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Heatmap: Cluster_87 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
131.58 124.09 108.16 139.7 92.46 122.96 74.42 109.51 93.28 138.31 97.9 201.67 229.53 74.13 22.18 164.48 165.0 267.5 141.63 1529.38 868.74 979.08 159.18 190.21 467.39 227.34 106.18 158.58 202.35 194.19 184.84 235.02
31.05 21.68 18.57 26.47 21.66 32.15 29.75 36.84 29.88 40.56 31.98 36.83 39.51 35.41 22.32 45.46 15.73 24.73 42.67 239.35 84.74 171.72 26.08 30.96 25.55 23.45 22.14 12.24 27.58 27.65 48.05 49.79
23.31 17.49 20.42 19.18 30.28 38.83 39.82 40.29 33.1 40.15 32.21 22.94 56.46 29.12 53.96 47.59 42.3 93.77 37.6 463.15 108.63 295.91 46.18 53.18 43.59 66.68 75.62 45.6 36.49 34.72 46.99 69.13
35.46 38.89 40.34 41.74 40.34 43.85 43.49 45.15 49.59 46.44 48.15 39.93 55.42 37.98 95.17 60.93 65.43 67.64 72.29 140.6 85.98 93.38 58.74 67.29 71.85 47.56 26.86 33.98 55.72 57.98 37.72 32.57
16.41 19.99 17.69 16.96 16.39 18.56 15.55 18.86 20.85 16.06 18.01 17.57 8.02 9.59 17.07 11.04 15.14 13.35 10.32 92.31 14.02 88.43 11.59 10.9 6.49 17.09 19.64 29.09 10.68 10.29 15.07 15.36
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.65 0.0 0.0 2.68 0.9 0.0 0.95 321.46 47.76 171.44 1.4 0.43 40.57 0.0 0.0 0.0 1.55 1.97 1.03 0.49
5.26 6.37 6.08 5.37 6.57 8.78 5.87 7.66 5.72 6.56 6.35 4.8 8.23 6.2 9.3 8.23 4.27 2.01 8.12 16.54 9.59 14.48 5.54 5.83 4.18 7.65 5.98 6.67 4.31 5.1 2.62 1.97
7.98 8.76 9.63 11.84 15.91 14.84 9.33 6.7 8.29 8.23 8.22 6.33 2.32 1.52 25.27 4.18 15.27 13.49 4.83 74.33 10.01 35.61 24.42 26.19 12.54 5.45 9.03 10.36 7.39 10.02 6.29 4.75
2.35 2.02 2.6 2.48 4.04 3.01 3.64 2.7 4.22 2.29 2.73 2.03 6.66 3.17 23.52 8.9 3.62 2.6 5.95 39.85 2.27 22.44 2.42 0.6 0.92 0.96 0.8 1.86 2.56 2.5 3.43 2.63
9.24 5.73 4.59 5.61 8.25 6.87 4.36 6.71 7.05 6.79 4.0 7.31 26.61 5.65 4.22 19.59 8.99 16.48 13.43 104.84 21.29 54.95 14.1 15.9 22.78 9.06 4.68 5.25 8.36 10.36 9.57 9.17
3.59 2.46 0.28 0.01 0.15 10.25 1.58 0.95 0.0 5.66 3.99 1.73 20.41 2.6 0.0 7.5 0.32 0.0 1.45 32.73 0.21 15.81 2.68 4.94 0.0 0.18 1.89 0.0 0.59 0.94 0.0 0.39
3.14 4.42 5.37 4.9 7.2 10.18 10.48 10.04 7.17 6.07 4.05 3.56 3.71 1.85 19.57 4.38 4.09 3.66 6.74 37.21 7.23 18.58 3.73 4.36 14.68 6.83 18.02 18.54 3.39 4.61 2.05 2.44
21.62 27.04 22.15 22.72 23.07 28.78 26.22 25.84 27.18 27.48 25.68 24.72 46.25 34.25 63.43 51.26 19.59 15.26 27.76 214.62 38.29 136.66 21.7 23.92 54.85 106.09 69.08 72.05 17.07 17.48 16.1 17.74
28.18 33.61 28.99 37.22 36.03 40.65 38.46 40.77 40.01 31.97 37.23 31.53 39.78 63.71 74.76 43.65 27.6 25.2 34.64 221.17 67.43 155.94 35.95 39.84 68.04 23.05 34.52 36.47 30.19 32.18 22.12 21.96
