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Heatmap: Cluster_201 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
65.01 68.16 92.08 103.08 114.24 128.29 152.89 148.78 135.87 138.96 125.36 107.79 90.61 55.62 81.15 100.25 73.89 47.37 104.13 43.91 111.64 49.01 84.8 86.8 32.99 356.19 186.2 174.14 76.64 70.42 78.9 107.91
25.58 28.06 32.76 29.23 28.66 24.61 32.6 40.93 40.8 48.65 42.42 29.81 49.66 26.82 17.41 44.85 22.08 9.03 23.09 11.55 2.07 3.18 38.03 32.04 2.41 58.58 19.38 20.6 21.12 21.92 29.1 24.85
23.41 26.93 32.31 30.97 38.01 29.0 31.13 46.29 47.29 47.75 43.64 30.11 66.29 25.8 18.39 52.73 28.11 14.39 25.98 14.77 11.6 10.46 49.42 42.25 10.06 82.99 26.87 21.74 24.68 25.08 36.32 31.8
32.34 28.09 28.65 33.34 38.3 36.0 33.42 42.06 38.55 52.8 50.35 41.21 27.97 23.8 28.9 36.82 25.08 31.7 38.54 6.55 14.88 5.18 30.91 31.9 20.84 162.29 56.33 60.95 27.26 29.24 23.49 23.54
30.01 27.32 35.24 31.15 33.7 29.46 39.78 42.62 41.76 49.58 49.56 43.26 31.52 25.89 37.17 35.14 19.29 18.26 32.95 23.56 10.97 5.2 23.99 27.05 16.34 72.75 42.76 42.66 27.31 26.43 29.0 30.78
45.79 40.58 41.61 48.1 51.35 47.8 46.68 57.11 54.09 55.87 55.97 48.79 43.58 42.33 45.94 44.51 30.88 22.21 42.85 4.36 15.77 8.08 36.66 39.0 42.13 108.73 67.53 61.06 32.59 33.35 33.47 33.48
97.39 96.56 97.87 97.65 97.65 87.6 89.34 98.84 98.84 100.9 101.88 92.39 122.28 105.62 93.81 115.94 64.39 50.91 90.14 3.93 1.67 13.74 89.35 101.66 20.59 234.49 192.19 205.85 72.34 75.44 82.51 75.0
19.85 19.92 21.7 27.43 26.82 26.19 29.36 33.6 31.47 30.56 28.3 23.96 23.05 23.32 27.59 28.6 17.34 9.68 36.32 2.78 1.17 0.92 19.32 19.86 3.92 53.5 37.76 42.45 23.04 24.19 19.64 18.41
20.01 16.1 13.88 17.82 15.83 19.54 20.43 25.51 27.33 24.19 22.79 23.32 27.6 21.91 26.04 33.94 11.46 7.94 23.27 17.12 2.01 1.2 14.2 18.3 5.78 57.4 42.32 39.79 16.47 17.84 11.59 10.28
90.55 78.28 84.29 93.04 94.9 87.86 92.68 103.61 116.28 129.06 115.67 101.93 140.61 76.15 11.65 104.54 41.73 63.38 91.99 5.18 12.58 2.68 58.73 69.74 40.07 190.81 93.5 89.88 53.23 56.14 51.23 79.27
85.56 68.83 82.38 85.54 93.91 76.3 74.74 132.98 121.18 129.7 122.66 119.71 103.9 76.37 17.61 111.3 37.14 43.77 98.69 19.44 62.61 14.85 76.28 83.08 54.78 380.61 162.22 147.08 79.73 79.64 63.32 77.07
42.18 49.3 56.7 74.18 67.72 60.17 66.81 69.23 70.45 67.8 60.25 52.71 79.88 42.56 44.75 64.55 57.77 28.32 51.57 9.3 23.84 8.41 62.46 61.44 52.79 181.27 98.55 100.82 55.63 57.4 36.86 43.55
