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Heatmap: Cluster_193 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
331.49 224.16 236.43 312.73 235.53 273.97 223.13 318.12 310.89 399.16 406.65 400.82 364.97 221.08 473.5 356.07 261.75 359.46 274.42 1333.32 394.4 1737.04 283.9 281.97 210.29 716.67 266.06 218.99 313.54 273.73 401.25 452.71
5.61 4.84 4.96 6.3 7.82 12.52 10.7 10.7 9.13 15.3 8.21 10.34 6.3 4.12 6.32 6.17 6.9 7.92 8.74 20.01 10.63 42.95 6.95 6.08 5.9 11.89 18.35 18.05 7.91 7.51 8.64 8.61
35.14 44.75 35.57 34.9 29.57 31.45 33.3 33.23 35.5 32.69 35.53 32.03 23.2 6.91 16.19 21.21 27.49 28.85 30.45 60.38 4.07 98.56 29.94 29.09 3.75 51.61 29.18 41.52 28.17 28.48 28.81 33.33
5.44 5.08 3.7 7.3 11.84 12.73 12.81 13.21 12.34 10.03 9.82 7.38 4.31 4.7 12.08 7.81 8.3 7.67 6.89 32.07 20.8 47.19 6.73 5.99 3.89 4.83 11.87 14.76 8.33 8.61 10.48 9.58
1.74 1.96 2.16 1.93 2.22 1.77 1.78 0.89 2.47 1.24 1.92 1.61 0.26 0.04 0.47 0.45 1.56 0.63 0.41 10.31 0.18 5.44 0.1 0.03 1.72 0.15 0.35 0.13 0.55 0.83 0.69 0.48
31.25 34.66 28.25 31.06 35.72 30.95 29.7 32.48 36.14 37.46 34.32 33.39 23.84 18.06 26.83 36.37 24.52 25.85 27.89 35.5 31.25 90.47 27.26 33.01 20.81 37.7 28.66 29.24 26.85 28.11 21.83 20.19
3.66 4.73 3.17 4.97 8.77 9.49 7.85 9.88 6.36 4.81 5.95 4.19 2.11 2.88 10.09 2.94 2.54 1.61 2.98 14.63 7.41 28.6 3.88 3.78 5.31 9.43 10.7 15.55 4.63 4.33 2.71 2.13
1.7 1.62 1.22 1.65 3.65 4.53 6.27 5.65 5.73 4.95 2.81 2.39 0.47 0.4 1.36 0.62 1.64 2.28 1.37 10.82 6.19 18.76 1.28 0.84 2.25 2.76 5.27 4.85 2.19 1.91 2.28 1.72
11.3 14.9 17.47 14.64 14.18 19.22 15.36 14.95 13.93 13.22 14.09 12.59 10.31 8.38 17.21 14.95 13.58 9.48 16.34 18.26 16.17 29.82 13.43 13.18 13.41 8.3 8.62 11.37 12.71 13.73 11.97 11.65
9.44 10.58 10.22 9.62 9.59 10.52 10.04 8.69 9.21 10.95 9.96 8.85 9.82 9.44 9.53 10.64 4.8 2.32 9.94 42.75 17.88 44.84 6.09 7.18 7.89 9.44 8.93 8.55 6.39 6.86 5.18 5.43
11.57 6.62 11.66 8.82 6.96 10.32 9.8 8.7 10.06 8.18 8.84 6.69 2.24 4.15 7.58 2.56 2.46 10.12 2.2 14.95 18.59 24.36 3.21 3.76 8.25 15.33 11.49 15.89 3.27 3.53 1.87 2.19
11.2 12.25 10.42 14.99 17.69 12.24 12.96 14.61 16.47 8.82 13.09 11.66 8.17 9.42 12.26 12.72 4.63 0.45 6.79 9.85 2.29 28.75 10.48 10.86 3.87 18.87 21.01 17.33 4.82 4.1 7.49 7.73
40.15 34.89 39.58 38.52 35.1 39.53 36.0 40.34 46.59 58.71 47.67 43.55 36.61 25.59 29.79 53.89 18.44 20.62 24.41 52.18 59.34 114.83 29.08 36.41 27.75 52.81 26.07 27.88 24.89 24.38 22.14 21.28
121.91 95.86 111.01 109.23 128.18 138.23 147.96 162.54 176.63 144.97 161.74 126.11 31.84 70.41 68.07 40.14 189.66 220.38 85.6 257.88 260.14 541.65 99.12 88.07 259.02 140.25 210.12 190.97 152.73 152.1 154.78 193.7
