Heatmap: Cluster_25 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.12 -0.12 -0.31 -0.05 0.1 -0.11 0.15 0.03 0.15 0.16 0.22 0.04 -0.23 -0.04 -0.25 -0.39 -0.7 -0.5 -0.94 -4.07 -2.38 -4.52 -0.34 -0.32 -1.33 0.18 0.17 -0.52 -0.62 -0.64 2.39 1.49
-2.25 -1.59 -0.14 0.46 1.13 1.1 -0.06 -1.24 -2.01 -2.44 -3.93 -3.77 -2.94 -2.93 -2.13 -1.81 -0.16 -0.06 -0.49 - - - 0.93 0.92 - -1.35 1.38 1.4 -2.45 -2.08 2.92 1.11
-0.58 -0.82 -0.57 -0.45 -0.45 -0.53 -0.04 0.3 0.05 -0.0 -0.1 -0.38 -1.53 -1.78 -2.67 -0.35 -1.11 -0.63 -0.43 -2.47 -0.14 -1.75 -1.04 -0.4 0.38 1.06 1.45 0.94 -0.41 -0.47 1.67 1.7
-0.35 -0.43 -0.51 -0.38 -0.37 -0.4 -0.11 0.3 0.42 0.4 0.3 0.26 -0.23 0.28 -0.17 0.12 -1.17 -1.2 -0.38 -1.15 -0.53 -3.47 -0.51 -0.24 0.23 1.21 1.07 0.91 -0.41 -0.36 0.71 0.15
-0.22 -0.34 -0.5 -0.14 -0.15 -0.21 0.04 -0.04 -0.02 -0.15 -0.18 -0.23 0.0 0.39 -0.5 0.53 -0.53 -0.66 0.78 -4.34 -7.59 - -0.59 -0.19 -3.09 0.79 1.29 1.3 0.03 0.11 1.0 0.48
-0.08 0.04 -0.13 -0.02 0.09 -0.11 0.17 0.31 0.3 0.25 0.15 0.07 -1.61 0.18 -0.13 -0.35 -0.64 -0.49 -0.18 -2.19 -0.98 -2.51 -0.55 -0.28 0.58 0.94 0.98 0.45 -0.36 -0.21 0.46 0.69
-0.34 -0.22 -0.12 -0.03 0.17 0.14 0.38 0.32 -0.12 -0.52 -0.6 -0.84 -1.1 -0.71 0.59 -1.3 -0.32 -0.47 -0.93 -2.35 -3.59 -1.69 -1.02 -0.56 -1.11 -0.12 1.99 1.63 -0.87 -0.84 1.04 1.29
-0.13 -0.97 -0.81 -0.44 -0.65 -0.78 -0.02 1.34 0.42 1.09 0.67 0.95 -2.95 -1.56 -4.7 -2.47 -3.35 -2.0 -1.1 -3.02 -0.8 - -2.59 -2.23 0.29 2.56 2.12 0.76 -1.38 -1.79 -0.84 -0.75
0.71 0.74 0.29 -0.17 -0.3 -0.57 -0.89 -0.81 -1.21 -0.96 -0.82 -0.26 -2.62 -1.61 -2.19 -1.78 -1.1 -0.42 -0.56 -4.88 -2.94 -5.04 -1.15 -0.93 -1.98 -0.95 0.6 0.29 -1.14 -1.13 3.27 1.82
0.38 0.15 -0.18 -0.14 -0.33 -0.18 -0.26 -0.24 -0.38 -0.31 -0.38 -0.35 -0.86 -0.21 0.42 -1.04 -1.22 -0.86 -0.98 -1.42 -2.26 -2.68 -0.45 -0.01 0.22 -0.42 0.08 -0.28 -1.49 -1.38 2.39 2.13
0.19 -0.28 -0.12 -0.08 -0.07 -0.26 -0.17 0.25 0.41 0.43 0.56 0.31 -0.52 -0.67 -0.93 -0.39 -0.38 -0.52 0.88 -0.62 -0.72 0.01 -0.66 -0.76 -0.09 1.31 0.43 0.63 -0.18 -0.07 -0.75 -0.4
