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Gene | Aerial tissue - Light - ZT1 | Aerial tissue - Light - ZT3 | Aerial tissue - Light - ZT5 | Aerial tissue - Light - ZT7 | Aerial tissue - Light - ZT9 | Aerial tissue - Light - ZT11 | Aerial tissue - Dark - ZT1 | Aerial tissue - Dark - ZT3 | Aerial tissue - Dark - ZT5 | Aerial tissue - Dark - ZT7 | Aerial tissue - Dark - ZT9 | Aerial tissue - Dark - ZT11 | Roots | Root elongation and differentiation zone | Root meristematic zone | Aerial roots and rhizophores | Shoot tips | Microphyll | Strobili | Shoot apical meristem - AC | Shoot apical meristem - Core | Shoot apical meristem - P1 | Stem - Top | Stem - Bottom | Whole plant | Aerial tissue - Stress - Dark | Aerial tissue - Stress - High light | Aerial tissue - Stress - Cont | Aerial tissue - Stress - 37C 1h | Aerial tissue - Stress - 37C 3h | Aerial tissue - Stress - 4C 1h | Aerial tissue - Stress - 4C 3h |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1.39 | 2.35 | 0.73 | 1.13 | 1.81 | 2.77 | 3.65 | 2.19 | 2.03 | 2.98 | 1.36 | 1.32 | 0.76 | 0.6 | 2.15 | 0.66 | 1.77 | 1.19 | 1.68 | 2.2 | 0.0 | 0.0 | 1.96 | 1.25 | 2.29 | 1.16 | 6.28 | 4.15 | 3.59 | 2.72 | 2.03 | 1.53 | |
0.97 | 1.21 | 1.27 | 3.07 | 4.37 | 4.25 | 1.91 | 1.55 | 1.89 | 1.07 | 1.28 | 0.92 | 0.92 | 0.69 | 0.77 | 5.53 | 4.49 | 1.61 | 2.83 | 3.16 | 0.5 | 0.18 | 2.84 | 2.1 | 1.16 | 3.72 | 1.6 | 2.75 | 2.18 | 2.34 | 1.69 | 0.48 | |
13.59 | 11.32 | 10.14 | 12.05 | 12.55 | 12.44 | 12.33 | 12.49 | 11.9 | 13.81 | 12.92 | 13.36 | 8.33 | 8.31 | 11.39 | 9.8 | 8.23 | 4.91 | 12.82 | 6.04 | 0.0 | 2.71 | 8.92 | 9.14 | 5.48 | 12.88 | 14.13 | 12.79 | 9.24 | 9.25 | 8.9 | 11.45 | |
40.63 | 45.94 | 47.2 | 56.78 | 58.65 | 56.6 | 66.64 | 59.8 | 67.65 | 59.8 | 50.53 | 46.49 | 54.18 | 40.17 | 95.7 | 54.31 | 45.16 | 41.08 | 59.14 | 30.4 | 0.4 | 11.16 | 53.34 | 50.65 | 3.28 | 62.53 | 66.81 | 63.25 | 54.66 | 51.84 | 47.11 | 45.55 | |
2.0 | 0.79 | 1.22 | 1.22 | 2.99 | 3.01 | 4.35 | 4.18 | 4.59 | 3.43 | 4.55 | 2.73 | 0.88 | 0.41 | 3.13 | 0.75 | 3.28 | 1.63 | 3.26 | 5.35 | 4.97 | 1.25 | 2.81 | 2.06 | 3.6 | 3.4 | 3.67 | 1.49 | 4.82 | 5.67 | 3.55 | 3.59 | |