20.94 24.02 24.92 26.12 24.91 24.16 29.06 28.15 25.43 24.23 24.0 22.14 4.46 7.94 20.29 10.06 28.95 32.46 24.54 79.62 17.89 50.87 17.77 15.49 52.68 27.21 37.02 32.04 25.11 24.32 20.45 20.93
4.64 4.51 4.67 3.56 2.46 5.17 3.44 3.83 5.34 6.15 4.32 4.31 4.18 5.83 6.94 6.29 2.14 3.94 5.69 32.3 5.64 11.84 3.98 4.88 11.95 4.06 5.99 6.45 2.87 3.47 3.08 4.06
0.03 0.02 0.0 0.3 0.21 0.1 0.23 0.06 0.0 0.04 0.11 0.33 0.05 0.05 0.36 0.0 0.0 0.19 1.12 4.14 0.0 0.0 0.02 0.0 0.0 0.0 0.24 0.12 0.08 0.03 0.11 0.05
11.62 13.89 14.73 13.1 17.51 18.01 15.14 16.36 13.83 14.29 13.28 11.34 17.24 14.71 21.9 18.56 11.88 9.57 18.33 34.06 7.43 24.48 14.5 15.44 24.42 14.24 12.07 12.68 10.91 12.86 7.79 8.84
0.0 0.13 0.0 0.0 0.0 0.0 0.0 0.61 0.0 0.19 0.0 0.1 1.04 0.5 1.51 2.4 0.79 0.67 1.44 5.82 4.52 4.36 0.73 1.06 3.97 0.39 0.47 0.84 0.65 1.1 0.0 0.09
1.25 6.46 14.22 6.32 3.76 2.24 3.84 4.39 3.09 2.86 4.3 1.85 10.64 3.71 7.88 10.66 12.27 6.03 14.66 69.61 7.93 26.73 12.66 14.49 7.3 3.5 9.42 1.71 13.6 23.74 11.65 2.65
1.14 1.25 2.14 1.06 1.99 3.34 2.28 2.27 3.19 1.37 3.1 1.29 10.65 3.74 4.49 8.93 3.99 2.21 9.08 19.61 11.23 12.62 5.5 6.27 6.91 2.05 5.89 3.49 5.67 5.18 3.97 4.25
3.33 3.54 6.17 4.84 2.78 4.19 4.84 5.38 6.99 5.48 8.84 5.7 14.44 4.97 9.97 14.99 8.74 13.49 14.47 81.99 10.0 49.19 13.17 15.85 27.59 10.13 8.57 7.17 8.38 10.86 6.65 11.5
0.32 0.25 0.33 0.35 0.3 0.29 0.47 0.4 0.58 0.17 0.39 0.41 2.04 0.94 2.6 1.13 0.29 0.08 0.79 8.04 1.31 2.66 0.08 0.17 2.01 0.1 0.28 0.45 0.28 0.31 0.26 0.28
1.53 1.83 1.5 2.49 2.53 2.25 2.53 1.93 1.42 0.67 2.17 1.42 0.7 2.07 9.88 0.88 2.42 0.09 3.87 26.69 1.54 6.83 2.18 1.85 8.87 4.96 8.28 4.65 2.61 2.89 1.1 0.84
0.12 0.39 0.13 0.05 0.71 0.0 0.0 0.0 0.2 0.76 0.07 0.47 0.0 0.0 0.19 0.0 0.0 0.02 0.0 2.06 0.8 1.82 0.0 0.0 0.64 0.0 0.18 0.0 0.0 0.0 0.0 0.0
17.79 19.68 18.61 18.44 18.96 17.22 16.57 17.18 14.66 13.22 13.1 14.41 30.21 24.94 47.77 25.61 22.18 23.61 24.26 166.5 73.93 51.64 23.28 23.8 89.91 11.95 21.62 21.63 22.22 23.61 21.12 19.28
38.98 42.38 35.66 40.28 46.2 49.9 47.18 35.42 32.51 23.37 26.39 26.3 65.73 47.66 132.61 80.83 57.53 54.42 73.68 296.13 77.05 332.63 57.35 60.12 32.49 118.8 185.69 190.76 40.59 40.95 24.03 22.92
0.2 0.19 0.32 0.35 0.22 0.63 0.1 0.64 0.5 0.19 0.16 0.14 0.33 0.25 0.47 0.42 0.92 1.13 0.41 14.03 3.94 2.53 1.0 0.57 0.37 0.11 0.39 0.75 1.46 1.4 1.53 1.07
5.26 4.58 6.08 3.84 6.14 5.67 5.37 4.88 3.59 3.45 2.76 2.91 2.16 2.29 7.3 2.11 3.02 0.28 3.67 45.79 12.49 12.36 3.61 3.51 28.65 3.02 4.92 2.06 2.13 2.04 4.28 5.0