-0.63 -0.35 -0.27 -0.18 -0.23 -0.01 0.29 -0.08 -0.2 -0.34 -0.48 -0.96 -0.25 -0.22 -0.62 0.06 -0.6 -0.29 0.58 -4.58 -3.56 -3.86 -0.37 -0.11 -0.65 0.13 1.67 1.55 -0.6 -0.3 1.16 1.09
0.38 0.24 0.47 0.48 0.84 0.17 -0.04 0.23 0.4 1.49 0.69 0.8 -0.2 -5.94 -4.69 -3.19 -4.11 -4.43 -1.15 -6.68 -4.47 -3.59 -2.61 -2.74 -0.19 2.16 1.21 2.12 -4.59 -4.46 -5.02 -4.95
-1.97 -2.16 -3.4 -2.37 -1.52 -2.74 -1.96 -1.65 -1.8 -1.72 -1.34 -1.5 -2.5 -2.21 -1.22 -1.14 -3.08 -0.95 1.39 -1.08 0.07 - -1.62 -0.16 -1.6 -0.3 -1.49 -2.89 -0.93 -0.71 3.36 3.09
1.01 0.73 0.21 -0.04 0.01 -0.1 -0.2 -0.12 -0.43 -0.53 -0.33 -0.17 -1.95 -0.87 -0.74 -1.62 -0.2 -0.07 -0.63 -3.55 -3.33 -2.78 -0.76 -0.62 -1.6 0.01 1.4 1.17 -0.64 -0.68 1.8 1.37
-0.45 -0.55 -0.58 -0.12 -0.14 -0.2 0.23 0.24 0.27 0.19 0.1 -0.06 -0.32 -0.39 -0.35 -0.22 -0.81 -0.95 0.22 -6.32 -4.15 -6.28 -0.45 -0.17 -1.85 0.9 0.75 0.46 -0.32 -0.23 2.01 1.29
0.09 0.27 0.37 0.25 0.38 0.41 0.33 0.14 -0.05 -0.3 -0.29 -0.33 -1.28 -0.81 0.09 -0.93 0.26 -0.08 -0.5 -2.34 -1.69 -0.9 -0.51 -0.47 -0.49 -0.76 0.65 0.45 -0.29 -0.37 1.29 1.44
1.43 0.41 -0.64 -0.62 0.11 -0.3 -0.78 -0.76 -1.44 -0.39 -0.72 0.05 -1.32 0.49 -3.01 0.12 -1.71 0.83 0.74 -7.2 - - -1.93 -1.51 -5.34 -0.49 0.15 -0.84 -0.38 -0.88 2.48 2.06
-2.09 -1.78 -2.2 -2.56 -1.92 -2.54 -2.73 -2.47 -4.13 -4.53 -4.62 -4.66 -7.32 -5.45 -4.24 -5.95 -3.65 -0.96 -4.73 -1.94 -3.59 -1.99 -2.5 -1.17 -1.52 -4.25 1.19 0.81 -4.25 -4.14 3.66 3.46
-0.5 -0.59 -0.22 -0.14 0.09 -0.21 0.1 0.21 0.13 0.03 0.02 -0.4 0.06 -1.03 0.55 -0.25 -1.1 -1.33 0.08 -2.99 -0.42 -1.65 -0.58 -0.42 -0.39 0.83 0.9 0.67 -0.59 -0.45 1.05 1.57
-0.77 -1.4 -1.52 -1.38 -0.77 -1.31 -0.37 -1.05 -0.43 -1.03 -0.99 -1.73 -2.73 -1.86 -0.67 -2.36 -1.45 0.05 -1.42 -1.86 -0.0 0.87 -1.29 -1.12 0.08 -1.78 1.16 0.5 -2.14 -1.69 2.71 2.8
-0.06 -0.24 -0.52 -0.1 -0.01 -0.14 0.12 0.3 0.28 0.46 0.53 0.32 -0.23 -0.42 -1.06 0.02 -0.69 -0.95 0.11 -0.1 -1.05 -0.23 -0.35 -0.3 -0.2 0.89 0.58 0.44 -0.32 -0.27 0.43 0.41