15.37 | 14.78 | 14.11 | 15.2 | 14.08 | 15.82 | 14.55 | 14.69 | 16.01 | 15.31 | 15.33 | 14.45 | 14.22 | 18.86 | 24.59 | 16.28 | 11.79 | 10.33 | 11.6 | 15.93 | 4.95 | 2.85 | 12.49 | 13.13 | 3.88 | 8.61 | 7.99 | 9.79 | 11.53 | 12.71 | 9.22 | 9.16 | |
28.14 | 20.21 | 15.62 | 20.25 | 23.3 | 30.03 | 40.1 | 32.2 | 34.95 | 34.41 | 23.41 | 25.23 | 9.11 | 5.96 | 16.76 | 13.59 | 26.88 | 23.87 | 40.64 | 38.6 | 2.4 | 0.47 | 23.95 | 20.06 | 1.94 | 8.36 | 13.35 | 12.65 | 44.97 | 44.56 | 53.1 | 41.16 | |
1.11 | 1.41 | 1.5 | 1.41 | 1.52 | 1.5 | 2.1 | 1.72 | 1.53 | 1.67 | 1.03 | 0.75 | 1.18 | 0.8 | 2.75 | 1.09 | 0.57 | 0.21 | 1.66 | 2.05 | 0.48 | 0.79 | 0.65 | 0.69 | 0.69 | 1.49 | 1.43 | 1.37 | 0.79 | 0.81 | 1.35 | 1.33 | |
9.12 | 4.95 | 2.63 | 3.38 | 4.06 | 6.7 | 7.14 | 8.85 | 7.64 | 8.15 | 6.64 | 8.47 | 1.25 | 1.0 | 3.35 | 1.94 | 4.3 | 5.22 | 3.92 | 7.15 | 2.21 | 6.16 | 3.24 | 2.6 | 1.14 | 4.09 | 8.01 | 9.72 | 7.96 | 8.27 | 11.55 | 7.87 | |
2.95 | 1.78 | 1.66 | 2.18 | 1.92 | 2.0 | 1.2 | 1.34 | 1.29 | 2.46 | 1.26 | 2.43 | 0.52 | 1.24 | 0.36 | 2.0 | 1.65 | 2.75 | 6.96 | 4.79 | 0.0 | 0.0 | 2.29 | 3.13 | 1.9 | 2.96 | 2.33 | 2.52 | 1.76 | 2.5 | 3.63 | 4.59 | |
77.76 | 78.43 | 74.65 | 76.38 | 74.36 | 76.39 | 66.56 | 70.8 | 79.09 | 76.83 | 72.25 | 76.28 | 62.87 | 75.69 | 77.9 | 93.88 | 48.29 | 33.08 | 79.91 | 48.75 | 34.15 | 50.07 | 54.27 | 61.26 | 32.91 | 54.69 | 59.69 | 64.37 | 56.22 | 62.66 | 45.12 | 46.44 | |
21.18 | 18.5 | 20.0 | 21.98 | 21.51 | 21.52 | 21.26 | 25.22 | 24.62 | 24.45 | 22.6 | 22.84 | 26.69 | 13.77 | 22.33 | 24.93 | 13.73 | 7.35 | 24.19 | 17.15 | 2.77 | 3.3 | 16.77 | 17.97 | 7.07 | 30.52 | 22.13 | 23.87 | 15.23 | 15.7 | 15.51 | 15.55 | |
0.62 | 0.86 | 0.55 | 0.98 | 0.57 | 1.26 | 1.3 | 1.18 | 1.2 | 0.92 | 0.68 | 0.62 | 0.06 | 0.05 | 0.19 | 0.35 | 1.73 | 0.76 | 3.1 | 2.34 | 0.14 | 1.03 | 0.68 | 0.41 | 1.05 | 1.89 | 3.36 | 4.8 | 2.27 | 2.49 | 0.53 | 0.28 | |
8.65 | 11.65 | 13.05 | 12.55 | 15.0 | 12.66 | 12.07 | 11.27 | 14.21 | 10.88 | 10.85 | 8.93 | 8.59 | 11.39 | 14.37 | 11.07 | 7.78 | 4.76 | 5.75 | 11.91 | 1.94 | 4.35 | 15.07 | 14.48 | 5.15 | 6.22 | 6.45 | 8.73 | 6.03 | 7.96 | 4.63 | 4.94 | |
