Heatmap: Cluster_103 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Aerial tissue - Light - ZT1	Aerial tissue - Light - ZT3	Aerial tissue - Light - ZT5	Aerial tissue - Light - ZT7	Aerial tissue - Light - ZT9	Aerial tissue - Light - ZT11	Aerial tissue - Dark - ZT1	Aerial tissue - Dark - ZT3	Aerial tissue - Dark - ZT5	Aerial tissue - Dark - ZT7	Aerial tissue - Dark - ZT9	Aerial tissue - Dark - ZT11	Roots	Root elongation and differentiation zone	Root meristematic zone	Aerial roots and rhizophores	Shoot tips	Microphyll	Strobili	Shoot apical meristem - AC	Shoot apical meristem - Core	Shoot apical meristem - P1	Stem - Top	Stem - Bottom	Whole plant	Aerial tissue - Stress - Dark	Aerial tissue - Stress - High light	Aerial tissue - Stress - Cont	Aerial tissue - Stress - 37C 1h	Aerial tissue - Stress - 37C 3h	Aerial tissue - Stress - 4C 1h	Aerial tissue - Stress - 4C 3h
Smo10629	-0.43	-1.43	-1.25	-1.46	0.43	0.58	0.69	1.03	0.89	0.78	0.57	0.1	-2.19	-2.93	-0.78	-1.4	-0.75	-1.0	-0.49	-1.66	-3.42	-0.71	-0.51	-0.59	1.54	0.34	0.91	1.14	0.2	0.47	-0.5	-1.09
Smo107247	-2.3	-1.81	-0.97	-0.19	0.51	0.81	0.93	0.76	0.17	-0.54	-1.37	-2.11	-1.75	-1.92	0.59	-1.53	-0.42	-0.64	-0.82	0.51	0.63	0.09	-0.3	-0.59	2.25	-0.3	0.83	0.72	-0.94	-0.8	-1.25	-0.89
Smo107717	-0.28	-0.35	0.28	0.09	0.49	0.37	0.63	0.74	0.62	0.52	0.21	-0.06	-1.22	-1.12	-0.7	-0.81	-0.2	-0.25	-0.82	-0.79	-0.06	-0.28	-0.39	-0.63	0.95	-0.26	0.79	0.99	-0.11	-0.2	-1.44	-1.59
Smo110274	-0.19	-0.09	0.03	0.15	0.23	0.27	0.26	0.61	0.36	0.17	-0.11	-0.08	-0.66	-1.19	-0.28	0.03	-0.26	-0.44	0.02	-1.14	-0.89	-1.56	-0.14	-0.2	1.37	0.46	0.7	0.88	-0.05	-0.13	-1.11	-1.79
Smo111571	-3.91	-1.99	-0.73	0.58	1.3	1.49	0.95	-0.16	-1.77	-2.62	-3.47	-3.91	-1.8	-1.48	-1.21	-1.16	0.52	0.21	-0.4	-1.96	-0.13	-2.58	1.08	0.22	2.39	-1.21	1.0	1.15	-1.24	-1.04	-2.38	-1.4
Smo113024	-1.95	-0.89	-0.24	0.31	0.79	0.84	0.76	0.48	-0.25	-0.93	-1.48	-1.85	-1.92	-1.98	-0.05	-1.7	-0.11	-0.68	-0.99	0.61	0.37	0.56	-0.31	-0.61	2.05	-0.52	1.14	1.01	-1.28	-1.13	-1.31	-0.82
Smo113089	-2.38	-1.68	-0.66	0.09	0.84	1.13	1.11	0.82	-0.2	-1.01	-1.69	-2.26	-2.36	-2.27	-1.87	-1.74	0.45	0.14	-0.58	-0.9	0.95	-0.81	-0.02	-0.34	2.1	-0.9	0.86	0.84	-0.3	-0.35	-0.81	-1.01
Smo122461	-0.02	0.05	-0.45	-0.06	-0.5	-0.01	-0.0	0.22	0.1	0.39	0.16	0.31	-1.01	-1.43	-0.98	-0.88	-0.26	-0.3	-0.51	-0.85	-0.69	-0.59	-0.62	-0.96	1.52	0.59	1.39	1.37	-0.3	-0.37	-0.65	-0.73
