Heatmap: Cluster_112 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
1.39 2.35 0.73 1.13 1.81 2.77 3.65 2.19 2.03 2.98 1.36 1.32 0.76 0.6 2.15 0.66 1.77 1.19 1.68 2.2 0.0 0.0 1.96 1.25 2.29 1.16 6.28 4.15 3.59 2.72 2.03 1.53
0.97 1.21 1.27 3.07 4.37 4.25 1.91 1.55 1.89 1.07 1.28 0.92 0.92 0.69 0.77 5.53 4.49 1.61 2.83 3.16 0.5 0.18 2.84 2.1 1.16 3.72 1.6 2.75 2.18 2.34 1.69 0.48
13.59 11.32 10.14 12.05 12.55 12.44 12.33 12.49 11.9 13.81 12.92 13.36 8.33 8.31 11.39 9.8 8.23 4.91 12.82 6.04 0.0 2.71 8.92 9.14 5.48 12.88 14.13 12.79 9.24 9.25 8.9 11.45
40.63 45.94 47.2 56.78 58.65 56.6 66.64 59.8 67.65 59.8 50.53 46.49 54.18 40.17 95.7 54.31 45.16 41.08 59.14 30.4 0.4 11.16 53.34 50.65 3.28 62.53 66.81 63.25 54.66 51.84 47.11 45.55
2.0 0.79 1.22 1.22 2.99 3.01 4.35 4.18 4.59 3.43 4.55 2.73 0.88 0.41 3.13 0.75 3.28 1.63 3.26 5.35 4.97 1.25 2.81 2.06 3.6 3.4 3.67 1.49 4.82 5.67 3.55 3.59
15.37 14.78 14.11 15.2 14.08 15.82 14.55 14.69 16.01 15.31 15.33 14.45 14.22 18.86 24.59 16.28 11.79 10.33 11.6 15.93 4.95 2.85 12.49 13.13 3.88 8.61 7.99 9.79 11.53 12.71 9.22 9.16
28.14 20.21 15.62 20.25 23.3 30.03 40.1 32.2 34.95 34.41 23.41 25.23 9.11 5.96 16.76 13.59 26.88 23.87 40.64 38.6 2.4 0.47 23.95 20.06 1.94 8.36 13.35 12.65 44.97 44.56 53.1 41.16
1.11 1.41 1.5 1.41 1.52 1.5 2.1 1.72 1.53 1.67 1.03 0.75 1.18 0.8 2.75 1.09 0.57 0.21 1.66 2.05 0.48 0.79 0.65 0.69 0.69 1.49 1.43 1.37 0.79 0.81 1.35 1.33
9.12 4.95 2.63 3.38 4.06 6.7 7.14 8.85 7.64 8.15 6.64 8.47 1.25 1.0 3.35 1.94 4.3 5.22 3.92 7.15 2.21 6.16 3.24 2.6 1.14 4.09 8.01 9.72 7.96 8.27 11.55 7.87
2.95 1.78 1.66 2.18 1.92 2.0 1.2 1.34 1.29 2.46 1.26 2.43 0.52 1.24 0.36 2.0 1.65 2.75 6.96 4.79 0.0 0.0 2.29 3.13 1.9 2.96 2.33 2.52 1.76 2.5 3.63 4.59
77.76 78.43 74.65 76.38 74.36 76.39 66.56 70.8 79.09 76.83 72.25 76.28 62.87 75.69 77.9 93.88 48.29 33.08 79.91 48.75 34.15 50.07 54.27 61.26 32.91 54.69 59.69 64.37 56.22 62.66 45.12 46.44
21.18 18.5 20.0 21.98 21.51 21.52 21.26 25.22 24.62 24.45 22.6 22.84 26.69 13.77 22.33 24.93 13.73 7.35 24.19 17.15 2.77 3.3 16.77 17.97 7.07 30.52 22.13 23.87 15.23 15.7 15.51 15.55
0.62 0.86 0.55 0.98 0.57 1.26 1.3 1.18 1.2 0.92 0.68 0.62 0.06 0.05 0.19 0.35 1.73 0.76 3.1 2.34 0.14 1.03 0.68 0.41 1.05 1.89 3.36 4.8 2.27 2.49 0.53 0.28
