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Heatmap: Cluster_213 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
48.61 50.35 45.92 45.02 46.0 52.32 47.4 50.77 56.53 58.5 52.02 45.24 51.96 40.85 36.04 61.09 38.33 26.64 70.37 38.93 37.78 11.08 54.76 63.37 64.76 102.7 56.03 66.28 48.36 47.83 32.31 37.31
37.79 42.83 39.51 37.95 36.39 37.66 40.71 37.57 36.16 39.67 40.38 36.29 34.98 40.61 41.37 43.21 28.5 24.15 33.84 23.43 17.96 10.97 36.5 36.66 47.0 38.7 44.62 50.78 28.52 28.71 38.09 43.13
11.59 13.69 16.35 30.29 38.85 39.4 30.01 28.85 22.04 19.61 16.23 12.28 21.17 23.5 31.63 26.65 19.88 9.87 30.4 2.98 12.18 6.29 20.52 15.5 32.48 32.4 37.17 33.45 17.76 16.95 11.91 15.66
424.88 447.03 430.99 459.17 430.89 471.73 400.26 402.61 376.19 380.86 366.33 391.69 343.8 372.37 442.68 341.87 332.88 504.23 360.01 239.77 452.96 173.3 313.33 311.88 573.94 450.09 554.7 532.08 333.57 305.96 385.55 439.93
19.95 22.49 24.86 25.16 25.35 27.19 17.81 19.96 19.12 18.05 16.11 16.35 26.33 16.1 19.8 26.77 17.04 13.72 25.35 14.0 3.72 1.09 20.43 20.38 32.08 31.77 24.38 27.05 13.33 13.69 9.57 12.21
7.93 43.14 78.4 147.19 205.77 200.71 131.59 51.65 17.13 7.42 4.97 3.74 39.31 32.74 57.44 80.32 97.81 37.4 73.98 28.57 41.53 14.14 110.33 85.53 272.49 115.74 292.55 348.97 15.24 17.55 7.93 16.44
19.83 25.56 28.79 27.06 30.98 27.95 22.75 22.94 23.46 23.03 20.88 18.41 21.16 32.62 35.2 23.76 23.78 23.13 20.68 19.71 6.55 11.18 37.24 34.43 17.3 25.36 30.02 34.91 18.69 19.72 10.41 11.32
44.27 37.4 66.22 69.31 61.41 74.87 66.27 22.12 18.92 11.78 20.61 15.16 54.46 22.38 36.52 43.43 32.09 31.49 14.78 3.75 10.14 13.92 42.64 50.45 41.88 7.27 15.86 14.82 10.14 12.98 7.74 6.81
21.85 31.76 36.14 44.19 45.57 49.77 38.66 37.71 29.93 28.5 24.11 22.9 18.28 27.52 54.55 21.02 26.88 21.42 22.37 15.91 33.41 15.7 26.38 25.24 60.96 22.8 41.26 42.95 16.94 18.78 11.65 10.16
28.87 36.34 39.53 42.42 41.3 44.01 38.03 36.38 38.34 31.56 31.23 29.42 38.61 54.88 52.32 40.71 30.39 26.83 43.81 33.24 24.55 15.7 65.43 94.65 51.62 24.96 28.44 33.92 29.92 32.67 14.96 15.83
24.06 29.34 36.86 75.76 122.14 122.67 86.03 56.96 39.66 34.23 30.62 24.35 80.29 75.8 85.48 72.17 48.54 25.74 64.07 17.97 59.81 3.36 67.02 59.78 139.56 68.34 65.0 72.11 24.92 26.79 18.52 28.11
201.03 228.8 243.92 222.68 219.51 259.93 201.88 175.15 194.47 187.91 185.27 156.67 367.18 205.16 206.02 292.09 98.0 81.71 93.76 380.56 169.63 192.35 214.31 202.46 486.39 143.27 183.19 213.15 82.78 106.46 62.14 59.62