1.74 | 2.73 | 3.22 | 3.36 | 2.88 | 2.74 | 2.6 | 2.59 | 1.99 | 2.24 | 2.42 | 1.81 | 0.86 | 0.32 | 0.67 | 0.3 | 2.13 | 1.23 | 1.99 | 1.35 | 0.45 | 0.83 | 2.25 | 1.96 | 0.35 | 1.95 | 2.32 | 2.61 | 1.8 | 1.79 | 1.0 | 0.78 | |
68.07 | 61.06 | 79.61 | 61.58 | 85.19 | 68.12 | 70.97 | 61.63 | 73.91 | 92.51 | 95.49 | 72.74 | 205.79 | 29.61 | 76.32 | 138.54 | 51.97 | 160.06 | 38.81 | 85.8 | 5.06 | 26.77 | 231.01 | 165.45 | 4.9 | 74.59 | 32.67 | 26.84 | 59.26 | 61.65 | 63.59 | 64.12 | |
643.23 | 644.47 | 483.26 | 608.98 | 720.89 | 693.71 | 620.21 | 634.24 | 786.57 | 781.42 | 574.06 | 685.41 | 1366.74 | 706.1 | 171.67 | 1015.71 | 727.31 | 969.48 | 853.64 | 926.04 | 44.69 | 6.32 | 1011.34 | 994.09 | 191.74 | 999.24 | 772.1 | 866.73 | 970.53 | 852.17 | 580.71 | 727.81 | |
274.8 | 238.86 | 284.79 | 289.71 | 239.8 | 242.59 | 215.47 | 244.91 | 362.68 | 237.98 | 232.25 | 262.7 | 362.06 | 338.31 | 243.91 | 514.31 | 320.29 | 431.16 | 401.09 | 339.87 | 80.98 | 184.75 | 565.31 | 611.03 | 93.37 | 177.4 | 103.78 | 113.64 | 352.59 | 340.87 | 326.11 | 344.52 | |
13.04 | 12.01 | 11.6 | 11.58 | 10.83 | 11.1 | 11.57 | 10.16 | 9.97 | 12.09 | 11.44 | 10.83 | 24.05 | 2.73 | 6.99 | 12.52 | 9.73 | 5.97 | 12.13 | 21.88 | 5.11 | 3.59 | 14.75 | 14.22 | 9.04 | 20.13 | 15.88 | 18.19 | 10.7 | 10.58 | 8.83 | 7.52 | |
3.44 | 2.91 | 3.44 | 4.1 | 4.9 | 3.58 | 4.07 | 4.77 | 3.04 | 3.33 | 2.74 | 2.72 | 2.63 | 2.23 | 2.63 | 4.77 | 2.58 | 1.32 | 7.69 | 4.65 | 0.23 | 0.11 | 5.13 | 5.06 | 2.71 | 3.93 | 4.46 | 4.21 | 4.3 | 4.34 | 3.55 | 3.06 | |
3.5 | 3.42 | 2.06 | 1.79 | 2.22 | 4.04 | 5.84 | 6.74 | 6.95 | 4.31 | 4.59 | 4.93 | 1.86 | 0.89 | 2.74 | 2.74 | 6.79 | 11.7 | 5.59 | 10.75 | 9.24 | 0.18 | 6.86 | 6.01 | 9.64 | 5.27 | 9.85 | 8.57 | 8.39 | 10.35 | 9.02 | 8.73 | |
33.92 | 25.9 | 21.12 | 33.76 | 29.58 | 33.44 | 29.95 | 41.45 | 46.68 | 37.27 | 36.25 | 35.32 | 52.74 | 43.12 | 44.09 | 41.8 | 34.33 | 44.97 | 38.74 | 25.69 | 8.4 | 5.63 | 35.03 | 42.1 | 9.09 | 21.6 | 23.84 | 23.19 | 45.14 | 42.46 | 58.73 | 59.53 | |
5.77 | 6.05 | 6.62 | 7.59 | 9.63 | 7.78 | 6.32 | 7.2 | 7.65 | 6.71 | 6.52 | 5.55 | 7.09 | 5.59 | 9.65 | 8.49 | 5.75 | 3.36 | 9.11 | 7.74 | 0.91 | 0.48 | 6.92 | 7.07 | 1.28 | 9.15 | 7.8 | 8.75 | 6.48 | 6.15 | 4.2 | 4.87 | |