8.65 11.65 13.05 12.55 15.0 12.66 12.07 11.27 14.21 10.88 10.85 8.93 8.59 11.39 14.37 11.07 7.78 4.76 5.75 11.91 1.94 4.35 15.07 14.48 5.15 6.22 6.45 8.73 6.03 7.96 4.63 4.94
1.74 2.73 3.22 3.36 2.88 2.74 2.6 2.59 1.99 2.24 2.42 1.81 0.86 0.32 0.67 0.3 2.13 1.23 1.99 1.35 0.45 0.83 2.25 1.96 0.35 1.95 2.32 2.61 1.8 1.79 1.0 0.78
68.07 61.06 79.61 61.58 85.19 68.12 70.97 61.63 73.91 92.51 95.49 72.74 205.79 29.61 76.32 138.54 51.97 160.06 38.81 85.8 5.06 26.77 231.01 165.45 4.9 74.59 32.67 26.84 59.26 61.65 63.59 64.12
643.23 644.47 483.26 608.98 720.89 693.71 620.21 634.24 786.57 781.42 574.06 685.41 1366.74 706.1 171.67 1015.71 727.31 969.48 853.64 926.04 44.69 6.32 1011.34 994.09 191.74 999.24 772.1 866.73 970.53 852.17 580.71 727.81
274.8 238.86 284.79 289.71 239.8 242.59 215.47 244.91 362.68 237.98 232.25 262.7 362.06 338.31 243.91 514.31 320.29 431.16 401.09 339.87 80.98 184.75 565.31 611.03 93.37 177.4 103.78 113.64 352.59 340.87 326.11 344.52
13.04 12.01 11.6 11.58 10.83 11.1 11.57 10.16 9.97 12.09 11.44 10.83 24.05 2.73 6.99 12.52 9.73 5.97 12.13 21.88 5.11 3.59 14.75 14.22 9.04 20.13 15.88 18.19 10.7 10.58 8.83 7.52
3.44 2.91 3.44 4.1 4.9 3.58 4.07 4.77 3.04 3.33 2.74 2.72 2.63 2.23 2.63 4.77 2.58 1.32 7.69 4.65 0.23 0.11 5.13 5.06 2.71 3.93 4.46 4.21 4.3 4.34 3.55 3.06
3.5 3.42 2.06 1.79 2.22 4.04 5.84 6.74 6.95 4.31 4.59 4.93 1.86 0.89 2.74 2.74 6.79 11.7 5.59 10.75 9.24 0.18 6.86 6.01 9.64 5.27 9.85 8.57 8.39 10.35 9.02 8.73
33.92 25.9 21.12 33.76 29.58 33.44 29.95 41.45 46.68 37.27 36.25 35.32 52.74 43.12 44.09 41.8 34.33 44.97 38.74 25.69 8.4 5.63 35.03 42.1 9.09 21.6 23.84 23.19 45.14 42.46 58.73 59.53
5.77 6.05 6.62 7.59 9.63 7.78 6.32 7.2 7.65 6.71 6.52 5.55 7.09 5.59 9.65 8.49 5.75 3.36 9.11 7.74 0.91 0.48 6.92 7.07 1.28 9.15 7.8 8.75 6.48 6.15 4.2 4.87
10.98 12.64 12.97 13.02 16.86 13.33 14.74 14.71 15.73 15.46 18.97 16.15 17.66 15.43 30.83 15.5 9.85 12.95 17.91 8.26 4.69 0.0 13.79 18.68 7.13 24.62 21.23 20.03 10.81 12.65 7.25 13.84
21.97 22.27 19.76 26.24 25.82 26.43 28.18 31.51 28.94 29.6 27.41 28.16 26.52 20.06 31.32 30.39 15.14 9.17 25.44 11.07 8.62 13.63 20.8 24.38 22.71 46.13 26.75 27.33 19.83 19.54 14.67 14.32
