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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Aerial tissue - Light - ZT1 | Aerial tissue - Light - ZT3 | Aerial tissue - Light - ZT5 | Aerial tissue - Light - ZT7 | Aerial tissue - Light - ZT9 | Aerial tissue - Light - ZT11 | Aerial tissue - Dark - ZT1 | Aerial tissue - Dark - ZT3 | Aerial tissue - Dark - ZT5 | Aerial tissue - Dark - ZT7 | Aerial tissue - Dark - ZT9 | Aerial tissue - Dark - ZT11 | Roots | Root elongation and differentiation zone | Root meristematic zone | Aerial roots and rhizophores | Shoot tips | Microphyll | Strobili | Shoot apical meristem - AC | Shoot apical meristem - Core | Shoot apical meristem - P1 | Stem - Top | Stem - Bottom | Whole plant | Aerial tissue - Stress - Dark | Aerial tissue - Stress - High light | Aerial tissue - Stress - Cont | Aerial tissue - Stress - 37C 1h | Aerial tissue - Stress - 37C 3h | Aerial tissue - Stress - 4C 1h | Aerial tissue - Stress - 4C 3h |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1.16 | 0.35 | - | -0.74 | - | - | - | - | 0.19 | - | - | - | - | 1.66 | 0.95 | - | -0.0 | 1.0 | 3.76 | - | - | - | -0.05 | 0.25 | - | - | - | - | - | 0.44 | - | 0.69 | |
| -0.64 | - | - | -2.08 | - | - | - | 0.43 | -1.21 | -0.55 | 0.66 | -0.95 | - | - | - | 0.07 | -1.13 | 3.54 | 1.47 | - | - | - | -2.42 | - | 2.61 | -0.05 | - | - | -1.43 | -1.26 | 0.17 | 0.54 | |
| 1.03 | 0.51 | 0.95 | 0.33 | -1.3 | 0.69 | 0.53 | 0.54 | 1.93 | 0.86 | -2.2 | 0.28 | -1.81 | -1.34 | 0.82 | -2.79 | -2.81 | 2.19 | - | - | 1.24 | -1.35 | -3.0 | -1.95 | - | 1.14 | -1.69 | - | -2.91 | -2.92 | -2.96 | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | -0.77 | - | -0.77 | - | - | - | - | - | - | - | 2.49 | 4.66 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -0.17 | -1.43 | 0.17 | -2.76 | - | -2.19 | 1.21 | 1.08 | -0.84 | -2.65 | -2.41 | -0.82 | -0.7 | - | 0.63 | -0.17 | -0.3 | 3.2 | 0.75 | - | - | - | - | - | - | - | 0.07 | 1.57 | 0.79 | 0.44 | -0.06 | -0.86 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | 1.73 | 1.44 | - | 2.01 | - | 2.62 | 2.72 | - | - | - | -1.58 | - | - | 1.34 | - | - | -0.35 | -0.42 | 0.94 | 1.54 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -1.42 | 0.0 | -2.79 | -1.09 | - | -0.56 | 0.24 | -0.22 | -2.62 | -0.41 | -1.43 | -0.94 | 1.04 | -0.88 | 1.06 | 1.24 | -1.65 | 2.83 | 1.77 | - | - | - | - | -0.76 | 1.43 | -1.27 | 0.35 | 0.84 | -3.35 | -2.35 | -2.39 | -1.47 | |
| - | - | - | -0.68 | - | 0.1 | - | 0.33 | - | 1.11 | 2.54 | -0.74 | - | - | - | 0.92 | - | 3.16 | 0.03 | - | 2.34 | - | - | - | - | - | - | - | -0.01 | 0.04 | 0.01 | -0.95 | |
| - | - | - | - | - | - | -15.96 | - | - | - | - | - | - | - | -20.2 | - | - | 4.0 | - | - | - | - | - | - | - | - | - | - | 4.0 | -14.47 | - | - | |
