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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Aerial tissue - Light - ZT1 | Aerial tissue - Light - ZT3 | Aerial tissue - Light - ZT5 | Aerial tissue - Light - ZT7 | Aerial tissue - Light - ZT9 | Aerial tissue - Light - ZT11 | Aerial tissue - Dark - ZT1 | Aerial tissue - Dark - ZT3 | Aerial tissue - Dark - ZT5 | Aerial tissue - Dark - ZT7 | Aerial tissue - Dark - ZT9 | Aerial tissue - Dark - ZT11 | Roots | Root elongation and differentiation zone | Root meristematic zone | Aerial roots and rhizophores | Shoot tips | Microphyll | Strobili | Shoot apical meristem - AC | Shoot apical meristem - Core | Shoot apical meristem - P1 | Stem - Top | Stem - Bottom | Whole plant | Aerial tissue - Stress - Dark | Aerial tissue - Stress - High light | Aerial tissue - Stress - Cont | Aerial tissue - Stress - 37C 1h | Aerial tissue - Stress - 37C 3h | Aerial tissue - Stress - 4C 1h | Aerial tissue - Stress - 4C 3h |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -1.38 | - | -3.96 | -4.82 | -4.34 | -3.33 | - | -1.57 | - | -3.69 | - | - | -5.44 | -2.08 | - | -0.42 | -4.4 | 4.13 | 0.89 | - | -3.1 | - | -1.64 | -2.08 | 0.55 | 2.17 | 0.31 | - | -0.98 | -0.37 | -0.13 | -1.07 | |
| 0.38 | -0.12 | -0.19 | -0.2 | 0.34 | 0.43 | -0.85 | -0.33 | -0.31 | -0.89 | -0.42 | 0.15 | -1.2 | -0.99 | -1.46 | -0.53 | 0.31 | 2.18 | -0.7 | -1.9 | 1.26 | 0.63 | -0.96 | -1.05 | -1.72 | -1.16 | -0.74 | -1.13 | 0.85 | 0.5 | 0.58 | -0.35 | |
| -1.06 | -0.65 | - | 0.33 | - | - | - | - | - | - | - | - | 0.4 | 0.55 | - | 0.41 | -1.37 | 4.48 | -0.84 | - | - | - | -2.23 | -0.66 | - | - | - | - | -0.52 | -1.49 | -1.58 | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | -3.32 | - | -1.05 | -0.79 | -0.79 | 3.61 | -0.03 | - | 3.46 | - | -0.8 | - | - | - | - | - | 1.65 | -0.43 | -0.33 | -0.28 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.58 | 2.25 | - | - | - | - | - | - | - | - | 1.74 | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.58 | 2.25 | - | - | - | - | - | - | - | - | 1.74 | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -0.23 | -0.47 | -0.64 | -0.2 | -0.05 | 0.03 | -0.1 | 0.1 | -0.1 | -0.08 | -0.11 | -0.19 | -0.25 | 0.29 | 0.53 | 0.03 | -0.52 | 1.08 | -0.05 | 0.07 | 0.8 | -2.1 | -0.31 | -0.21 | 0.62 | 0.77 | 0.47 | 0.47 | -0.66 | -0.68 | -0.84 | -1.29 | |
| - | -2.88 | -0.94 | - | - | - | - | - | - | - | -1.17 | - | - | - | - | - | 2.68 | 4.18 | -3.1 | - | -1.81 | - | - | - | - | - | - | - | 1.53 | -0.82 | -0.04 | 0.63 | |
| -1.87 | -1.04 | -2.17 | -3.19 | -2.39 | -0.83 | -1.53 | -0.89 | - | -1.71 | -1.26 | -0.01 | - | - | - | -6.02 | 0.6 | 3.1 | 1.64 | - | 2.69 | - | 1.2 | -0.33 | - | - | -0.44 | - | -0.26 | -0.63 | 0.78 | -0.28 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -2.12 | -3.28 | -2.92 | -2.79 | -2.29 | -1.51 | -1.85 | -0.96 | -1.6 | -2.31 | -2.86 | -1.09 | - | - | - | -4.9 | 0.82 | 3.46 | 1.67 | - | -3.96 | - | 1.89 | -0.05 | 0.34 | -1.67 | 0.04 | -2.71 | 0.23 | 0.01 | 1.19 | -0.06 