10.64 8.71 8.63 11.17 13.78 16.57 12.29 12.16 9.56 11.98 10.27 9.46 21.77 18.41 34.42 20.18 15.23 16.86 29.7 171.93 76.22 147.49 19.23 20.5 70.42 23.03 32.73 34.96 15.22 14.97 20.36 20.18
0.06 0.05 0.48 0.17 0.17 0.1 0.05 0.62 0.36 0.89 0.31 0.3 2.82 1.37 1.25 0.82 0.56 0.41 1.34 20.45 0.0 0.0 0.16 0.37 0.0 0.0 0.0 0.0 0.53 0.22 0.21 0.15
5.27 4.29 4.53 4.36 5.47 5.85 6.93 5.63 5.22 4.73 4.53 3.82 4.17 6.09 15.36 4.05 4.78 0.46 6.48 23.84 11.25 14.47 4.87 5.05 7.13 6.39 8.1 7.04 4.72 4.96 4.85 5.54
0.62 0.88 0.73 0.64 1.01 0.56 0.83 0.59 0.25 0.25 0.76 0.6 1.09 0.5 1.6 0.65 0.52 0.93 1.5 18.21 4.5 13.53 0.8 0.78 11.15 1.54 1.3 0.93 0.3 0.87 0.14 0.37
0.19 0.0 0.0 0.13 0.0 0.16 0.21 0.31 0.6 0.26 0.13 0.1 0.0 0.07 1.06 0.08 0.11 0.32 0.17 3.23 0.21 1.72 0.43 0.24 0.47 1.15 0.49 1.23 0.22 0.58 0.38 0.15
0.07 0.24 0.17 0.26 0.13 0.39 0.56 0.12 0.0 0.23 0.11 0.1 0.02 0.36 0.92 0.07 0.11 0.06 0.04 1.95 0.0 0.0 0.02 0.23 0.35 0.09 0.0 0.57 0.09 0.16 0.31 0.07
0.26 0.22 0.22 0.45 0.4 0.48 0.33 0.1 0.28 0.5 0.42 0.28 0.05 0.03 1.31 0.13 0.25 0.3 0.31 6.54 0.16 3.01 0.06 0.1 0.4 0.07 0.27 0.07 0.08 0.1 0.3 0.36
1.04 0.87 0.55 0.85 0.33 1.32 0.86 0.84 0.73 1.07 0.8 0.97 1.56 1.42 2.36 1.92 0.97 0.41 1.03 11.38 8.02 5.42 1.39 1.24 3.14 1.69 1.75 1.2 0.66 0.89 0.86 0.62
5.11 5.56 5.36 7.44 10.7 11.1 15.33 11.05 11.15 11.71 11.68 6.5 15.66 7.2 5.56 10.84 6.67 11.08 5.6 21.95 4.97 11.68 8.41 12.36 3.03 5.04 3.0 2.8 5.92 6.83 6.77 7.21
0.36 0.46 0.47 0.31 1.18 0.67 0.8 0.44 0.43 0.28 0.24 0.19 0.22 0.27 2.29 0.29 0.27 0.3 0.27 4.13 0.43 0.0 0.22 0.21 0.1 0.11 0.53 0.6 0.22 0.34 0.07 0.1
0.12 0.18 0.0 0.36 0.05 0.6 0.41 0.13 0.14 0.16 0.26 0.23 0.61 0.39 1.94 0.41 0.35 0.0 2.54 8.79 1.56 1.71 1.13 0.84 3.26 1.2 1.03 1.94 0.54 0.56 0.2 0.14
130.69 124.28 157.32 146.66 140.86 158.18 153.97 186.63 170.03 176.84 188.25 168.61 92.4 89.15 114.66 101.4 109.32 136.6 85.41 421.12 115.92 268.95 108.69 120.59 45.31 143.7 144.46 129.66 105.5 116.91 98.74 112.03
2.61 2.5 2.69 2.6 3.43 3.38 2.04 2.47 2.58 2.46 2.08 1.95 1.75 2.26 7.11 2.34 2.43 1.57 4.9 12.66 4.02 10.05 2.56 1.73 4.23 6.23 3.68 3.5 2.1 2.42 2.06 2.29
2.92 2.75 2.51 2.37 2.74 3.82 3.41 3.82 2.83 2.87 2.38 2.2 2.52 1.77 5.88 2.16 1.53 0.05 3.28 19.08 0.49 2.0 1.52 1.71 5.03 2.22 5.15 6.06 1.08 1.45 1.84 1.27
0.08 0.08 0.27 0.02 0.41 0.17 0.41 0.41 0.21 0.15 0.05 0.13 0.08 0.09 0.02 0.17 0.35 0.67 0.36 2.25 0.12 2.03 0.33 0.33 1.17 0.46 0.74 0.48 0.5 0.67 0.15 0.22
2.13 3.39 2.97 3.8 4.31 4.28 5.55 4.72 5.52 4.18 5.35 3.51 1.38 2.02 20.37 2.78 3.23 3.4 4.5 44.28 18.85 19.83 1.14 1.26 10.67 2.64 5.81 5.75 1.64 2.9 4.32 4.56