| -0.63 | -1.28 | -1.3 | -0.54 | -0.28 | -1.26 | -1.51 | -0.49 | -0.91 | -1.64 | -0.76 | -1.13 | 0.84 | 0.28 | 1.05 | 0.08 | -1.31 | 2.42 | -0.46 | 1.66 | 0.18 | 0.3 | -0.31 | 0.26 | 0.19 | -0.17 | -0.55 | 0.15 | -1.25 | -0.83 | -2.12 | -1.2 | |
| -1.97 | - | - | 1.11 | - | - | -1.01 | -1.13 | -0.92 | 1.02 | 0.0 | -0.95 | -0.66 | - | 0.8 | -0.64 | -0.79 | 2.45 | 3.38 | - | - | - | - | - | - | - | 0.39 | 1.4 | - | 0.21 | - | - | |
| - | - | -2.04 | -2.18 | -1.61 | - | - | - | - | -1.07 | - | -1.75 | 0.92 | 0.49 | 2.0 | 0.48 | 0.28 | 3.46 | -0.21 | - | - | 0.89 | 0.81 | 1.0 | 0.39 | - | - | - | -1.82 | -0.76 | - | -0.25 | |
| -1.09 | -3.33 | -2.55 | -1.21 | -1.42 | -1.51 | -1.35 | -1.9 | -1.14 | -0.85 | -1.43 | -0.69 | -3.63 | 4.2 | -2.28 | - | 0.96 | 1.3 | -2.3 | -5.43 | -0.87 | - | -5.62 | - | -2.74 | - | - | -0.54 | -0.16 | -0.08 | -0.84 | -1.34 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | -1.62 | - | - | 4.4 | 1.4 | - | 2.92 | - | -1.65 | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.47 | - | - | 3.3 | - | - | - | - | - | - | - | - | - | - | - | |
| -1.17 | -0.78 | 0.04 | -1.06 | -0.58 | 0.93 | -0.12 | 0.02 | -0.64 | - | - | -1.67 | 1.2 | 1.32 | 1.54 | 1.14 | -1.48 | -0.12 | 2.86 | - | 2.08 | - | -0.57 | - | - | - | - | - | -0.58 | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | -3.92 | - | 4.98 | -1.94 | - | - | - | -4.38 | -3.65 | - | - | - | - | - | - | - | - | - | - | - | - | -5.52 | |
| -2.8 | -1.96 | -1.97 | -3.45 | -3.84 | -2.35 | -2.22 | -2.37 | -1.64 | -1.58 | -1.96 | -1.84 | -3.88 | -3.27 | -4.2 | -2.84 | -1.85 | 4.28 | 2.16 | - | 0.39 | - | -2.64 | -1.38 | -0.59 | -1.09 | -2.17 | - | -1.37 | -1.33 | -1.48 | -0.92 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -1.82 | -3.21 | -2.34 | -1.88 | -2.0 | -2.95 | -2.4 | -1.55 | -2.82 | -1.0 | -1.17 | -2.42 | 3.95 | 0.94 | 0.24 | 2.85 | -5.26 | 0.02 | -4.57 | - | - | - | -6.76 | -2.73 | -0.27 | -4.26 | -4.02 | -3.72 | -3.95 | -1.64 | -6.94 | -0.95 | |
| -0.9 | -0.83 | -0.94 | -0.45 | -0.55 | -1.1 | -1.36 | -1.28 | -1.54 | -1.2 | -0.67 | -1.46 | 3.53 | 1.71 | 0.4 | 1.36 | -4.28 | -0.66 | -2.13 | - | -6.18 | - | -0.73 | 1.2 | -1.06 | -2.98 | -0.26 | -0.7 | -2.38 | -0.4 | -4.92 | -1.69 | |
| - | - | - | - | - | - | 0.03 | 0.88 | - | -0.08 | - | - | 3.35 | - | - | 0.36 | - | - | 2.52 | - | - | - | - | - | - | 1.29 | - | 2.41 | 1.7 | - | - | - | |
| - | 2.4 | - | - | - | - | - | - | - | -0.47 | 1.24 | - | 3.85 | -1.29 | - | 1.15 | - | - | - | - | - | - | - | -0.96 | - | 2.05 | - | - | - | - | 0.93 | - | |