63.48 87.06 110.59 140.72 168.33 181.02 184.52 172.66 112.18 99.23 67.26 69.27 80.7 127.83 171.69 92.78 101.18 78.29 102.05 5.28 16.23 3.9 144.11 136.17 37.92 134.96 153.52 139.7 79.83 84.64 87.35 107.34
82.64 94.91 98.8 94.54 111.66 107.99 103.87 90.78 86.14 79.7 78.68 70.09 139.91 263.97 167.21 176.6 92.12 111.49 133.41 54.13 56.26 44.11 161.36 171.14 89.42 116.11 166.59 159.02 78.52 88.94 92.91 102.61
26.32 61.14 80.3 124.2 105.54 119.4 148.12 78.88 106.49 66.81 52.52 32.93 13.35 120.28 3.0 36.79 32.49 20.76 37.69 6.69 88.98 0.14 7.62 14.47 158.41 20.89 180.52 150.24 29.24 44.71 63.6 104.44
32.81 54.09 66.21 65.8 64.71 76.16 79.52 40.09 25.83 24.69 23.88 20.22 97.41 191.72 68.2 78.4 37.88 66.82 75.52 8.96 41.77 4.82 97.72 104.62 35.05 52.37 115.1 117.8 27.11 27.5 17.85 20.81
36.15 44.58 49.45 49.05 50.61 61.24 50.2 46.78 41.66 35.73 31.06 29.76 40.43 43.73 34.15 51.46 35.2 29.46 38.99 11.22 15.19 3.93 50.61 54.19 66.56 27.83 44.82 41.82 25.73 28.21 34.69 46.49
37.87 41.62 74.56 135.88 179.39 164.68 188.47 183.13 150.64 104.98 78.45 55.22 147.06 116.58 209.24 88.33 108.45 48.9 77.45 10.72 23.7 16.13 114.56 110.0 58.74 262.84 139.72 159.92 99.83 108.05 66.24 75.83
59.13 137.13 189.47 260.78 237.76 193.55 161.5 99.03 79.98 53.88 45.68 39.9 113.75 261.35 71.86 100.9 55.8 41.5 119.58 15.38 41.26 7.6 72.97 61.85 165.17 87.56 122.42 103.3 39.74 44.75 74.4 85.24
17.54 24.25 23.45 31.49 50.53 59.35 41.59 35.16 26.79 19.54 18.18 15.13 24.13 32.83 32.2 30.2 33.06 20.2 34.54 8.41 13.56 17.35 29.67 27.28 40.1 31.76 54.1 57.52 23.55 24.64 9.96 9.83
153.07 162.77 167.87 175.28 182.3 171.25 170.05 195.25 195.51 195.71 188.36 179.81 192.11 176.97 154.54 179.12 107.38 83.48 163.94 115.21 68.53 16.39 157.0 166.25 226.41 264.13 170.69 180.48 123.1 126.84 145.32 154.21
2.91 3.86 5.69 4.65 4.66 5.98 4.62 4.09 4.44 2.87 3.07 3.18 2.05 2.77 4.13 3.11 1.51 0.37 2.82 1.76 0.41 0.75 2.11 2.43 5.1 4.07 5.88 6.21 1.59 1.99 0.7 0.77
7.53 9.24 8.37 11.63 13.06 13.62 12.92 11.58 10.2 10.72 6.96 7.5 13.89 12.32 7.92 15.77 5.09 5.5 6.84 8.83 0.9 2.42 8.03 10.77 20.62 10.9 8.41 11.53 3.85 4.27 2.1 1.8
49.27 52.4 41.3 42.2 43.61 41.18 32.06 33.16 38.1 39.23 41.62 38.21 47.21 45.53 48.16 52.94 41.56 40.46 43.6 29.04 21.84 15.08 32.73 32.28 36.64 50.84 53.45 52.43 29.26 33.86 27.42 27.34