18.99 21.74 22.63 23.13 24.74 32.98 31.05 19.6 22.92 16.48 19.94 16.89 19.35 9.7 69.18 22.76 21.74 24.1 21.04 113.4 9.4 104.58 10.5 10.9 27.25 21.21 37.25 35.4 17.59 20.42 10.92 13.38
3.09 6.47 3.13 5.53 6.42 8.95 8.43 9.92 7.05 11.91 7.67 4.11 16.55 5.12 11.57 15.66 6.44 8.76 9.38 38.22 31.05 46.46 11.87 13.24 19.01 12.48 10.44 12.58 8.27 9.41 3.73 5.48
176.35 183.56 242.89 177.76 96.28 187.18 204.93 210.98 159.93 158.74 180.32 159.88 283.24 347.88 354.26 312.81 195.48 390.8 196.63 1309.97 323.44 762.34 217.99 219.6 247.72 417.66 480.28 393.64 184.21 223.51 252.37 283.9
7.54 6.85 9.78 9.59 12.07 13.65 14.31 13.2 12.82 11.16 9.73 7.33 22.66 8.81 26.28 24.65 15.95 12.41 22.47 63.6 23.6 58.46 17.24 19.12 51.11 22.15 25.09 27.04 18.77 18.8 12.39 14.05
66.5 61.08 57.76 61.84 60.77 69.06 64.12 55.51 50.46 53.72 53.88 48.01 70.32 51.91 49.02 79.81 49.86 77.42 67.13 235.4 35.18 173.83 55.42 56.99 22.4 39.94 62.83 66.39 54.19 52.51 39.95 40.36
12.33 14.69 4.08 23.21 22.78 16.17 13.83 8.28 18.33 19.35 9.22 12.38 60.83 7.03 19.97 76.87 68.36 73.76 165.48 244.47 157.92 96.86 57.43 62.36 149.97 5.71 9.55 0.0 63.13 75.1 79.8 77.93
0.13 0.0 0.0 0.0 0.33 0.27 0.13 0.0 0.0 0.0 0.62 0.18 1.43 0.07 0.35 2.26 1.28 3.82 0.31 4.76 1.91 0.79 1.9 1.22 0.58 0.0 0.16 0.0 0.8 1.62 1.81 1.84
0.22 0.32 0.22 0.32 0.25 0.35 0.42 0.22 0.54 0.13 0.17 0.27 0.41 0.15 0.5 0.42 0.39 0.61 0.31 7.35 0.74 4.83 0.45 0.35 0.64 0.19 0.2 0.3 0.33 0.36 0.15 0.16
56.25 35.22 36.33 47.39 43.26 54.8 46.51 50.45 52.19 57.76 48.97 57.12 102.77 57.54 88.42 105.77 58.72 86.07 102.06 494.13 171.99 418.4 61.93 73.86 79.3 64.96 47.82 41.86 82.58 78.85 66.38 82.69
34.87 32.79 34.25 40.7 50.41 47.94 35.63 30.44 35.17 38.76 38.56 37.23 60.18 17.9 28.22 68.55 32.47 15.93 41.94 108.5 54.05 131.5 30.52 31.36 16.23 30.45 17.49 16.34 27.14 25.58 16.92 18.88
15.21 16.68 16.33 18.84 16.25 21.9 21.87 17.28 18.07 17.95 16.03 17.36 38.59 20.93 34.13 37.45 34.1 47.64 30.53 121.04 24.17 39.51 33.39 38.65 61.82 20.35 29.15 36.6 28.83 26.69 25.62 29.91
6.32 5.85 17.3 5.72 18.1 6.92 7.34 2.3 4.97 1.7 4.37 4.03 71.2 27.5 117.9 92.02 68.68 102.17 60.65 611.75 237.6 347.01 57.54 54.29 181.13 10.98 17.18 42.18 63.33 68.22 41.98 45.7
0.38 0.63 0.78 0.68 0.7 1.21 0.41 0.76 0.25 0.38 0.49 0.34 0.29 0.36 0.24 0.38 0.34 0.93 0.44 4.26 0.19 0.0 0.39 0.55 0.22 0.25 0.82 1.02 0.25 0.49 0.12 0.3
26.84 31.85 31.63 44.2 56.49 42.02 46.13 36.27 39.48 36.78 34.27 32.05 69.46 38.82 39.53 53.13 32.24 25.8 36.0 127.62 63.39 109.74 46.35 47.03 8.77 21.95 15.73 13.28 25.07 26.81 25.53 27.04

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)