| -0.82 | 0.02 | -0.38 | -0.37 | -0.18 | 0.56 | 0.14 | 1.05 | 0.58 | 0.54 | -0.74 | -0.73 | -0.6 | 0.02 | 0.71 | -0.66 | -1.71 | 1.46 | -0.22 | 0.03 | -0.19 | 1.16 | -2.66 | -0.79 | 1.12 | -0.58 | -0.33 | -1.26 | -0.86 | -1.72 | -0.94 | 0.05 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.68 | 3.84 | - | - | - | - | - | - | - | 2.39 | 3.21 | - | - | - | - | |
| - | 0.08 | - | -0.29 | - | - | - | - | - | -0.03 | - | - | - | - | - | - | - | - | 4.86 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -0.59 | -0.87 | -1.04 | -1.88 | -2.85 | -1.53 | -0.31 | -0.0 | -0.84 | -0.67 | -0.57 | -1.56 | 3.69 | 1.08 | -6.29 | 0.26 | -2.66 | 1.86 | -2.94 | -3.11 | 1.42 | - | -2.53 | -3.52 | -0.84 | -1.21 | -1.77 | -1.76 | -2.0 | -2.06 | -3.24 | -2.82 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.79 | 2.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | 0.74 | - | 0.02 | - | - | - | - | - | 3.9 | 3.2 | - | - | - | 0.18 | 0.09 | - | - | 1.55 | - | - | - | - | - | |
| -0.26 | -0.73 | -0.11 | -0.53 | -1.59 | -1.23 | 0.86 | -1.01 | 0.27 | 0.45 | 0.44 | -0.34 | - | - | -3.57 | - | -2.84 | 4.19 | -0.38 | - | -1.57 | - | -3.89 | -3.91 | - | -2.76 | - | -0.64 | -2.34 | -2.83 | -2.87 | -2.94 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 2.54 | - | - | - | - | - | - | - | - | - | - | - | 4.45 | - | - | 2.13 | - | - | - | |
| - | - | -1.81 | - | - | - | - | 0.28 | - | - | - | - | 2.52 | - | - | - | - | 4.07 | 1.69 | - | - | - | - | - | - | - | - | - | 0.41 | 1.57 | - | -1.37 | |
| 0.78 | - | - | 0.24 | - | - | - | 0.96 | - | -0.1 | - | - | 2.08 | - | -0.39 | 1.57 | - | 1.0 | 1.92 | - | - | - | 0.48 | - | - | 1.31 | 2.62 | - | - | 0.34 | - | 0.23 | |
| - | - | - | - | - | - | - | - | - | - | 0.71 | - | 3.54 | 1.52 | - | 3.99 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -2.53 | -2.34 | -1.94 | -3.52 | -2.49 | -3.62 | -1.73 | -1.45 | -1.64 | -3.24 | -1.65 | -2.77 | 0.69 | 0.47 | 0.28 | 0.85 | -2.03 | 2.7 | 1.04 | - | 0.22 | - | -0.98 | -0.93 | 1.73 | 1.64 | -1.08 | -1.98 | -0.09 | 0.07 | 0.62 | 0.83 | |
| -2.73 | - | - | -1.71 | - | - | - | - | - | - | - | -1.72 | - | - | - | - | -1.66 | 4.22 | 0.33 | - | 3.46 | - | - | - | - | - | - | - | - | - | - | - | |
| -0.4 | -0.34 | - | 0.09 | - | -1.79 | 1.52 | -0.55 | -0.18 | 1.55 | - | -1.39 | - | -1.76 | -1.54 | -1.4 | - | 2.48 | 1.85 | - | - | -0.32 | -1.52 | - | 1.43 | -1.01 | -0.33 | 0.47 | 0.61 | 0.91 | -1.73 | -0.11 | |
| -1.62 | -1.09 | -0.88 | 0.43 | 1.15 | -1.64 | -0.87 | -2.71 | 0.54 | -0.48 | -0.29 | -0.49 | 0.81 | 0.93 | -0.22 | 0.41 | -1.95 | 2.27 | 1.02 | -3.85 | -1.75 | - | -0.3 | -0.34 | - | 0.89 | 0.8 | 0.91 | -0.95 | -0.73 | -1.49 | -0.96 | |
| - | - | - | 2.33 | - | - | 1.33 | - | - | - | - | - | - | 0.25 | - | - | - | 4.26 | 0.53 | - | - | - | - | - | - | - | - | - | 0.37 | - | 0.49 | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | -3.71 | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.94 | - | - | - | - | - | - | - | - | - | 0.47 | - | - | - | - | |
