21 -1.04 -7.96 -6.12 -2.25 -0.41 0.83 -2.07 0.75 -0.27 -0.68 -1.47 -1.09 -2.1 -1.71
-0.28 -0.13 0.69 0.45 0.4 0.73 0.22 -0.01 0.15 -0.11 -0.06 -0.33 1.34 0.99 0.94 0.57 -1.98 -2.16 -0.97 - -2.81 -5.89 -1.15 -0.63 -0.26 0.16 1.31 1.35 -1.54 -1.29 -1.97 -2.44
0.62 0.51 0.07 -0.01 0.19 0.13 -0.23 -0.15 0.15 0.23 0.04 0.02 1.52 0.24 0.24 1.18 -0.43 -0.26 0.1 -1.45 -3.4 -2.07 0.45 0.75 -3.92 -0.77 -0.46 -0.66 -0.62 -0.34 -0.68 -0.5
0.18 0.18 0.03 0.17 0.3 0.18 0.17 0.18 0.21 0.35 0.14 -0.01 1.02 0.51 0.42 0.74 -0.92 -0.71 -0.02 -1.73 -1.89 -2.88 -0.0 0.05 -1.41 0.47 0.4 0.35 -0.67 -0.69 -0.47 -0.34
0.16 0.3 0.65 0.54 0.9 0.95 0.56 0.81 0.53 0.47 0.41 -0.13 0.2 0.01 -0.33 0.02 -1.06 -1.73 -0.96 -2.02 -6.98 -2.89 0.29 0.13 -0.92 -0.09 0.82 0.71 -1.02 -1.1 -1.63 -1.32
0.62 0.45 0.44 0.44 0.39 0.3 -0.57 -0.31 0.34 0.19 0.18 0.08 0.68 0.7 0.33 0.66 -0.14 -0.82 -0.17 -6.35 -2.86 -2.64 -0.59 -0.53 -1.49 0.19 0.77 0.82 -0.71 -0.34 -0.68 -0.61
-0.02 0.29 0.23 0.48 0.4 0.15 0.33 0.63 0.46 0.38 0.49 0.12 0.96 0.69 0.7 0.69 -1.1 -1.89 -0.64 -3.58 -2.61 -5.1 -0.76 -0.85 -1.51 0.31 0.61 0.59 -0.9 -0.83 -0.47 -0.36
-0.0 0.35 0.39 0.61 0.55 0.43 0.37 0.21 0.3 0.19 0.12 -0.05 0.63 1.0 0.34 0.74 -0.91 -1.62 -0.74 -2.38 -2.82 -2.68 -0.77 -1.3 -1.07 0.04 1.01 0.99 -0.82 -0.57 -1.08 -0.87
-0.13 -0.05 0.26 0.36 0.52 0.47 0.27 0.26 0.13 0.04 -0.01 -0.3 0.54 0.43 -0.64 0.84 -0.39 -0.55 0.17 -3.15 -1.09 -4.2 0.18 0.37 -0.72 0.54 0.34 0.52 -0.41 -0.29 -0.63 -0.64
-0.02 -0.44 -0.48 0.01 0.05 -0.17 0.07 0.48 0.6 0.65 0.6 0.49 0.98 1.03 0.94 0.48 -0.67 -1.08 -0.28 -3.57 -3.44 -6.45 -0.58 -0.46 -2.07 0.6 0.25 0.21 -0.37 -0.27 -0.27 -0.3
-0.39 0.04 0.24 0.46 0.15 0.33 0.37 0.34 0.55 0.72 0.51 0.16 1.01 0.87 0.59 0.61 -0.47 -0.46 -0.41 - - - 0.41 0.34 -4.08 0.52 -0.29 -0.33 -0.93 -0.72 -0.9 -0.67
0.2 0.15 0.27 0.45 0.47 0.36 0.79 0.74 0.47 0.58 0.31 0.16 0.65 0.46 -1.18 0.9 -1.11 -1.02 -0.71 -6.96 -5.01 -7.67 0.01 0.07 -2.39 -0.18 0.38 0.3 -0.66 -0.63 0.29 -0.26
-0.17 0.13 0.02 0.18 0.22 0.17 -0.1 0.14 0.14 0.69 0.57 0.4 1.73 0.69 1.23 1.46 -1.84 -1.78 -1.7 -4.28 -1.43 -4.08 -0.3 0.0 -0.17 -0.19 -0.36 -0.01 -1.47 -1.38 -1.98 -1.7
-0.21 -0.08 0.19 0.24 -0.11 0.1 0.21 0.42 0.59 0.92 0.61 0.32 1.02 0.65 -0.11 0.45 -0.48 -0.6 -0.2 -3.41 -7.31 -1.02 0.23 0.41 -2.84 0.22 -0.16 -0.65 -0.05 0.06 -0.91 -0.73