Smo123396	-0.25	0.32	0.5	0.51	0.54	0.48	0.5	0.08	0.06	0.18	0.04	-0.07	0.06	-1.74	-1.0	-0.5	0.03	-0.61	0.0	-1.23	-0.96	-3.05	0.17	-0.05	1.64	-0.4	0.28	0.43	-0.05	-0.12	-1.1	-1.21
Smo130536	-0.88	-0.43	-0.14	-0.07	0.27	0.6	0.44	0.46	-0.13	-0.24	-0.54	-0.68	-0.63	-1.28	-1.16	-0.52	0.17	-0.52	-0.47	-0.38	0.83	0.0	-0.26	-0.54	1.21	0.35	0.62	0.84	-0.16	-0.24	-0.07	-0.14
Smo136794	-0.3	-0.08	-0.27	0.27	0.4	0.53	0.62	0.63	0.43	0.13	-0.05	-0.11	-1.76	-0.79	-0.05	-1.11	0.02	-0.72	-0.43	-0.5	-0.74	0.13	-0.66	-0.7	0.76	-0.64	1.03	1.14	-0.03	0.17	-0.68	-1.31
Smo144094	-0.37	0.05	-0.02	0.23	0.41	0.59	0.12	0.4	-0.21	-0.36	-0.52	-0.45	-0.45	-0.43	-0.13	0.04	-0.34	-0.72	0.35	-0.09	-1.65	-2.61	-0.3	-0.21	1.55	0.45	0.78	0.84	-0.43	-0.47	-0.58	-0.73
Smo163486	-0.24	0.22	0.18	0.36	0.54	0.35	0.02	0.02	-0.33	-0.66	-0.72	-0.78	-1.65	-2.41	-3.16	-1.1	0.34	-0.22	-0.16	-2.26	-0.21	-2.97	0.22	0.05	2.0	0.4	1.19	1.24	-0.26	-0.27	-0.86	-0.96
Smo173486	-1.34	0.16	0.73	0.93	0.88	0.75	0.62	0.34	-0.33	-0.66	-1.07	-1.25	-2.32	-1.71	-1.1	-1.81	0.11	-1.57	0.35	-0.0	0.76	-2.05	-0.12	-0.46	2.23	-0.53	-0.38	-0.65	0.02	-0.11	-0.97	-0.97
Smo174583	-0.71	-0.58	-0.22	0.43	0.71	0.96	0.9	0.91	0.49	0.09	-0.42	-0.55	-2.45	-2.09	-1.67	-2.36	-0.59	-0.67	-1.62	-2.06	0.86	-0.57	-1.01	-1.35	2.09	-0.63	0.93	0.69	-0.77	-0.79	-0.61	-0.17
Smo175611	-0.56	0.44	0.68	0.62	0.64	0.1	0.07	0.35	0.09	0.26	-0.29	-0.48	-0.93	-1.41	-6.78	-0.95	-0.93	-2.33	-0.71	-2.15	-0.88	-	-1.07	-1.44	2.34	1.21	1.36	0.94	-0.65	-0.72	-1.39	-2.34
Smo185793	-0.88	-0.17	0.04	0.26	0.65	0.72	0.32	0.26	-0.18	-0.32	-0.63	-0.78	-0.71	-1.28	-0.4	-0.76	-0.26	-1.07	-0.34	-0.66	0.03	0.64	-0.38	-0.27	1.52	-0.25	1.0	1.19	-0.33	-0.27	-1.2	-1.15
Smo19373	-0.82	-0.63	0.06	0.47	0.83	0.72	0.18	0.34	-0.27	-0.47	-0.59	-0.96	-0.54	-1.42	-2.5	-0.44	-0.2	-0.14	-0.33	-1.46	0.31	-2.25	-0.37	-0.76	1.86	0.63	0.95	1.07	-0.47	-0.61	-0.38	-0.45
Smo229229	-1.32	-1.09	-0.66	0.15	0.95	1.22	0.94	0.33	-0.19	-0.9	-1.12	-1.4	-1.8	-1.37	0.15	-1.59	-0.04	-0.81	-0.96	0.66	0.84	1.02	-0.69	-1.14	1.76	-0.59	0.94	0.68	-1.22	-1.3	-1.55	-1.68
Smo233821	0.1	0.08	0.13	0.01	0.12	0.3	0.08	0.05	-0.14	-0.2	-0.3	-0.32	-0.82	-0.55	-0.15	-0.66	0.31	0.31	-0.1	-3.11	-1.45	-2.21	-0.47	-0.55	1.51	-0.21	0.99	0.95	-0.17	-0.24	0.06	0.33