24.61 45.39 73.87 102.8 133.28 133.21 88.6 53.7 38.83 30.63 26.12 17.84 80.56 116.41 111.03 111.65 80.96 59.79 68.89 52.45 26.02 7.59 96.98 85.41 38.73 48.86 135.35 173.22 46.95 61.85 13.02 18.46
72.04 108.53 160.83 229.39 264.42 253.86 262.13 213.63 161.48 129.7 102.7 84.51 143.96 215.58 205.37 123.01 164.2 85.68 123.0 51.22 77.49 37.78 185.83 182.4 290.39 140.65 226.62 220.44 110.51 120.08 73.87 100.3
322.23 487.08 591.99 688.77 908.35 1022.08 807.46 695.97 465.45 395.6 342.65 283.09 536.52 699.94 253.03 732.58 432.65 515.14 800.21 289.87 609.17 94.88 753.54 677.8 1453.87 445.01 823.97 808.2 346.86 382.97 434.16 542.69
65.78 71.32 69.75 63.36 70.35 65.0 56.4 64.04 57.8 59.82 62.7 52.8 94.13 86.28 44.0 101.4 44.09 41.41 86.38 59.89 35.52 46.44 65.04 75.02 58.56 113.0 82.37 76.22 46.64 48.71 48.01 51.4
274.14 452.06 369.48 339.83 352.35 382.18 366.57 334.01 328.61 331.37 323.03 290.99 463.02 348.28 231.72 462.34 242.79 103.1 461.11 237.45 154.38 68.66 393.31 433.51 343.31 554.38 385.69 419.45 318.66 417.41 267.12 224.83
5.21 10.64 8.01 12.11 12.07 13.84 11.04 9.59 7.98 6.45 6.91 5.99 12.35 7.16 8.67 14.17 6.59 3.94 5.89 1.15 4.09 1.19 12.79 15.99 20.03 8.43 12.68 11.91 3.91 4.29 3.68 2.42
11.43 12.42 14.17 14.95 11.65 15.01 11.59 13.73 13.12 13.16 12.83 13.05 14.41 7.38 31.8 14.33 10.55 9.22 13.73 7.06 12.17 5.9 20.45 37.94 17.58 15.24 12.74 16.93 13.18 13.35 8.8 9.04
5.82 5.78 5.68 8.22 11.62 8.12 7.5 6.87 7.22 5.41 4.16 3.8 4.3 4.82 8.91 6.39 3.77 3.27 6.87 3.03 5.69 1.47 4.06 3.63 7.92 7.13 7.35 9.15 2.91 3.22 2.07 1.94
24.06 38.38 38.91 44.14 55.75 59.44 40.68 26.54 19.7 20.72 15.49 16.24 17.37 96.26 3.13 55.66 53.3 33.43 36.01 9.15 14.91 0.22 21.76 11.42 42.45 62.4 77.2 65.62 31.81 25.68 20.04 8.17
4.53 13.69 28.24 48.97 108.5 102.38 134.86 36.09 22.76 8.6 7.34 2.43 37.28 68.04 9.88 29.21 3.14 4.89 4.0 8.94 0.54 0.0 12.19 27.14 35.55 0.97 9.24 16.95 2.98 9.53 2.09 6.34
18.76 22.77 33.34 37.35 44.28 44.93 43.62 42.07 35.35 32.39 30.66 20.87 24.87 31.09 43.64 27.3 26.32 16.66 28.92 5.85 23.64 10.6 35.76 38.94 28.68 33.04 44.48 40.48 20.01 22.46 18.16 18.57
107.49 198.85 138.65 111.99 107.53 131.63 149.09 94.81 77.58 86.21 84.97 94.98 332.73 288.03 70.5 239.54 47.87 52.43 54.13 194.33 97.36 208.86 60.91 77.83 319.95 72.49 168.51 75.02 59.01 42.81 106.17 58.33