10.98 | 12.64 | 12.97 | 13.02 | 16.86 | 13.33 | 14.74 | 14.71 | 15.73 | 15.46 | 18.97 | 16.15 | 17.66 | 15.43 | 30.83 | 15.5 | 9.85 | 12.95 | 17.91 | 8.26 | 4.69 | 0.0 | 13.79 | 18.68 | 7.13 | 24.62 | 21.23 | 20.03 | 10.81 | 12.65 | 7.25 | 13.84 | |
21.97 | 22.27 | 19.76 | 26.24 | 25.82 | 26.43 | 28.18 | 31.51 | 28.94 | 29.6 | 27.41 | 28.16 | 26.52 | 20.06 | 31.32 | 30.39 | 15.14 | 9.17 | 25.44 | 11.07 | 8.62 | 13.63 | 20.8 | 24.38 | 22.71 | 46.13 | 26.75 | 27.33 | 19.83 | 19.54 | 14.67 | 14.32 | |
0.95 | 2.21 | 1.06 | 2.33 | 0.69 | 0.89 | 2.46 | 2.64 | 1.07 | 1.45 | 1.01 | 1.16 | 0.41 | 0.68 | 0.2 | 0.32 | 4.04 | 8.8 | 1.1 | 9.78 | 6.73 | 0.0 | 1.87 | 0.42 | 5.31 | 0.46 | 1.71 | 2.07 | 3.33 | 3.11 | 5.59 | 2.93 | |
1.24 | 2.13 | 0.93 | 1.32 | 0.8 | 0.38 | 0.79 | 1.69 | 1.91 | 2.64 | 1.63 | 1.08 | 1.22 | 2.18 | 1.91 | 0.73 | 0.45 | 0.49 | 0.79 | 2.88 | 1.15 | 0.28 | 0.32 | 0.34 | 0.94 | 0.9 | 1.87 | 1.1 | 0.23 | 0.23 | 0.28 | 0.24 | |
25.46 | 20.14 | 21.57 | 21.72 | 23.68 | 19.81 | 17.61 | 22.61 | 23.69 | 26.99 | 26.26 | 23.03 | 21.93 | 26.85 | 15.47 | 22.18 | 16.18 | 13.78 | 23.8 | 27.36 | 10.09 | 14.03 | 20.22 | 22.19 | 6.72 | 26.09 | 17.39 | 16.92 | 13.84 | 16.5 | 15.61 | 19.38 | |
21.27 | 19.67 | 23.03 | 21.86 | 23.42 | 25.89 | 27.12 | 25.91 | 20.76 | 22.87 | 25.4 | 19.31 | 17.12 | 19.13 | 27.29 | 22.21 | 16.75 | 15.48 | 24.47 | 17.46 | 3.91 | 23.17 | 21.45 | 21.82 | 10.08 | 26.11 | 24.81 | 21.19 | 19.3 | 19.55 | 15.82 | 16.74 | |
1.8 | 2.2 | 2.03 | 2.26 | 2.76 | 2.96 | 2.68 | 2.74 | 2.93 | 1.77 | 2.01 | 1.74 | 2.58 | 2.78 | 3.5 | 3.03 | 1.85 | 1.75 | 3.34 | 3.56 | 1.21 | 0.0 | 2.47 | 2.48 | 0.58 | 1.98 | 2.48 | 2.43 | 2.06 | 2.04 | 1.85 | 2.14 | |
10.88 | 9.18 | 9.51 | 9.63 | 7.36 | 7.78 | 7.88 | 11.19 | 9.69 | 12.24 | 12.3 | 11.96 | 0.4 | 0.47 | 5.8 | 0.9 | 8.32 | 8.3 | 3.45 | 8.21 | 1.96 | 9.68 | 2.57 | 1.73 | 5.49 | 9.65 | 7.21 | 10.56 | 7.41 | 7.97 | 8.02 | 8.92 | |
7.59 | 9.84 | 4.49 | 7.73 | 6.16 | 10.66 | 14.0 | 13.37 | 14.53 | 12.07 | 9.68 | 9.93 | 4.4 | 5.16 | 9.26 | 4.36 | 14.74 | 10.02 | 6.88 | 13.7 | 0.89 | 4.88 | 11.12 | 9.81 | 2.74 | 6.29 | 8.98 | 6.6 | 12.34 | 11.14 | 12.51 | 11.41 | |