Smo25552	-1.28	-0.77	-0.07	0.48	0.87	1.14	0.94	0.74	0.13	-0.46	-0.85	-1.22	-1.74	-1.91	-1.65	-1.41	0.73	0.11	-0.32	-1.45	0.02	-0.48	0.17	-0.17	1.42	-1.43	0.48	0.39	-0.13	-0.22	-0.16	-0.12
Smo270747	-0.43	-0.11	0.14	0.63	0.78	1.0	0.87	0.77	0.4	-0.16	-0.29	-0.45	-2.53	-1.42	-1.61	-1.98	-0.06	-0.77	-0.53	-1.01	0.72	-1.72	-0.44	-0.82	1.53	-1.1	0.59	0.79	-0.21	-0.22	-0.69	-0.7
Smo402758	-0.58	-0.09	0.46	0.02	0.3	-0.09	0.47	0.33	0.54	-0.06	-0.68	-0.36	-2.35	-3.06	0.11	-2.05	0.28	-1.67	0.3	-0.31	-2.79	-0.23	-0.06	-0.98	2.03	-0.18	0.24	0.62	0.38	0.71	-0.52	-1.45
Smo404114	-4.07	-3.81	-5.3	-2.09	0.52	1.64	0.74	-0.81	-1.59	-2.23	-3.03	-4.14	-6.11	-5.97	-4.39	-4.44	-0.45	-1.42	-0.88	-0.1	1.35	-1.77	-0.32	-1.19	2.46	-2.13	2.45	2.51	-3.0	-2.81	-3.68	-3.58
Smo404844	-0.76	-0.54	-0.88	-0.37	-0.07	0.21	0.45	0.52	0.23	0.16	-0.38	-0.59	-3.74	-3.84	-3.02	-2.43	-0.03	-2.85	0.44	-1.66	-1.83	-2.31	0.58	0.37	2.38	-0.46	0.96	0.78	0.22	0.21	0.1	0.34
Smo405119	-0.26	-0.8	-0.91	-0.83	0.53	-0.23	0.62	0.94	0.85	0.47	0.89	0.25	-4.07	-2.96	-1.34	-3.21	-0.85	-0.33	-1.11	-4.17	-1.3	-0.82	-1.3	-1.62	1.51	0.74	1.57	1.26	-0.42	-0.28	0.02	-0.34
Smo407038	-1.14	-0.73	-0.22	0.56	1.09	1.08	0.02	-0.56	-1.35	-1.63	-1.59	-1.78	-6.36	-2.87	-5.45	-3.53	-0.04	-1.09	0.27	-2.87	0.02	-7.15	0.58	-0.14	1.9	0.57	2.01	1.78	-0.63	-0.66	-1.0	-1.29
Smo409075	-2.18	-1.44	-0.73	-0.02	0.62	1.29	0.96	0.28	-1.11	-1.27	-1.49	-2.03	-1.29	-1.15	0.5	-0.43	-0.52	-2.65	-0.59	0.59	1.06	1.56	-0.83	-1.37	1.57	-0.2	0.98	0.99	-1.55	-1.66	-1.19	-1.82
Smo409890	-2.65	-1.1	-0.5	0.37	1.0	1.01	0.5	-0.16	-0.59	-1.47	-1.71	-2.85	-0.87	0.25	-3.39	-0.55	-0.28	-0.7	-0.47	-2.62	0.18	-7.71	0.98	0.71	1.88	-1.13	1.51	1.59	-0.99	-0.6	-1.62	-1.02
Smo412307	-0.14	-0.01	-0.31	0.19	0.44	0.32	0.44	0.93	0.52	0.26	0.2	0.32	-3.24	-1.51	-1.35	-2.44	-0.05	-0.36	-0.66	-2.62	-0.63	-0.99	-0.63	-1.1	1.9	-0.77	0.94	0.8	-0.15	0.01	-0.29	-0.51
Smo412580	-0.12	0.36	0.24	0.28	1.14	0.87	0.54	0.31	0.07	-0.43	-0.14	-0.72	-1.98	-2.26	-2.79	-2.13	-1.0	-0.74	-1.42	-1.54	-0.16	-2.76	-0.81	-0.86	2.31	-0.03	0.85	1.65	-0.99	-0.96	-1.51	-1.65
Smo416226	-0.16	-1.4	-0.98	-0.95	-0.07	0.31	-0.32	-0.49	-0.32	0.48	0.18	-0.05	-0.59	-1.89	-1.03	-0.55	-0.21	-0.12	0.28	-	-0.83	-1.27	-0.12	0.06	2.12	1.09	0.85	1.03	0.22	0.18	-0.72	-1.21