| - | 0.22 | - | - | - | - | - | -0.01 | - | - | - | - | 0.59 | 1.3 | 0.74 | - | - | 3.99 | 3.05 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| 2.4 | - | - | -0.17 | - | - | - | 0.04 | 0.25 | 0.08 | - | 0.26 | - | - | - | 0.22 | - | - | 0.06 | - | - | - | 2.06 | 1.0 | - | 1.45 | - | 2.57 | - | 1.71 | - | 0.06 | |
| -1.67 | - | 3.31 | - | - | - | -0.31 | - | -0.26 | - | - | -0.25 | - | - | - | - | - | 3.98 | 1.37 | - | - | - | - | - | - | - | - | - | - | -0.19 | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -0.33 | -2.81 | -3.09 | -0.9 | -1.95 | 0.83 | -0.79 | -0.62 | -0.39 | -0.86 | 0.0 | -1.02 | -3.48 | -1.25 | -1.33 | -3.31 | -1.21 | 3.87 | 1.17 | - | -1.29 | 0.09 | -2.29 | -2.49 | - | 0.23 | -1.52 | -1.43 | -0.22 | -0.98 | -0.65 | -1.6 | |
| - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -0.73 | -0.77 | -0.46 | -1.56 | -1.52 | -1.29 | -0.27 | -0.02 | -0.4 | -0.67 | 0.03 | -0.29 | -1.02 | -2.08 | -0.03 | -0.57 | -0.83 | 3.73 | -0.84 | - | -1.87 | - | -1.29 | 0.22 | -1.58 | -0.2 | -0.72 | 0.3 | -0.65 | -1.23 | -0.43 | -1.0 | |
| 0.07 | - | 0.49 | -0.65 | - | 0.92 | 0.76 | -0.54 | - | - | -0.05 | - | -0.05 | 0.71 | - | 1.6 | -0.06 | - | 1.2 | - | - | - | 1.47 | 1.8 | 1.93 | 1.93 | - | - | - | -0.17 | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -0.53 | 0.5 | - | - | - | - | - | 1.27 | - | - | - | - | 1.87 | - | -2.02 | - | - | 2.64 | 3.64 | - | - | - | - | 0.3 | - | -0.32 | -0.11 | 0.9 | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | 1.31 | - | - | - | - | - | - | - | 4.71 | 1.73 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | 4.83 | 1.83 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | 1.11 | - | - | - | - | - | 0.76 | - | - | - | - | - | - | 4.0 | 3.6 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -0.74 | -2.35 | -2.18 | -0.57 | -2.14 | -1.43 | -1.13 | -0.57 | -0.04 | 0.03 | 0.01 | -0.97 | -2.02 | 0.03 | -2.91 | -2.11 | 0.17 | 1.6 | 2.96 | - | - | - | -0.89 | -1.18 | 0.51 | 0.51 | 0.12 | 0.45 | -1.18 | -0.3 | 0.92 | 1.06 | |
| - | - | - | - | - | - | - | - | - | - | - | - | 4.95 | - | - | -1.35 | - | - | - | - | - | - | - | - | - | - | - | - | -1.55 | -1.6 | - | - | |
| - | - | - | - | - | - | 0.77 | - | - | - | - | - | - | - | - | - | - | - | 4.47 | - | - | - | - | - | - | 3.03 | - | - | - | - | - | - | |
| 0.42 | 0.33 | 0.21 | 0.28 | 0.35 | 0.12 | 0.02 | 0.2 | 0.24 | 0.3 | 0.3 | 0.38 | -0.08 | -0.27 | -0.04 | -0.26 | -0.24 | 0.51 | -0.08 | -3.78 | -1.78 | -2.36 | -0.07 | -0.1 | -0.1 | 0.57 | 0.54 | 0.62 | -0.1 | -0.13 | -1.03 | -0.81 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.