7.51 | 6.75 | 6.46 | 6.6 | 6.41 | 7.69 | 8.35 | 8.93 | 7.9 | 7.45 | 7.99 | 6.8 | 5.61 | 3.87 | 4.64 | 5.31 | 4.05 | 1.56 | 4.87 | 3.07 | 1.37 | 0.84 | 4.38 | 5.12 | 2.44 | 8.48 | 10.85 | 8.52 | 3.82 | 3.5 | 10.48 | 5.35 | |
16.16 | 15.83 | 18.64 | 18.64 | 16.96 | 17.95 | 17.07 | 17.89 | 16.94 | 20.01 | 16.17 | 14.98 | 13.69 | 9.33 | 10.05 | 14.02 | 12.97 | 10.43 | 12.47 | 10.13 | 3.27 | 1.77 | 14.95 | 15.95 | 14.32 | 24.16 | 29.33 | 23.83 | 11.01 | 11.34 | 15.32 | 15.94 | |
22.76 | 23.33 | 29.69 | 23.21 | 30.64 | 25.25 | 22.27 | 23.41 | 23.93 | 22.79 | 26.87 | 23.5 | 23.21 | 27.27 | 27.94 | 25.65 | 17.87 | 12.11 | 23.47 | 21.82 | 4.14 | 11.12 | 27.8 | 24.28 | 13.28 | 28.44 | 17.5 | 17.95 | 17.43 | 17.83 | 13.88 | 14.57 | |
3.92 | 3.72 | 3.55 | 4.37 | 3.68 | 4.41 | 3.32 | 3.63 | 3.0 | 3.77 | 3.77 | 3.73 | 4.05 | 2.86 | 5.66 | 4.8 | 1.87 | 1.89 | 3.13 | 3.87 | 0.5 | 0.09 | 2.35 | 2.76 | 2.18 | 2.07 | 3.06 | 2.51 | 2.11 | 1.91 | 2.18 | 2.24 | |
1.14 | 0.88 | 1.11 | 1.05 | 0.72 | 2.0 | 3.7 | 3.24 | 2.37 | 2.85 | 1.32 | 1.72 | 0.78 | 0.58 | 2.26 | 1.17 | 1.87 | 1.7 | 2.32 | 2.58 | 0.65 | 0.72 | 1.44 | 1.4 | 1.37 | 1.95 | 4.49 | 4.14 | 2.53 | 3.23 | 3.22 | 2.49 | |
13.26 | 14.38 | 16.1 | 16.8 | 18.41 | 16.5 | 13.35 | 10.48 | 13.53 | 12.59 | 14.72 | 12.4 | 20.06 | 14.36 | 19.03 | 16.61 | 11.9 | 11.05 | 18.58 | 12.57 | 4.21 | 5.01 | 10.43 | 14.15 | 3.39 | 6.51 | 4.85 | 4.97 | 7.66 | 8.97 | 5.67 | 6.01 | |
3.02 | 4.22 | 3.3 | 4.98 | 6.33 | 5.84 | 5.21 | 6.39 | 6.69 | 5.44 | 5.65 | 3.54 | 5.49 | 2.78 | 12.68 | 5.83 | 3.45 | 3.73 | 7.32 | 2.69 | 0.07 | 0.63 | 4.62 | 5.43 | 2.34 | 7.31 | 7.87 | 8.27 | 3.88 | 5.3 | 3.21 | 3.95 | |
20.08 | 17.96 | 22.01 | 25.43 | 27.09 | 28.75 | 23.08 | 26.46 | 23.37 | 24.85 | 21.0 | 18.27 | 18.88 | 20.42 | 11.04 | 25.13 | 26.1 | 22.12 | 33.92 | 19.07 | 1.64 | 0.32 | 29.53 | 21.85 | 15.26 | 24.36 | 36.24 | 37.51 | 29.28 | 29.46 | 18.07 | 20.0 | |
14.38 | 16.56 | 17.44 | 17.54 | 19.67 | 19.22 | 19.19 | 19.97 | 19.63 | 17.36 | 15.89 | 14.54 | 9.6 | 13.99 | 11.82 | 13.56 | 16.95 | 11.77 | 17.27 | 15.56 | 6.13 | 2.63 | 16.94 | 14.32 | 8.41 | 12.34 | 20.92 | 21.59 | 15.28 | 15.66 | 8.55 | 7.93 | |