51.02 50.39 52.71 45.8 50.11 49.93 44.15 45.32 59.22 51.36 50.5 46.96 16.62 28.42 62.43 38.17 36.4 22.47 110.89 57.85 15.36 65.66 30.16 26.44 58.62 48.72 48.45 44.56 30.65 37.32 31.78 31.87
70.69 77.79 57.76 67.13 56.43 70.96 64.29 67.66 89.18 83.31 76.47 85.49 14.88 50.2 72.91 54.16 47.07 12.52 49.51 105.01 89.87 191.15 23.49 29.43 136.12 66.43 61.21 25.23 35.73 44.7 31.52 30.49
66.74 66.88 54.6 63.74 71.13 60.76 60.55 62.14 76.26 69.56 75.17 64.97 54.85 31.56 43.99 53.54 41.38 55.71 52.42 119.44 40.03 138.03 63.0 72.56 35.12 48.85 46.53 37.74 43.09 47.53 41.72 44.41
3.74 5.1 7.27 6.26 7.75 5.78 5.48 5.13 5.81 5.65 4.14 4.35 3.21 5.28 7.14 3.33 5.19 1.71 10.32 6.32 9.54 26.96 4.05 3.44 13.62 8.67 9.61 11.39 5.29 6.06 1.7 1.29
15.42 19.52 21.82 20.21 17.46 17.71 20.84 22.65 25.63 23.5 23.66 21.09 26.18 11.73 6.21 26.96 11.63 6.68 15.18 39.94 8.46 30.4 16.27 17.97 14.53 11.98 11.7 9.93 12.82 13.84 15.18 16.32
0.9 1.17 0.97 2.49 0.86 1.87 0.64 1.35 0.69 1.89 1.41 1.39 2.99 1.08 0.97 2.62 1.0 0.23 1.89 6.18 1.39 5.21 1.87 2.0 4.15 2.06 2.21 1.1 1.12 1.09 1.36 1.41
0.09 0.05 0.0 0.06 0.0 0.15 0.18 0.22 0.28 0.14 0.09 0.14 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.62 0.0 0.62 0.0 0.05 0.14 0.06 0.0 0.21 0.03 0.03 0.0 0.0
3.44 2.83 4.32 3.41 3.5 3.84 4.97 2.19 4.4 3.19 3.37 2.49 1.5 2.58 4.06 0.92 0.8 0.08 1.15 4.36 1.97 7.13 0.96 1.1 2.05 5.11 3.52 2.79 0.36 0.77 0.5 0.24
4.72 4.8 3.9 5.59 4.37 6.91 7.04 5.03 5.32 6.12 3.91 3.82 3.33 1.78 3.94 4.08 2.36 1.9 6.09 1.98 3.52 23.94 2.24 3.4 2.99 3.81 2.62 4.8 2.53 2.83 1.27 1.04
1.14 2.36 1.64 1.54 2.45 1.88 1.3 0.92 1.52 1.43 1.53 1.17 0.78 0.68 0.55 0.96 0.8 0.64 1.16 2.68 4.67 7.62 0.71 0.25 0.47 0.94 1.39 1.74 0.56 1.26 0.41 0.34
8.63 12.8 16.99 17.22 14.74 18.91 17.63 17.03 16.75 16.86 14.33 12.16 4.06 4.36 12.31 5.89 9.6 1.25 9.42 19.86 11.55 55.98 5.96 5.59 18.65 27.84 11.12 8.14 7.49 7.87 8.38 8.43
4.83 3.56 2.48 1.53 3.37 3.06 2.48 3.03 5.16 6.92 6.73 4.98 4.49 3.64 3.3 8.74 4.61 3.76 10.3 7.78 14.61 8.91 1.71 0.97 0.72 4.93 0.69 1.7 9.8 8.91 16.11 14.67
2.08 2.03 1.94 2.04 2.34 3.34 2.54 2.51 2.78 2.09 1.6 1.8 1.78 1.36 2.91 1.7 1.11 0.52 3.17 6.55 2.14 8.71 1.24 1.88 1.05 1.34 2.61 2.68 1.02 1.48 1.85 2.09
4.45 3.81 3.58 3.84 3.72 5.12 4.19 4.29 4.63 4.11 3.62 3.91 0.52 1.31 2.63 0.41 1.63 2.53 4.64 6.52 6.28 15.29 1.53 1.41 5.03 5.32 5.63 5.29 1.93 2.02 1.2 0.82
0.03 0.02 0.02 0.02 0.0 0.03 0.0 0.18 0.03 0.04 0.0 0.19 0.0 0.0 0.0 0.0 0.03 0.0 0.1 5.29 0.0 6.54 0.03 0.0 0.12 0.06 0.0 0.0 0.06 0.06 0.06 0.03