0.95 2.21 1.06 2.33 0.69 0.89 2.46 2.64 1.07 1.45 1.01 1.16 0.41 0.68 0.2 0.32 4.04 8.8 1.1 9.78 6.73 0.0 1.87 0.42 5.31 0.46 1.71 2.07 3.33 3.11 5.59 2.93
1.24 2.13 0.93 1.32 0.8 0.38 0.79 1.69 1.91 2.64 1.63 1.08 1.22 2.18 1.91 0.73 0.45 0.49 0.79 2.88 1.15 0.28 0.32 0.34 0.94 0.9 1.87 1.1 0.23 0.23 0.28 0.24
25.46 20.14 21.57 21.72 23.68 19.81 17.61 22.61 23.69 26.99 26.26 23.03 21.93 26.85 15.47 22.18 16.18 13.78 23.8 27.36 10.09 14.03 20.22 22.19 6.72 26.09 17.39 16.92 13.84 16.5 15.61 19.38
21.27 19.67 23.03 21.86 23.42 25.89 27.12 25.91 20.76 22.87 25.4 19.31 17.12 19.13 27.29 22.21 16.75 15.48 24.47 17.46 3.91 23.17 21.45 21.82 10.08 26.11 24.81 21.19 19.3 19.55 15.82 16.74
1.8 2.2 2.03 2.26 2.76 2.96 2.68 2.74 2.93 1.77 2.01 1.74 2.58 2.78 3.5 3.03 1.85 1.75 3.34 3.56 1.21 0.0 2.47 2.48 0.58 1.98 2.48 2.43 2.06 2.04 1.85 2.14
10.88 9.18 9.51 9.63 7.36 7.78 7.88 11.19 9.69 12.24 12.3 11.96 0.4 0.47 5.8 0.9 8.32 8.3 3.45 8.21 1.96 9.68 2.57 1.73 5.49 9.65 7.21 10.56 7.41 7.97 8.02 8.92
7.59 9.84 4.49 7.73 6.16 10.66 14.0 13.37 14.53 12.07 9.68 9.93 4.4 5.16 9.26 4.36 14.74 10.02 6.88 13.7 0.89 4.88 11.12 9.81 2.74 6.29 8.98 6.6 12.34 11.14 12.51 11.41
7.51 6.75 6.46 6.6 6.41 7.69 8.35 8.93 7.9 7.45 7.99 6.8 5.61 3.87 4.64 5.31 4.05 1.56 4.87 3.07 1.37 0.84 4.38 5.12 2.44 8.48 10.85 8.52 3.82 3.5 10.48 5.35
16.16 15.83 18.64 18.64 16.96 17.95 17.07 17.89 16.94 20.01 16.17 14.98 13.69 9.33 10.05 14.02 12.97 10.43 12.47 10.13 3.27 1.77 14.95 15.95 14.32 24.16 29.33 23.83 11.01 11.34 15.32 15.94
22.76 23.33 29.69 23.21 30.64 25.25 22.27 23.41 23.93 22.79 26.87 23.5 23.21 27.27 27.94 25.65 17.87 12.11 23.47 21.82 4.14 11.12 27.8 24.28 13.28 28.44 17.5 17.95 17.43 17.83 13.88 14.57
3.92 3.72 3.55 4.37 3.68 4.41 3.32 3.63 3.0 3.77 3.77 3.73 4.05 2.86 5.66 4.8 1.87 1.89 3.13 3.87 0.5 0.09 2.35 2.76 2.18 2.07 3.06 2.51 2.11 1.91 2.18 2.24
1.14 0.88 1.11 1.05 0.72 2.0 3.7 3.24 2.37 2.85 1.32 1.72 0.78 0.58 2.26 1.17 1.87 1.7 2.32 2.58 0.65 0.72 1.44 1.4 1.37 1.95 4.49 4.14 2.53 3.23 3.22 2.49
13.26 14.38 16.1 16.8 18.41 16.5 13.35 10.48 13.53 12.59 14.72 12.4 20.06 14.36 19.03 16.61 11.9 11.05 18.58 12.57 4.21 5.01 10.43 14.15 3.39 6.51 4.85 4.97 7.66 8.97 5.67 6.01