1.25 | 1.51 | 1.24 | 1.33 | 2.06 | 1.6 | 2.22 | 1.62 | 1.73 | 1.41 | 2.06 | 1.29 | 0.16 | 0.34 | 0.12 | 0.84 | 0.81 | 0.94 | 3.59 | 1.77 | 0.0 | 0.07 | 3.2 | 3.28 | 3.56 | 1.15 | 1.76 | 1.86 | 1.55 | 1.1 | 0.78 | 0.7 | |
15.5 | 19.7 | 18.03 | 24.08 | 27.63 | 28.46 | 22.59 | 19.82 | 22.47 | 20.92 | 20.58 | 16.53 | 14.36 | 19.83 | 30.88 | 28.29 | 14.52 | 9.48 | 16.91 | 12.53 | 1.31 | 0.63 | 25.09 | 18.06 | 2.14 | 13.92 | 11.36 | 13.37 | 12.55 | 13.75 | 12.18 | 12.23 | |
9.18 | 11.45 | 7.33 | 11.45 | 15.8 | 15.6 | 12.05 | 14.47 | 16.31 | 14.02 | 11.59 | 10.96 | 10.94 | 12.94 | 13.58 | 13.23 | 11.93 | 8.76 | 9.38 | 12.31 | 8.79 | 5.52 | 14.64 | 12.37 | 10.49 | 5.67 | 10.3 | 11.3 | 10.04 | 10.95 | 6.83 | 6.28 | |
1.46 | 0.85 | 4.3 | 3.11 | 1.75 | 2.55 | 1.94 | 1.64 | 0.75 | 0.94 | 0.82 | 1.18 | 2.96 | 1.14 | 0.13 | 2.69 | 5.14 | 1.25 | 4.61 | 8.85 | 0.0 | 0.0 | 5.99 | 2.87 | 2.18 | 4.61 | 4.21 | 2.44 | 4.32 | 2.44 | 6.64 | 2.77 | |
66.69 | 46.72 | 62.63 | 45.83 | 39.85 | 43.95 | 49.28 | 67.24 | 70.05 | 61.91 | 89.42 | 114.34 | 47.1 | 29.67 | 36.49 | 43.54 | 54.0 | 77.76 | 60.86 | 79.47 | 78.05 | 26.18 | 52.67 | 49.98 | 137.35 | 109.66 | 138.95 | 126.3 | 83.16 | 87.3 | 87.2 | 86.06 | |
24.23 | 27.39 | 23.34 | 26.68 | 23.25 | 24.91 | 24.65 | 24.04 | 24.16 | 24.82 | 22.84 | 22.69 | 24.76 | 18.98 | 28.45 | 27.15 | 17.58 | 11.39 | 27.42 | 20.21 | 6.16 | 6.95 | 20.35 | 22.65 | 10.49 | 22.16 | 25.94 | 24.51 | 18.12 | 18.76 | 19.5 | 17.39 | |
14.9 | 15.84 | 11.97 | 13.8 | 11.27 | 9.04 | 13.18 | 8.06 | 13.09 | 14.51 | 11.83 | 12.77 | 0.57 | 0.47 | 3.47 | 0.63 | 13.03 | 7.54 | 11.75 | 16.06 | 3.27 | 0.58 | 4.13 | 2.48 | 10.27 | 8.36 | 5.11 | 5.75 | 12.07 | 11.61 | 15.24 | 15.35 | |
16.54 | 17.37 | 14.94 | 17.84 | 20.33 | 21.9 | 16.32 | 15.42 | 16.47 | 17.9 | 14.57 | 14.65 | 17.86 | 13.8 | 18.03 | 19.56 | 14.26 | 8.75 | 17.19 | 8.31 | 3.34 | 5.42 | 16.11 | 15.39 | 9.2 | 10.12 | 12.42 | 14.08 | 13.64 | 13.55 | 12.07 | 11.87 | |
213.37 | 196.48 | 177.4 | 173.65 | 182.71 | 204.1 | 189.26 | 188.55 | 210.39 | 221.84 | 221.24 | 199.2 | 395.54 | 291.32 | 273.99 | 331.29 | 165.62 | 312.85 | 241.84 | 245.89 | 49.06 | 75.79 | 312.42 | 321.59 | 93.92 | 253.18 | 161.53 | 140.45 | 186.07 | 181.88 | 204.59 | 251.43 |
Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)