Smo423176	0.23	-0.1	-0.34	-0.31	0.11	0.35	0.27	0.57	0.37	0.46	0.07	0.2	-1.03	-1.24	-0.37	-0.61	-0.69	-1.02	0.12	-3.2	-0.45	-0.34	-0.45	-0.64	1.8	0.14	0.77	0.35	-0.18	-0.18	-0.42	-0.41
Smo423936	-0.0	0.32	0.35	0.43	0.52	0.65	0.38	0.37	0.2	0.07	-0.05	-0.18	-1.73	-2.76	0.03	-1.84	0.25	-0.36	-0.14	-0.53	-0.64	-0.49	-0.42	-0.96	0.37	0.24	0.9	1.07	-0.11	-0.09	-0.72	-0.65
Smo424815	-0.34	0.17	0.48	0.58	0.97	1.09	0.7	0.6	0.26	-0.15	-0.41	-0.22	-3.14	-3.53	-3.78	-1.97	-0.75	-1.75	-1.26	0.37	0.6	-0.86	-0.74	-0.76	1.75	-0.05	0.81	0.86	-0.99	-0.79	-1.2	-1.11
Smo427594	-1.19	-0.04	-0.29	-0.19	-1.08	-1.0	0.28	0.34	0.42	0.45	0.07	0.11	-1.53	-3.95	-	-2.07	-0.32	-1.57	-0.15	-1.22	-0.06	-	-0.22	-0.22	2.87	-0.33	0.25	0.54	0.77	0.07	-0.21	-1.21
Smo437618	-0.18	0.02	0.31	0.2	0.6	0.54	0.56	0.59	0.45	0.08	0.14	-0.1	-1.44	-1.11	-0.79	-0.61	0.11	-0.61	-0.35	-1.1	-0.57	-1.16	-0.4	-0.66	1.16	0.07	0.76	0.86	-0.07	-0.05	-0.65	-1.31
Smo438157	-0.58	-0.08	0.32	0.08	0.1	0.1	0.34	0.15	0.38	0.24	-0.13	-0.14	-1.95	-0.77	-0.9	-0.63	0.52	-3.01	-0.26	-1.45	-0.36	0.22	-0.06	-0.58	1.95	0.54	0.4	0.95	-0.27	-0.23	-1.34	-1.95
Smo438187	-4.26	-4.04	-4.35	-2.03	0.72	1.86	1.58	0.48	-1.0	-2.04	-3.28	-4.18	-6.93	-7.55	-7.0	-5.44	-0.26	0.29	-0.45	0.17	1.36	-4.13	0.14	-0.82	2.75	-4.47	1.07	0.82	-0.65	-0.44	-1.25	-1.73
Smo438482	-0.86	-0.3	-0.01	0.57	0.83	0.86	0.59	0.38	0.02	-0.46	-0.83	-1.09	-0.93	-1.06	-1.61	-0.92	-0.33	-1.1	-0.37	-0.29	0.44	-1.59	-0.47	-0.8	1.96	0.52	0.79	0.84	-0.7	-0.66	-0.8	-0.69
Smo438899	0.17	0.42	0.41	0.46	0.55	0.53	-0.08	-0.11	-0.2	-0.27	-0.39	-0.3	-0.56	-0.32	-1.64	-0.63	-0.42	-0.44	-0.11	-1.28	-0.23	-0.95	-0.42	-0.67	1.61	0.46	1.1	0.85	-0.91	-0.87	-0.82	-0.43
Smo441792	-1.01	-0.36	0.25	0.71	0.94	0.92	0.77	0.61	0.24	0.0	-0.24	-0.33	-6.9	-4.19	-5.64	-3.14	0.03	-1.43	-1.01	-0.78	1.47	-3.2	-0.46	-1.14	2.26	-0.04	-0.13	0.11	-0.43	-0.53	-0.77	-0.92
Smo442874	0.03	-0.19	0.13	0.12	0.38	0.5	0.22	0.25	0.07	-0.1	-0.27	-0.45	-1.56	-0.8	0.15	-1.14	0.19	-0.08	-0.2	-0.77	-0.51	-0.04	-0.34	-0.35	0.85	-0.12	0.89	0.89	-0.2	-0.06	-0.06	-0.29
Smo447775	1.13	-0.31	-0.29	0.54	-0.97	0.29	0.69	1.21	0.41	1.14	0.64	0.64	-4.0	-	-5.38	-2.9	-1.09	0.37	-1.96	-1.98	-2.61	-2.66	-2.07	-2.54	2.15	-0.04	0.95	0.68	-0.99	-0.49	-0.83	-1.11
Smo448001	-5.48	-4.13	-3.64	-1.3	1.29	1.72	1.39	0.65	-1.12	-2.39	-3.64	-4.66	-2.99	-1.16	-1.45	-1.39	0.51	-0.5	0.22	-0.69	0.08	-1.06	0.62	-0.81	2.15	0.09	1.11	1.23	-1.4	-1.31	-1.33	-0.61