2.65 2.04 2.11 2.57 3.08 4.48 6.6 7.06 8.14 6.83 5.19 3.67 1.29 0.48 3.44 2.05 1.7 3.14 2.73 4.99 5.17 24.82 1.68 2.05 0.36 4.45 5.35 6.43 2.77 2.72 2.51 2.64
52.32 45.22 30.98 37.89 46.35 38.87 40.49 47.34 41.94 41.58 42.46 45.35 33.44 37.72 28.77 51.26 42.46 46.95 58.02 60.29 59.91 59.15 39.99 44.64 38.81 63.66 49.45 48.61 46.48 50.35 94.03 68.69
3.46 3.9 4.71 5.38 8.28 4.21 4.1 3.22 2.92 3.29 3.88 3.43 1.72 1.21 4.09 3.86 2.86 1.44 2.22 0.04 1.5 14.29 4.03 3.86 2.13 2.07 1.1 2.56 1.2 2.21 1.23 1.09
2.53 3.27 4.53 1.48 0.81 2.24 1.55 3.11 2.62 2.29 2.31 1.59 0.08 1.04 1.38 0.0 0.04 0.04 0.11 2.48 2.88 1.24 0.03 0.21 3.13 2.77 4.09 5.56 0.03 0.14 0.1 0.1
0.1 0.19 0.06 0.22 0.71 1.02 0.86 1.05 0.99 0.36 0.27 0.19 1.25 0.05 0.62 0.31 0.42 0.19 0.12 4.82 1.42 8.87 0.37 0.05 1.11 1.08 4.2 3.41 0.4 0.32 0.38 0.41
0.89 1.34 0.66 1.36 1.11 0.88 0.73 0.8 0.89 1.03 0.68 0.77 0.62 1.35 1.0 1.09 0.29 0.49 3.26 2.82 0.0 3.55 0.53 0.74 2.22 2.32 1.52 2.1 0.34 0.26 0.43 0.38
1.08 1.29 1.05 0.83 1.74 1.16 0.88 0.93 0.9 0.6 1.32 1.32 1.59 1.02 3.9 1.89 0.72 0.72 1.24 2.91 0.78 8.46 0.28 0.29 1.94 1.89 1.02 0.95 0.5 0.66 0.23 0.2
8.17 9.89 7.03 8.4 7.33 9.3 11.7 11.46 12.62 14.2 11.65 12.2 9.03 3.52 3.18 7.6 8.42 12.88 7.17 15.42 26.58 0.86 16.67 14.76 11.38 6.46 4.09 5.07 11.52 11.86 25.77 26.25
0.73 1.05 0.92 1.1 2.31 1.32 1.37 1.68 1.86 1.14 1.82 1.03 0.0 0.99 0.43 0.0 0.0 0.0 0.04 0.1 0.19 5.63 0.0 0.02 0.28 0.3 0.54 0.18 0.0 0.1 0.0 0.0
6.4 8.37 7.92 9.61 8.82 9.14 6.08 7.05 9.53 12.25 8.27 10.73 2.0 4.37 14.63 3.75 4.05 0.21 1.77 27.73 3.56 26.47 3.21 2.87 11.05 8.17 4.63 2.74 1.56 2.47 1.88 2.35
3.14 2.52 4.11 3.06 5.89 2.76 4.4 4.59 3.27 3.01 4.83 2.58 0.53 0.88 3.5 0.78 1.97 3.73 3.56 13.54 0.44 5.93 1.83 1.08 1.1 2.32 3.41 3.94 1.51 2.43 1.49 1.27
0.35 0.51 0.67 0.37 0.61 0.41 0.48 0.4 0.29 0.32 0.26 0.3 0.22 0.12 0.94 0.33 0.6 0.34 0.42 1.42 0.13 1.28 0.88 0.46 0.1 0.06 0.28 0.55 0.3 0.43 0.13 0.14
1.21 1.82 1.65 1.33 0.89 1.29 1.7 0.92 2.32 2.1 2.52 1.53 1.29 1.33 4.25 2.43 1.51 2.2 1.64 4.78 2.21 4.83 2.41 1.14 1.0 0.71 0.86 1.48 1.26 1.54 0.35 0.57
7.27 5.23 6.35 6.88 5.27 6.87 5.68 6.36 6.53 11.53 10.32 8.97 8.63 5.51 8.99 9.2 11.17 7.07 13.05 11.7 9.97 8.57 9.1 9.0 12.38 5.42 6.13 5.94 10.48 11.14 19.47 22.67
38.27 42.18 53.65 51.14 54.21 47.47 51.98 48.39 59.21 55.81 48.38 44.84 12.62 14.78 16.47 13.71 31.85 11.56 28.22 35.54 41.89 206.83 19.27 19.95 12.18 51.45 40.73 43.41 25.54 27.2 16.3 15.27
19.72 18.58 16.29 17.38 19.17 19.89 17.4 20.38 20.59 19.88 21.57 18.15 12.98 8.06 15.91 12.1 8.17 10.81 16.35 43.34 23.08 66.38 10.19 11.46 21.83 21.91 21.57 15.13 9.1 7.88 12.7 16.37