3.02 4.22 3.3 4.98 6.33 5.84 5.21 6.39 6.69 5.44 5.65 3.54 5.49 2.78 12.68 5.83 3.45 3.73 7.32 2.69 0.07 0.63 4.62 5.43 2.34 7.31 7.87 8.27 3.88 5.3 3.21 3.95
20.08 17.96 22.01 25.43 27.09 28.75 23.08 26.46 23.37 24.85 21.0 18.27 18.88 20.42 11.04 25.13 26.1 22.12 33.92 19.07 1.64 0.32 29.53 21.85 15.26 24.36 36.24 37.51 29.28 29.46 18.07 20.0
14.38 16.56 17.44 17.54 19.67 19.22 19.19 19.97 19.63 17.36 15.89 14.54 9.6 13.99 11.82 13.56 16.95 11.77 17.27 15.56 6.13 2.63 16.94 14.32 8.41 12.34 20.92 21.59 15.28 15.66 8.55 7.93
1.25 1.51 1.24 1.33 2.06 1.6 2.22 1.62 1.73 1.41 2.06 1.29 0.16 0.34 0.12 0.84 0.81 0.94 3.59 1.77 0.0 0.07 3.2 3.28 3.56 1.15 1.76 1.86 1.55 1.1 0.78 0.7
15.5 19.7 18.03 24.08 27.63 28.46 22.59 19.82 22.47 20.92 20.58 16.53 14.36 19.83 30.88 28.29 14.52 9.48 16.91 12.53 1.31 0.63 25.09 18.06 2.14 13.92 11.36 13.37 12.55 13.75 12.18 12.23
9.18 11.45 7.33 11.45 15.8 15.6 12.05 14.47 16.31 14.02 11.59 10.96 10.94 12.94 13.58 13.23 11.93 8.76 9.38 12.31 8.79 5.52 14.64 12.37 10.49 5.67 10.3 11.3 10.04 10.95 6.83 6.28
1.46 0.85 4.3 3.11 1.75 2.55 1.94 1.64 0.75 0.94 0.82 1.18 2.96 1.14 0.13 2.69 5.14 1.25 4.61 8.85 0.0 0.0 5.99 2.87 2.18 4.61 4.21 2.44 4.32 2.44 6.64 2.77
66.69 46.72 62.63 45.83 39.85 43.95 49.28 67.24 70.05 61.91 89.42 114.34 47.1 29.67 36.49 43.54 54.0 77.76 60.86 79.47 78.05 26.18 52.67 49.98 137.35 109.66 138.95 126.3 83.16 87.3 87.2 86.06
24.23 27.39 23.34 26.68 23.25 24.91 24.65 24.04 24.16 24.82 22.84 22.69 24.76 18.98 28.45 27.15 17.58 11.39 27.42 20.21 6.16 6.95 20.35 22.65 10.49 22.16 25.94 24.51 18.12 18.76 19.5 17.39
14.9 15.84 11.97 13.8 11.27 9.04 13.18 8.06 13.09 14.51 11.83 12.77 0.57 0.47 3.47 0.63 13.03 7.54 11.75 16.06 3.27 0.58 4.13 2.48 10.27 8.36 5.11 5.75 12.07 11.61 15.24 15.35
16.54 17.37 14.94 17.84 20.33 21.9 16.32 15.42 16.47 17.9 14.57 14.65 17.86 13.8 18.03 19.56 14.26 8.75 17.19 8.31 3.34 5.42 16.11 15.39 9.2 10.12 12.42 14.08 13.64 13.55 12.07 11.87
213.37 196.48 177.4 173.65 182.71 204.1 189.26 188.55 210.39 221.84 221.24 199.2 395.54 291.32 273.99 331.29 165.62 312.85 241.84 245.89 49.06 75.79 312.42 321.59 93.92 253.18 161.53 140.45 186.07 181.88 204.59 251.43

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)