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -4.31 | - | -3.64 | - | - | -1.41 | -2.96 | -2.15 | -3.89 | -4.2 | -3.72 | -4.03 | - | -2.89 | - | - | - | 4.35 | 2.68 | - | - | - | -1.67 | -2.68 | 0.93 | -0.74 | -2.58 | - | -1.47 | -1.76 | -2.8 | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | -2.55 | - | - | - | 4.73 | -2.6 | - | 2.37 | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | -2.92 | - | - | -0.49 | - | 0.01 | - | -1.89 | 0.1 | -1.1 | - | - | -0.31 | -1.75 | 2.66 | -0.21 | -0.91 | 3.3 | 2.0 | -2.04 | - | 1.92 | - | -5.28 | - | - | -1.15 | -0.57 | -1.22 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | -3.56 | -2.64 | - | - | 4.99 | - | -4.14 | - | - | - | - | - | - | - | - | - | - | - | - | |
| -2.88 | -3.95 | -4.72 | -4.23 | -3.36 | -3.32 | -4.67 | -3.1 | -2.62 | -2.16 | -2.04 | -2.98 | 0.85 | -1.68 | -5.38 | 2.23 | -6.3 | 4.08 | -1.85 | - | - | - | -3.96 | -4.69 | 1.98 | 0.51 | -0.79 | -6.54 | -3.85 | -2.45 | -2.94 | -3.42 | |
| - | - | - | - | -0.14 | - | - | - | - | - | - | - | - | - | - | - | - | 4.61 | 0.44 | - | - | 1.98 | - | - | - | - | 0.36 | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | -1.05 | -2.3 | -2.91 | 0.82 | 0.64 | 3.24 | 1.88 | - | - | - | -0.16 | 0.57 | -0.15 | 0.49 | 0.73 | 1.02 | 1.08 | 0.97 | 0.57 | -0.3 | |
| -1.58 | -1.57 | -3.24 | -4.96 | -3.33 | -0.94 | -1.79 | -1.0 | -1.03 | -1.76 | -3.24 | -1.97 | - | - | - | -6.0 | 0.44 | 3.82 | 0.81 | -2.28 | -0.46 | - | 0.7 | -1.71 | -0.81 | -0.19 | 0.83 | -1.79 | 0.95 | -0.05 | 0.55 | -0.6 | |
| -4.04 | -4.85 | -4.04 | -3.56 | -3.58 | -4.58 | -3.19 | -1.25 | -2.51 | -3.96 | -3.35 | -2.76 | -3.52 | -3.61 | -3.04 | -2.93 | 0.38 | 3.36 | 2.03 | - | 2.42 | - | 1.12 | -0.77 | 1.16 | -1.04 | -1.42 | - | 0.83 | -0.74 | -0.59 | -1.58 | |
| - | - | - | - | - | - | - | - | - | - | - | - | -5.25 | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | -5.39 | - | - | - | - | - | - | - | - | - | -3.1 | - | -3.04 | - | 4.85 | 1.2 | - | -2.57 | - | - | - | - | - | -2.46 | -2.64 | - | - | - | - | |
| -1.25 | -0.88 | -1.68 | -2.43 | -3.34 | -3.7 | -2.44 | -2.32 | -2.11 | -1.98 | -2.21 | -1.97 | -6.17 | 0.42 | -1.92 | -3.55 | 0.67 | 4.2 | 1.78 | -6.09 | -4.9 | - | -4.15 | -4.28 | - | -2.46 | - | - | 0.65 | 0.23 | -1.27 | -1.21 | |
| -0.76 | - | - | - | - | - | -2.78 | -1.99 | -1.72 | -3.04 | -2.8 | -1.71 | - | - | - | - | 3.07 | 3.98 | -2.6 | - | - | - | - | -1.68 | - | -1.52 | -0.32 | -0.4 | 0.51 | 0.4 | -2.65 | -0.71 | |
| - | - | -1.66 | - | - | - | -1.38 | - | -2.33 | - | - | - | - | - | - | -2.14 | - | 4.89 | -2.31 | - | - | - | -2.35 | - | - | -1.13 | - | - | -2.37 | -2.27 | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.44 | 2.29 | - | - | - | 2.44 | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -3.16 | -3.57 | -4.41 | - | -4.38 | -3.7 | -1.84 | -6.37 | -4.4 | -3.01 | -5.28 | -2.54 | - | - | - | -3.26 | 0.58 | 3.9 | 0.64 | -1.22 | 0.96 | - | 0.72 | -1.38 | -0.27 | -2.0 | -1.21 | -2.53 | 1.48 | 0.38 | 0.69 | 0.12 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.97 | - | - | - | - | - | - | - | - | - | - | - | -1.47 | - | -2.17 | |