7.93 7.92 7.12 6.78 6.69 7.11 6.02 7.58 7.89 6.9 8.87 8.29 4.11 7.97 11.2 5.89 4.85 4.97 5.48 12.27 4.13 25.67 5.25 5.8 5.65 5.43 3.79 3.87 4.23 4.74 3.7 3.41
53.06 49.75 46.4 53.55 54.59 63.41 62.82 65.55 78.49 71.64 68.59 66.15 45.47 59.17 85.12 48.97 38.47 25.93 47.68 57.53 47.44 143.83 43.37 43.53 20.97 79.84 59.86 52.02 37.74 40.79 32.07 32.72
22.33 23.82 26.8 24.12 26.55 24.46 29.28 26.2 26.62 29.29 30.66 28.51 21.07 29.71 31.61 19.43 15.72 9.71 14.94 56.29 8.04 78.23 19.13 19.14 42.75 23.99 19.53 21.84 14.7 17.93 15.38 14.1
5.09 6.52 6.46 9.45 8.22 11.51 13.34 17.46 12.16 6.72 8.35 8.37 8.44 4.32 14.03 6.6 4.68 8.24 8.89 19.33 6.65 72.96 6.58 6.82 5.82 9.14 7.76 7.9 5.31 5.12 4.79 6.39
103.14 93.66 76.57 87.56 83.42 84.84 74.2 95.35 102.95 95.98 94.86 97.86 97.56 115.11 80.08 114.09 52.96 57.17 106.46 111.42 116.34 160.31 78.42 81.95 50.25 81.03 50.04 53.22 72.89 72.16 88.67 97.38
1.84 0.79 0.48 0.31 2.71 3.07 3.33 5.28 2.1 2.14 1.64 0.71 0.62 1.41 0.86 1.87 2.49 2.66 2.17 8.23 0.0 11.29 1.74 1.84 0.0 1.13 4.37 4.57 4.39 3.67 3.5 2.4
85.0 91.48 101.04 143.85 149.28 203.75 171.27 147.48 134.48 132.24 115.64 100.5 124.52 147.32 111.39 123.97 68.85 63.75 106.83 179.21 296.4 322.48 103.73 109.62 135.97 79.82 142.3 136.49 74.57 76.63 80.52 90.92
34.02 33.71 47.14 36.15 35.91 37.81 36.02 41.9 40.29 49.79 44.66 44.13 27.79 12.22 11.57 34.09 22.1 23.28 25.55 118.42 51.12 170.49 27.32 30.57 23.48 21.42 9.87 10.17 26.51 25.08 19.43 18.77
35.74 27.64 29.2 29.6 27.64 33.45 35.77 34.67 36.81 38.58 39.7 32.06 30.18 45.43 70.36 31.75 25.02 34.02 38.46 50.99 30.06 68.86 31.68 35.8 20.29 34.77 24.2 23.73 27.96 24.91 24.66 33.52
18.22 13.46 11.18 9.84 8.81 8.44 8.81 5.93 8.74 9.16 10.54 16.72 4.92 3.83 11.61 8.88 7.94 4.65 8.67 22.2 2.85 22.83 7.26 6.45 8.24 19.61 7.15 8.47 8.93 9.83 8.92 6.67
20.61 21.21 17.8 27.08 27.68 32.14 34.8 40.28 40.43 40.13 36.06 28.36 20.85 27.31 71.81 16.33 11.85 7.89 15.42 62.45 27.19 159.09 15.73 16.87 13.69 31.45 44.48 42.29 13.07 14.27 12.37 15.39
1.07 0.56 0.73 1.06 2.3 3.76 3.98 3.84 2.9 2.98 1.89 1.6 0.46 0.73 1.97 1.06 0.88 1.16 0.56 5.54 2.87 9.23 0.87 0.79 0.65 0.72 2.27 2.78 1.49 1.67 1.51 0.97
18.05 18.09 16.21 14.96 15.43 15.23 11.96 13.54 17.52 15.55 15.31 14.68 16.29 37.36 32.28 21.54 16.93 17.35 26.42 28.58 13.54 40.28 23.98 21.89 22.7 12.19 11.16 10.7 15.7 15.78 12.22 13.61
53.59 45.53 37.46 49.01 42.09 51.1 40.67 44.45 50.71 57.66 59.47 55.47 52.05 29.46 43.12 54.52 35.25 31.18 50.26 78.93 86.31 176.62 53.25 54.92 69.41 30.08 22.94 24.09 34.65 38.66 45.09 46.93

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)