0.16 0.08 0.12 0.21 0.09 0.3 0.18 0.32 0.27 0.43 0.28 0.22 -0.97 -0.69 0.02 -0.3 -0.22 -1.37 -0.03 -2.82 -1.17 -5.26 -0.33 -0.46 0.37 1.47 0.59 0.39 -0.3 -0.58 0.17 0.23
-0.22 -0.14 -0.04 0.03 0.19 0.03 0.07 0.16 -0.16 -0.05 -0.19 -0.48 -0.09 -0.5 -0.32 -0.17 -0.92 -1.21 0.01 -2.9 -1.5 -2.29 -0.34 -0.02 -0.1 0.66 0.93 0.69 -0.93 -1.02 1.69 1.26
-0.44 -0.54 -0.52 -0.39 -0.15 -0.26 -0.03 0.31 0.26 0.51 0.43 0.19 -0.12 -0.6 -0.68 -0.56 -1.53 -1.32 -0.59 -1.45 -1.1 -0.38 -0.71 -0.41 0.36 1.43 1.23 1.02 -1.17 -1.1 0.49 1.07
-0.38 -0.31 -0.26 -0.08 0.36 0.35 0.42 0.37 -0.13 -0.33 -0.72 -0.85 -1.21 -0.3 0.66 -0.9 -1.09 -1.73 -0.57 -2.06 -3.49 -1.51 -0.96 -0.87 -1.22 0.54 1.3 1.19 -1.13 -0.97 2.2 0.9
-0.11 -0.1 -0.1 -0.21 -0.04 -0.31 -0.12 0.19 0.12 0.1 0.26 0.06 -0.07 -0.36 0.3 0.1 -0.66 -1.13 0.12 0.1 -0.0 -0.1 -0.76 -0.5 0.11 1.16 0.45 0.4 -0.37 -0.31 -0.03 0.06
-0.38 -0.3 -0.01 0.0 -0.01 -0.07 0.12 0.48 0.11 0.14 -0.07 -0.34 -2.64 -1.66 -3.2 -2.36 -0.84 -0.98 -0.04 -4.2 -0.87 -2.0 -1.0 -1.06 -0.08 0.82 0.89 0.66 -0.69 -0.82 2.13 1.89
-0.25 -0.81 -1.1 -0.86 -1.22 -1.02 -1.36 -0.75 -1.15 -1.0 -1.03 -1.3 -0.31 -0.15 -0.2 -0.5 -2.13 -0.61 -0.42 0.07 -1.08 -2.63 -0.88 -0.32 -0.02 -0.03 0.41 -0.0 -1.79 -2.0 3.1 2.17
-0.77 -0.99 -1.41 -1.47 -1.27 -1.39 -1.19 -1.1 -0.8 -0.91 -0.84 -0.96 -0.46 -0.06 0.63 -0.53 -1.18 -1.07 -0.19 0.26 0.64 -1.03 -0.61 -0.28 -1.13 -0.52 -1.22 -1.81 -1.12 -1.09 2.76 2.65
-1.61 -0.81 -0.05 0.35 0.47 0.29 0.61 0.45 -0.13 -0.52 -1.1 -1.44 -0.46 0.69 -0.12 0.7 -0.19 -0.47 -0.23 -4.28 -2.06 -3.56 -1.08 -1.14 -0.42 0.66 1.08 0.41 -0.53 -0.72 1.49 1.25
-0.37 -0.16 -0.25 0.11 0.22 0.02 -0.1 -0.03 0.09 -0.0 -0.27 -0.33 0.16 -0.2 -0.24 0.34 -1.18 -1.5 -0.37 -3.42 -3.09 -6.43 -0.32 -0.32 0.63 1.55 1.22 1.0 -0.9 -0.61 0.69 0.63
0.05 0.06 -0.02 0.08 0.2 0.08 0.06 0.02 -0.04 0.15 0.03 0.09 -0.15 -0.73 -0.41 -0.26 -0.73 -1.08 -0.21 -2.47 -0.34 0.2 -0.57 -0.41 -0.35 1.12 1.08 1.09 -0.79 -0.73 0.27 0.35