0.27 0.43 0.38 0.33 0.68 0.69 0.24 0.39 0.45 0.56 0.39 0.07 0.2 0.23 -0.0 0.47 -1.43 -1.67 -0.52 -1.66 -1.38 -2.41 -0.83 -1.32 -0.81 0.42 0.86 0.98 -0.72 -0.6 -1.02 -0.79
0.16 -0.11 -0.71 -0.12 0.35 0.33 -0.24 0.13 -0.19 -0.13 0.04 -0.07 0.6 0.9 1.1 0.83 -0.18 0.04 0.87 -1.5 -2.13 -1.54 0.42 0.63 -2.39 -1.78 -1.58 -1.33 0.11 -0.12 -0.01 0.16
0.22 0.09 -0.04 0.18 0.11 0.34 -0.12 -0.1 0.18 0.22 0.14 0.22 1.13 0.66 1.07 0.9 -0.63 -0.49 0.45 -0.76 -2.46 -0.91 0.51 0.8 -2.91 -1.27 -1.74 -1.62 -0.52 -0.43 -0.71 -0.4
-0.08 -0.23 0.01 0.22 0.5 0.33 -0.18 -0.32 -0.42 -0.07 0.1 -0.16 1.83 0.45 1.59 2.02 -1.77 -1.0 -1.17 -7.87 -6.63 - 0.66 1.02 -5.28 -1.54 -1.74 -1.17 -0.96 -0.19 -1.78 -1.54
-0.38 -0.49 -0.31 0.06 0.14 0.31 0.57 0.73 0.64 0.61 0.33 -0.09 0.53 0.86 0.67 0.52 -0.76 -0.94 -0.1 -2.59 -2.34 -2.58 -0.24 -0.18 -1.57 -0.06 0.6 0.56 -0.43 -0.24 -0.53 -0.44
-2.94 -0.44 0.34 0.19 -0.6 -0.9 2.49 1.66 0.82 1.4 0.75 0.34 0.88 0.01 -0.91 -1.7 -2.49 -1.96 -0.65 -0.28 -1.59 -2.0 -2.17 -2.13 -3.45 0.29 -1.24 -1.94 -1.12 -1.06 -0.02 -0.21
0.32 0.33 0.1 0.49 -0.28 -0.15 -0.19 -0.04 0.55 0.75 1.02 0.59 2.1 -0.34 1.84 2.18 -4.47 -3.97 -1.9 - - - -1.89 -0.19 -4.48 -0.54 -1.86 -1.83 -2.58 -1.8 -2.64 -3.26
0.4 0.53 0.22 0.35 0.36 0.43 0.45 0.22 0.13 -0.02 0.16 0.22 1.48 1.12 0.95 1.12 -0.79 -1.57 -0.27 -8.13 -6.99 -6.77 -0.27 1.12 -1.48 -0.5 -1.58 -1.6 -0.89 -0.79 -1.84 -1.69
-0.64 -0.18 0.68 -0.35 -0.22 0.72 -0.24 -0.05 0.79 0.16 -1.5 0.07 1.38 0.94 1.09 0.58 -1.75 -1.51 0.56 -3.45 -2.66 - -1.51 -1.54 -0.78 -0.07 1.65 0.33 -0.44 -0.3 -1.04 -1.51
-0.24 -0.12 -0.11 0.06 0.23 -0.51 0.33 0.27 0.55 0.59 0.53 0.47 0.96 0.63 0.95 0.7 -0.64 -1.52 0.04 -2.64 - -5.23 0.14 0.44 -2.31 0.79 -0.28 -0.4 -0.44 -0.34 -0.69 -0.41
0.06 0.01 0.16 0.33 0.31 0.34 0.35 0.67 0.42 0.44 0.43 0.27 0.07 0.34 0.19 0.16 -0.93 -1.29 0.01 -0.41 -0.99 -1.88 -0.53 -0.4 -0.69 0.49 0.1 -0.0 -0.66 -0.65 -0.03 0.18
-0.08 0.33 0.41 0.39 0.38 0.32 0.43 0.41 0.13 0.23 0.05 0.08 0.04 0.24 -0.11 0.13 -0.42 -0.53 0.07 -1.66 -1.05 -4.76 -0.05 -0.22 -0.47 0.15 0.57 0.57 -0.32 -0.34 -0.14 -0.19