4.26 8.75 15.31 16.97 16.09 14.11 13.5 7.1 7.29 6.85 6.48 4.67 9.54 13.45 18.63 8.49 9.08 3.04 9.69 0.08 11.6 0.31 16.38 32.41 21.33 15.84 12.88 18.57 4.18 5.14 3.1 4.28
21.43 22.78 22.92 26.18 27.64 24.79 25.62 22.11 22.53 22.57 20.47 20.04 24.23 20.92 24.24 27.03 14.99 10.9 22.92 16.34 7.9 22.04 17.57 17.49 43.53 24.81 24.31 24.52 17.09 18.47 13.07 12.14
7.92 10.31 8.4 14.83 12.61 18.27 15.45 14.59 14.08 10.62 10.01 8.27 9.92 13.06 15.67 11.18 9.11 2.96 12.74 4.66 5.66 2.52 12.96 11.66 17.27 13.79 23.9 23.14 6.39 7.63 7.0 9.23
11.38 21.15 32.11 46.94 51.77 57.93 56.49 35.99 31.42 24.15 18.08 15.03 36.57 108.43 18.87 28.55 47.25 9.26 10.28 7.1 27.34 0.72 45.62 45.95 22.27 37.91 61.89 70.62 26.42 26.55 23.07 28.14
3.98 6.02 7.63 11.47 8.26 9.92 13.01 11.27 7.95 6.71 6.07 3.44 3.2 20.89 13.43 3.48 5.58 8.22 1.2 0.44 1.55 0.0 13.6 14.6 1.22 7.94 10.78 12.49 3.29 3.16 2.85 1.85
1.24 2.42 1.34 1.5 1.69 1.97 0.97 0.89 1.39 1.51 0.98 1.78 1.94 2.16 1.0 2.77 0.72 0.0 1.4 0.36 0.0 0.0 1.63 2.23 5.53 2.15 1.42 1.07 0.97 0.61 0.53 0.31
2.98 4.52 4.53 6.02 12.74 15.74 12.42 11.14 5.54 2.96 3.15 2.98 5.3 4.81 4.28 3.66 12.17 4.97 9.51 8.82 7.22 4.66 12.87 7.91 12.1 7.74 14.32 18.28 7.56 6.97 3.16 2.04
0.03 0.1 0.45 2.31 3.18 6.01 1.8 1.41 0.56 0.06 0.06 0.06 0.0 0.0 0.0 0.06 0.0 0.0 0.11 0.0 0.0 0.0 0.95 1.48 0.24 0.38 0.74 0.0 0.05 0.11 0.49 0.1
66.77 87.4 100.4 123.91 151.25 162.78 125.85 122.42 66.84 56.4 45.88 43.26 73.42 62.25 116.44 77.5 81.77 64.24 88.98 39.69 38.2 25.24 94.11 93.37 199.38 120.5 256.55 234.97 51.05 56.0 69.4 81.86
48.32 67.85 77.3 92.26 102.81 84.92 69.42 44.45 43.52 37.93 31.22 26.14 37.17 57.87 54.5 50.4 53.63 15.36 57.2 33.98 22.95 10.16 35.89 33.89 79.09 53.22 62.05 60.18 29.37 35.42 45.3 41.54
14.68 22.09 36.69 48.41 67.07 62.51 56.74 38.02 27.46 20.34 17.37 12.62 56.65 68.62 21.2 43.97 25.67 21.48 46.2 9.82 15.57 3.71 42.71 42.62 33.56 41.97 43.74 44.94 17.81 20.65 8.35 12.44
84.4 111.98 157.26 211.89 308.74 298.1 396.59 229.04 224.96 141.86 131.21 82.05 184.24 240.93 243.84 72.7 72.7 32.56 182.79 8.18 4.1 4.77 64.01 141.1 34.53 132.21 222.13 300.79 71.09 116.11 30.87 34.24
104.82 274.45 384.23 550.82 799.1 1007.86 1021.42 649.42 304.17 191.54 123.05 105.78 288.35 729.75 299.48 566.73 329.26 266.84 385.14 60.6 364.54 43.31 437.81 322.09 773.76 370.48 1314.73 1452.75 232.09 256.3 152.37 150.38