Smo47339	0.26	0.12	0.08	0.01	0.33	0.48	0.46	0.33	0.48	0.31	0.25	0.22	-1.36	-1.2	-0.74	-1.06	0.08	-0.01	0.0	-4.38	-1.24	-1.13	-0.63	-0.93	1.53	-0.26	0.45	0.69	0.1	0.09	-0.56	-0.33
Smo58377	-1.18	-0.94	-0.42	0.54	1.11	1.36	1.11	0.71	0.48	0.35	-0.59	-0.64	-1.51	-1.89	-3.21	-1.34	-0.07	-1.01	-0.73	-0.45	1.5	-0.9	-0.52	-0.74	1.94	-0.62	-0.95	-0.94	-0.37	-0.49	-1.24	-1.52
Smo66017	-0.12	0.36	0.15	0.33	0.2	0.4	0.19	0.36	0.39	0.47	0.12	0.18	-0.68	0.07	-1.11	-0.12	-0.28	-0.46	0.01	-1.65	-2.44	-1.58	0.19	0.12	1.12	0.03	0.67	0.65	0.0	-0.02	-1.98	-1.6
Smo71320	-0.41	-2.19	-0.69	-1.6	-0.0	-0.02	0.62	0.6	0.31	0.03	0.13	-0.7	-2.17	-4.66	-1.13	-2.25	-0.27	0.39	-0.79	-0.53	-0.64	-1.33	-0.56	-0.87	2.44	-0.9	0.95	0.89	0.35	0.69	0.13	-0.47
Smo76105	-0.37	-0.04	-0.07	0.09	0.17	0.1	0.21	0.31	0.07	-0.08	-0.14	-0.3	-0.72	-1.06	-0.23	-0.11	-0.24	-0.95	-0.01	-0.57	-1.02	-0.59	0.21	0.23	1.45	0.41	0.69	0.87	-0.05	0.08	-0.79	-1.08
Smo77953	-0.54	-0.21	-0.15	0.02	0.2	0.48	0.39	0.47	0.08	-0.21	-0.53	-0.52	-1.12	-1.27	-1.31	-1.31	-0.56	0.04	-0.1	-0.42	-0.13	-0.01	-0.7	-0.69	1.11	0.11	1.53	1.58	-0.56	-0.53	-0.84	-0.47
Smo81873	-2.91	-1.04	-0.04	1.13	1.44	1.52	1.06	0.62	-0.55	-0.73	-2.0	-2.4	-1.57	-2.58	-0.59	-1.12	0.02	-1.67	-0.53	-1.2	0.56	-0.83	-0.13	-0.85	2.3	0.2	0.42	0.56	-1.91	-1.68	-3.11	-3.28
Smo83268	-1.24	-0.82	-0.19	0.63	0.99	0.81	0.52	0.58	-0.09	-0.26	-0.53	-0.7	-1.71	-1.26	-1.57	-1.71	-0.9	-1.69	-0.83	-2.69	-1.06	-2.75	-0.77	-0.92	2.26	0.16	1.55	1.35	-0.67	-0.66	-0.68	-0.17
Smo85059	0.14	-0.28	-0.36	0.18	-0.02	0.39	0.2	0.12	0.17	-0.3	-0.61	-0.36	-1.85	-0.84	0.37	-1.66	0.54	0.39	-0.05	-6.31	-1.79	-1.37	-0.99	-1.34	1.78	0.42	1.34	0.83	0.12	-0.07	-0.4	-0.67
Smo89134	-0.52	-0.04	0.27	0.56	0.85	0.84	0.62	0.49	-0.21	-0.47	-0.55	-0.78	-1.38	-1.0	-1.8	-1.01	0.01	-0.65	-0.11	-1.02	0.8	-1.99	-0.47	-0.64	1.79	-0.44	0.41	0.41	-0.36	-0.3	-0.27	-0.17
Smo89832	-0.23	-0.01	0.07	0.08	-0.3	0.37	0.18	0.09	0.16	0.03	-0.32	-0.12	-2.58	-1.37	-0.14	-1.73	0.67	-1.74	0.05	-1.49	-2.93	-0.88	-1.09	-1.44	2.18	-0.74	1.13	1.47	-0.01	0.15	-0.75	-0.9
Smo97796	-0.37	-0.19	0.04	0.24	0.42	0.69	0.52	0.65	0.2	-0.01	-0.09	-0.47	-1.7	-1.08	-0.33	-0.69	0.11	-0.14	0.08	-2.13	0.26	-0.37	-0.42	-0.7	0.7	-0.13	1.16	0.98	-0.21	-0.19	-0.81	-0.88

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.