-0.61 -0.59 -0.38 -0.28 -0.32 -0.28 0.02 0.57 0.61 0.68 0.81 0.49 0.41 -1.74 -1.83 0.26 -1.37 -1.5 0.21 0.24 -0.02 -0.31 -1.23 -0.7 -0.28 1.56 0.91 0.67 -0.75 -0.69 -0.75 -0.72
0.27 0.06 -0.04 0.01 -0.1 -0.09 0.04 0.17 0.28 0.17 0.26 0.27 -0.4 -0.46 0.14 -0.2 -0.57 -0.71 -0.05 -1.39 -0.35 -0.76 -0.34 -0.35 0.43 0.77 0.66 0.49 -0.27 -0.37 0.03 0.38
1.12 1.17 0.01 -0.68 -0.95 -1.51 -0.9 -1.45 -1.67 -2.04 -0.91 -0.07 -2.15 0.04 -8.76 -2.0 0.18 0.41 0.93 -2.59 0.13 -6.61 -1.15 -1.77 0.8 -1.79 -0.02 -0.96 0.15 0.33 2.23 1.87
-2.78 -3.41 -1.55 -2.25 -1.71 -0.57 0.33 0.34 0.29 -0.21 -1.06 -2.93 -3.73 -4.67 -5.59 -3.13 -1.22 0.53 0.31 -3.11 0.78 -2.33 -2.01 -1.69 1.32 0.89 1.82 1.3 -0.1 -0.15 2.05 1.45
-0.22 -0.15 -0.11 -0.27 -0.07 -0.19 0.35 -0.07 0.01 -0.13 -0.14 -0.25 -0.58 0.15 0.25 -0.33 -0.88 -0.63 0.27 -1.1 -0.48 -1.54 -0.81 -0.68 -1.19 -0.27 0.08 -0.3 -0.38 -0.22 2.0 1.63
-2.64 -1.31 -0.75 -1.02 - -2.08 -1.66 -0.57 - - -0.35 -3.26 -1.24 -1.45 -0.69 -0.29 -0.73 -1.04 2.02 - - -1.59 -0.77 -1.41 -1.08 -1.03 0.13 0.09 -3.29 -0.73 3.35 2.47
-0.86 -1.34 -1.37 -1.28 -0.57 -1.3 -0.22 -0.35 0.04 0.02 -0.07 -0.14 -0.56 -1.29 -1.21 0.03 -1.29 0.41 -0.69 -4.83 0.08 - -0.99 -0.69 -1.7 0.7 0.84 0.3 -0.35 -0.51 2.12 2.53
-0.22 -0.01 -0.13 0.07 0.19 0.01 0.11 0.3 0.09 0.33 0.34 0.09 -0.16 0.01 -0.09 -0.14 -0.58 -1.41 -0.03 -1.37 -1.59 -0.13 -0.28 -0.21 0.41 1.0 0.61 0.38 -0.49 -0.39 -0.06 0.47
0.02 0.13 0.24 0.27 0.25 0.2 -0.14 0.16 0.21 0.23 0.17 0.03 0.09 -0.43 -0.63 -0.18 -0.62 -0.4 -0.33 -4.11 -1.6 -1.8 -0.03 -0.04 -0.16 1.21 0.98 0.52 -0.58 -0.49 0.2 0.43
0.2 -0.1 -0.66 -0.26 -0.43 -0.43 -0.36 -0.47 -0.85 -0.57 -0.64 -0.61 -1.57 -0.93 -0.34 -1.15 -0.92 -0.4 -0.29 -1.23 -1.45 -0.93 -0.69 -0.5 -0.52 -0.74 0.01 -0.33 -1.08 -1.15 2.97 2.08
0.3 0.18 0.14 -0.03 -0.03 -0.03 0.16 0.28 0.04 0.04 -0.02 0.19 -3.87 -2.25 -3.8 -4.09 -0.09 0.42 -1.5 -3.13 -0.67 -6.99 -1.14 -1.68 0.3 -1.13 0.84 0.85 -0.27 -0.26 1.93 1.91
-1.35 -1.33 -1.19 -0.82 -0.63 -1.06 -0.79 -0.55 -1.31 -1.24 -0.96 -1.76 -0.54 -1.53 -1.53 -0.38 -0.59 -0.24 -0.03 -3.95 -3.76 -3.35 -0.01 0.11 -1.18 1.46 1.28 0.86 -0.75 -0.86 2.29 2.52