9.04 11.83 12.43 18.34 17.82 19.12 16.47 14.12 13.66 12.49 10.4 11.06 6.11 10.81 15.61 7.63 8.16 7.61 11.71 1.77 2.25 1.01 10.06 10.72 18.27 10.6 16.35 15.56 5.36 5.8 5.69 5.63
50.08 66.94 74.02 88.74 98.48 76.15 79.59 43.91 40.34 41.79 30.11 33.85 32.51 53.93 46.07 40.98 33.65 24.45 49.47 16.78 48.42 5.41 30.3 26.91 48.03 62.85 61.28 58.12 24.48 27.59 38.19 38.73
18.05 18.65 22.34 29.93 38.65 41.68 33.41 36.94 31.81 26.49 18.59 18.88 29.32 24.44 13.44 38.86 27.69 19.36 38.95 7.16 7.58 2.58 35.77 36.69 54.85 29.92 32.36 35.86 27.27 28.61 13.9 17.27
3.8 6.3 4.9 7.07 12.37 11.89 6.33 5.05 2.88 4.01 2.3 1.84 4.45 1.64 1.73 6.39 7.72 6.49 10.14 4.36 5.38 0.92 11.16 9.77 15.51 4.88 11.19 14.11 3.69 3.43 3.02 2.8
21.23 38.25 44.45 57.6 72.38 76.01 35.08 28.51 20.69 20.27 17.18 15.33 45.45 33.21 41.07 54.13 47.81 16.06 79.96 8.51 45.47 17.24 52.83 49.98 139.73 40.04 53.75 65.29 20.37 21.7 13.58 19.57
30.91 29.69 36.05 41.23 56.18 47.85 33.82 46.54 26.37 28.23 27.36 21.76 56.62 31.36 26.04 56.68 29.2 25.82 47.85 26.09 9.11 12.91 39.88 48.2 106.83 33.75 32.88 38.61 32.6 30.19 28.42 30.46
31.02 37.24 37.63 36.39 40.07 42.97 39.21 36.21 30.73 31.42 26.37 25.55 33.04 44.45 24.14 33.82 26.46 27.82 29.1 7.2 39.09 0.81 24.82 26.28 49.8 32.97 47.06 45.97 22.92 21.55 37.65 34.69
16.22 27.02 25.44 36.29 29.47 30.72 25.83 27.93 27.16 27.87 21.96 17.89 23.81 22.81 35.84 21.05 24.18 12.73 13.49 8.44 2.21 1.51 28.45 26.61 32.05 40.05 32.98 28.13 13.62 14.68 8.99 11.92
11.89 14.17 15.68 17.35 21.08 20.93 20.97 22.53 21.53 14.77 15.09 11.74 19.25 29.45 42.33 22.39 18.36 13.08 26.27 8.82 22.92 11.87 19.21 20.63 17.46 22.29 25.27 30.38 16.77 19.19 10.92 9.36
2.47 4.46 5.74 9.78 11.23 14.02 11.51 11.75 4.84 4.36 3.69 2.92 8.85 12.99 22.87 10.24 5.92 3.62 7.36 2.39 10.9 5.7 13.23 17.61 18.66 4.18 13.21 16.23 6.65 7.72 2.39 1.66
33.44 43.34 45.98 68.48 110.75 144.81 91.61 56.66 45.23 31.32 32.5 27.19 75.07 147.05 75.44 100.2 62.12 66.93 81.57 8.62 63.62 9.24 121.52 120.73 112.87 35.83 161.02 173.68 38.39 46.95 24.31 26.61
6.35 7.17 9.8 11.12 15.58 20.18 15.07 14.11 11.35 9.95 9.56 7.35 9.68 8.4 10.66 11.29 9.43 6.24 8.57 0.67 8.71 4.04 10.83 11.3 12.66 11.0 19.32 19.86 6.95 7.58 7.52 7.68
4.97 7.04 9.28 13.68 14.47 12.2 8.75 6.6 6.37 5.13 3.63 4.12 4.67 9.26 4.57 7.7 1.94 0.69 4.1 0.0 5.33 0.0 2.0 1.22 19.73 5.48 10.53 12.46 2.07 1.63 0.84 0.69

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)