-0.48 -0.15 0.16 0.06 0.23 0.11 0.49 0.6 0.64 0.74 0.65 0.19 0.71 0.19 0.53 0.29 -0.05 -0.15 -0.54 -2.33 -2.31 -1.41 -0.07 -0.2 -2.61 -0.09 -0.35 -0.32 -0.15 -0.06 -0.07 0.04
-1.35 -0.8 -0.14 0.31 0.19 0.14 0.45 0.77 0.42 0.43 0.08 -0.35 0.41 0.6 -0.54 0.37 -0.61 -1.04 -0.21 -0.68 -0.15 -3.27 0.04 0.05 0.81 0.7 -0.19 -0.36 -0.45 -0.58 -0.16 0.26
-0.54 -0.42 -0.04 0.06 -0.08 -0.05 0.17 0.48 0.36 0.6 0.38 0.17 1.84 0.93 0.33 0.54 -0.89 -1.37 -0.66 -2.26 -2.04 -3.89 -0.33 -0.17 -0.55 0.72 0.2 0.28 -0.99 -0.86 -0.82 -0.66
0.07 -0.2 -0.09 0.03 0.49 0.1 0.13 0.21 0.14 0.12 -0.07 -0.26 1.08 0.38 -0.13 0.86 -0.79 -0.99 -0.05 -3.17 -5.18 -4.29 0.12 0.48 -0.29 0.46 0.79 0.8 -0.55 -0.36 -0.75 -0.29
0.3 0.25 0.2 0.36 0.56 0.63 -0.37 -0.43 -0.1 -0.26 -0.22 -0.62 0.34 0.93 0.35 0.98 0.13 -0.73 0.55 -5.17 -3.89 -3.19 0.07 0.03 -1.91 0.12 0.79 0.98 -0.49 -0.1 -1.48 -1.2
-0.1 0.05 0.18 0.59 0.84 0.64 0.5 0.34 0.04 0.09 -0.11 -0.3 0.9 0.09 -0.91 1.02 -0.21 -1.87 0.4 -4.99 -2.77 -5.45 -0.08 -0.5 -1.91 0.79 0.46 0.61 -0.22 -0.08 -1.01 -0.86
0.52 0.17 -0.25 0.12 -0.15 -0.15 -0.17 -0.41 0.02 0.03 0.21 -0.19 1.31 0.94 1.3 1.56 -0.43 0.05 -2.03 -4.32 -5.01 -2.78 0.49 1.41 -0.68 -0.91 -1.23 -1.15 -0.76 -0.71 -1.53 -1.8
0.13 0.13 0.12 0.3 0.35 0.08 0.26 0.36 0.52 0.87 0.53 0.45 0.44 0.18 0.38 0.48 -0.31 -0.71 -0.46 -0.92 -4.81 -0.87 0.13 0.38 -2.48 -0.37 -0.71 -0.37 -0.25 -0.15 -0.36 -0.16
-1.8 -1.05 0.34 0.89 0.65 0.43 1.33 1.36 0.85 0.53 -0.02 -0.68 0.77 0.36 -1.16 0.53 -0.67 -0.82 0.04 -2.82 -1.39 -2.16 -0.14 -0.36 -2.61 0.74 -0.69 -0.89 -0.7 -0.76 -0.42 -0.34
-0.05 0.11 0.21 0.21 0.35 0.22 0.35 0.66 0.44 0.54 0.42 0.22 0.19 -0.26 0.52 0.08 -0.69 -0.98 0.02 -4.87 -2.27 -1.02 -0.18 -0.02 -0.43 0.58 0.48 0.69 -0.31 -0.31 -1.26 -0.9
0.0 0.14 0.28 0.31 0.27 0.18 0.55 0.29 0.47 0.58 0.32 0.14 0.7 0.91 -0.6 1.01 -0.87 -1.05 0.32 -3.75 -3.48 -4.49 -0.7 -0.66 -1.86 0.43 0.37 0.56 -0.37 -0.18 -0.69 -0.7
-0.18 -0.15 0.05 0.28 0.18 0.13 0.33 0.58 0.51 0.45 0.36 0.12 0.31 0.91 0.25 0.39 -0.21 -0.53 -0.16 -9.25 -5.55 -4.98 -0.46 -0.68 -2.2 0.33 0.62 0.55 -0.2 -0.17 0.04 0.12
-0.01 0.18 0.19 0.25 0.13 0.18 0.3 0.46 0.49 0.51 0.32 0.28 0.12 0.31 0.09 0.51 -0.64 -1.37 0.2 -2.24 -1.07 -0.78 -0.47 -0.44 -0.4 0.58 0.26 0.41 -0.41 -0.36 -0.43 -0.58

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.