-0.08 -0.61 -0.63 -0.55 -0.25 -0.06 0.1 0.38 0.32 0.33 0.33 0.19 -0.99 0.0 0.27 -1.02 -0.62 -0.61 -0.49 -5.46 -1.21 -0.92 -1.13 -0.76 -1.33 -0.32 0.57 0.04 -0.64 -0.52 1.59 2.23
0.14 0.54 0.64 0.42 0.34 0.52 0.19 -0.08 -0.24 -0.48 -0.42 -0.49 -1.41 -1.31 -1.04 -1.67 0.18 0.2 -0.8 -4.04 -1.98 -3.81 -0.4 -0.53 0.36 -0.81 1.52 1.39 -0.49 -0.56 1.0 0.81
-0.47 -0.39 -0.3 -0.3 0.41 -0.07 0.01 0.23 0.15 0.16 0.17 -0.33 0.12 -0.43 0.57 0.31 -0.76 -0.83 0.12 -0.22 0.16 -0.34 -0.52 -0.05 -0.44 1.47 0.68 0.61 -0.57 -0.5 -1.04 -0.92
0.19 -0.3 0.24 0.12 0.57 -0.14 -0.2 -0.16 0.48 0.94 0.58 0.49 -2.53 -3.22 -1.36 -2.79 -4.11 - -3.1 -6.15 -2.05 0.39 -3.71 -3.16 -0.59 2.59 1.65 2.23 -4.11 -4.07 -5.31 -6.38
-0.7 -0.3 0.2 0.68 0.97 1.29 0.89 0.31 0.28 0.13 -0.34 -0.74 -0.92 -1.09 -0.05 -0.5 -0.31 -1.09 -0.72 -3.65 -3.84 -2.65 0.1 0.1 -2.38 0.03 0.82 0.63 -1.03 -0.86 1.23 0.78
- - - - - - - - - - - - -2.99 - -2.49 -0.64 -3.07 0.11 1.53 - - - -1.09 -0.18 - - -11.56 - 0.2 -1.42 3.71 3.46
0.23 1.02 0.87 0.43 0.35 0.56 -0.05 0.13 0.05 -0.22 0.26 -0.25 -3.14 -1.23 -3.91 -2.3 -0.1 -0.67 -0.82 -8.31 -2.31 - -0.43 -1.44 -1.03 -0.23 1.58 1.23 -0.03 -0.02 1.11 0.87
-0.15 -0.63 -0.45 -0.26 -0.25 -0.41 0.51 1.11 0.45 1.08 0.54 1.23 -1.98 -1.57 -5.53 -1.99 -2.42 -3.0 -0.51 -6.68 -3.85 - -1.33 -1.06 0.91 1.91 1.93 0.83 -1.12 -1.4 -0.54 -0.2
-0.15 -0.31 -0.27 -0.23 -0.25 -0.2 0.06 0.16 0.4 0.52 0.52 0.31 -0.43 -0.94 -0.6 -0.31 -1.02 -1.06 -0.43 0.08 -0.57 0.3 -0.65 -0.56 0.0 1.47 1.03 0.63 -0.82 -0.75 -0.16 0.22
-0.37 -0.1 -0.04 0.2 0.23 0.24 0.34 -0.03 -0.11 -0.35 -0.42 -0.48 -1.11 -0.31 -0.04 -0.09 -0.31 -0.39 0.26 -2.32 -2.05 -3.97 -0.43 -0.17 0.08 -0.25 1.21 1.09 -0.34 -0.15 1.16 1.04
-0.27 -0.06 0.12 0.29 0.59 0.67 0.6 0.32 -0.04 -0.5 -0.49 -0.67 -1.45 -0.31 0.34 -1.12 0.19 -0.32 -0.4 -1.85 -1.55 -1.43 -0.43 -0.53 0.15 -0.62 1.13 1.01 -0.41 -0.44 0.77 0.87

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.