| -2.33 | -2.21 | - | -1.89 | -1.47 | -1.45 | -1.55 | -1.17 | -0.47 | -3.51 | -2.82 | -2.88 | -2.34 | -2.24 | -2.86 | -2.22 | -4.06 | 4.66 | 0.4 | - | - | - | -0.72 | -2.06 | - | - | -2.89 | - | -3.21 | -4.06 | - | -2.58 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | -1.59 | 0.11 | -0.13 | 3.4 | 2.07 | - | - | - | 1.9 | 1.44 | - | - | - | 1.34 | 1.25 | - | 0.49 | 1.12 | |
| -1.28 | -1.87 | -4.2 | -3.14 | -3.92 | -1.43 | -2.52 | -0.89 | -1.06 | -1.71 | -1.44 | -1.98 | -7.16 | - | - | -8.72 | -0.16 | 3.8 | 1.58 | - | -2.63 | - | -2.49 | -5.05 | -2.46 | 2.87 | 0.87 | -4.32 | -1.57 | -2.63 | -1.93 | -2.37 | |
| - | - | 0.24 | - | - | - | - | - | - | - | - | - | - | - | -0.4 | - | - | 3.92 | 0.15 | - | 2.38 | - | - | - | - | - | 1.63 | 2.48 | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -0.67 | - | 4.97 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -0.29 | -0.94 | -1.29 | -0.58 | -2.45 | -0.46 | 0.32 | 0.35 | -1.26 | -0.02 | -0.03 | -0.07 | -1.81 | 0.58 | -0.71 | -1.73 | -4.15 | 3.71 | -3.24 | -2.55 | 2.17 | - | -2.69 | -3.19 | - | -0.24 | -1.45 | -1.6 | -3.24 | -3.17 | -4.27 | -3.32 | |
| -1.65 | -4.44 | -2.65 | -0.76 | - | -0.33 | -3.37 | -2.06 | -1.04 | -1.75 | -2.64 | -2.73 | -1.72 | -2.57 | -4.94 | -1.38 | -0.46 | 3.53 | 2.01 | - | 1.83 | - | 0.32 | 0.63 | 0.58 | -2.11 | -2.81 | -1.99 | -0.32 | -0.62 | -0.72 | -0.05 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.9 | - | - | - | - | 1.08 | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.93 | 0.09 | - | - | - | - | -0.97 | - | - | - | - | - | - | - | - | |
| -17.08 | - | - | - | -14.85 | -16.27 | -12.75 | - | -18.51 | - | -13.02 | - | - | - | -17.83 | - | - | 4.94 | - | - | - | - | 0.41 | -9.97 | - | - | - | - | - | -13.23 | - | - | |
| -2.68 | -2.77 | -4.1 | -5.04 | -5.99 | -4.68 | -4.19 | -3.25 | -3.79 | -2.22 | -4.24 | -3.19 | -0.15 | -4.83 | -4.5 | -2.95 | 1.7 | 3.65 | 2.3 | - | -4.75 | - | -0.19 | -0.56 | -1.74 | -2.39 | -2.04 | -3.17 | 0.87 | 1.59 | -0.23 | -0.0 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -1.18 | -1.63 | -1.91 | -0.25 | - | - | -0.04 | - | - | -1.17 | - | - | -0.19 | -1.29 | 1.07 | 0.39 | -1.74 | 4.44 | -0.9 | - | - | - | - | -1.87 | - | - | - | - | -0.8 | -1.81 | -1.83 | - | |
| -6.5 | -1.8 | -1.5 | - | -1.13 | -3.31 | - | -2.98 | -3.32 | -3.93 | -2.57 | -4.08 | -3.64 | -0.74 | -3.11 | -0.42 | -3.79 | 3.97 | -0.42 | - | - | - | -3.04 | -1.57 | 1.72 | 1.86 | 1.6 | -1.01 | -2.34 | -1.19 | -1.59 | -1.4 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -2.08 | - | -2.84 | - | - | -1.93 | -3.56 | - | - | - | - | -3.53 | - | - | - | - | 0.91 | 3.6 | 0.67 | - | - | - | 1.63 | -0.18 | - | - | 2.05 | -0.18 | 1.26 | 0.32 | 1.16 | -0.49 | |
| -2.08 | - | -2.84 | - | - | -1.93 | -3.56 | - | - | - | - | -3.53 | - | - | - | - | 0.91 | 3.6 | 0.67 | - | - | - | 1.63 | -0.18 | - | - | 2.05 | -0.18 | 1.26 | 0.32 | 1.16 | -0.49 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.