59.68 45.56 51.35 64.36 63.11 55.22 58.43 96.31 93.79 97.54 91.03 79.17 88.86 105.79 73.59 87.89 28.12 20.48 65.78 4.57 22.31 4.34 47.3 58.04 48.1 272.4 147.37 115.67 46.11 46.36 55.54 78.08
59.46 54.73 51.06 60.77 59.57 61.34 55.23 65.17 67.28 70.48 67.15 67.46 57.61 47.27 59.08 64.34 43.82 27.65 65.36 8.02 17.61 20.25 46.57 49.59 33.02 126.75 88.09 90.29 47.21 47.75 46.15 42.46
38.08 36.95 40.17 38.14 42.96 39.44 44.53 41.62 36.94 39.66 42.6 33.62 36.05 24.51 34.4 43.11 26.39 24.57 40.32 19.07 2.92 1.03 29.93 31.91 16.08 86.59 73.99 80.39 28.72 32.57 24.18 24.94
104.06 109.11 102.44 114.49 104.61 100.82 100.34 117.18 125.3 129.31 128.63 118.34 146.93 127.15 92.5 136.58 60.35 51.48 84.17 30.57 22.59 29.44 88.12 97.07 107.14 304.09 188.4 190.56 60.78 64.7 58.45 61.74
125.27 129.09 134.48 149.98 160.28 157.14 160.53 172.98 138.75 140.19 133.35 119.93 99.12 78.44 99.69 112.61 89.46 47.96 110.75 28.02 27.97 20.38 88.31 88.12 73.76 263.62 272.48 277.32 91.11 90.42 98.06 80.1
10.85 10.31 11.82 17.42 22.69 22.15 20.27 22.2 18.16 17.17 17.23 12.16 19.61 23.03 15.34 26.59 12.6 9.03 31.43 0.9 2.65 1.79 18.67 19.35 17.1 97.49 42.92 42.32 15.42 16.6 11.79 14.61
88.36 82.1 82.99 90.71 88.98 87.04 85.44 100.49 86.58 88.06 88.13 83.92 81.4 88.24 87.84 88.67 47.46 37.19 77.31 31.32 20.25 35.07 63.34 67.17 66.0 123.54 120.04 120.89 48.8 51.4 65.8 68.19
75.43 65.35 78.12 82.19 83.61 74.4 81.24 94.49 98.56 113.76 103.52 84.04 130.3 67.9 11.09 100.14 39.35 24.98 93.11 29.67 27.32 21.24 56.7 58.3 32.2 189.34 93.49 95.14 53.05 53.89 53.02 77.34
60.71 50.0 44.73 47.94 49.42 49.78 42.15 60.79 63.36 67.14 66.61 69.58 51.42 29.13 20.39 45.05 27.41 27.17 32.8 12.95 20.29 3.76 40.72 47.38 40.18 136.66 66.74 65.19 30.77 31.64 23.75 20.11
58.3 46.44 39.82 46.33 48.83 40.13 39.45 55.63 54.85 60.77 66.58 60.72 53.97 43.7 32.31 54.1 29.44 13.31 38.37 6.76 18.5 9.01 47.99 54.64 40.06 183.39 85.45 93.26 34.47 33.79 25.24 22.13
5.69 5.32 4.99 6.99 7.46 5.98 6.57 7.77 6.66 7.93 6.98 6.12 7.03 4.58 6.99 7.61 4.95 4.0 10.53 0.21 3.51 4.7 5.28 5.31 3.15 19.8 13.74 12.55 5.49 5.41 5.64 7.35
34.19 32.14 30.35 31.88 34.08 28.05 29.03 36.88 31.71 36.62 38.57 33.47 25.23 24.56 18.51 31.23 20.66 18.01 30.76 8.61 8.6 11.66 23.47 23.75 21.89 70.94 43.08 49.86 22.95 24.83 17.29 17.34
30.54 25.71 34.48 33.42 32.08 28.59 26.78 42.7 37.13 40.46 42.76 36.66 38.65 28.72 20.85 42.41 23.18 17.48 40.8 0.0 0.0 0.0 29.36 28.13 1.6 99.02 57.09 60.24 28.95 30.46 33.71 40.14
23.73 23.52 23.71 25.04 21.71 20.03 20.27 28.28 26.09 31.99 29.51 26.5 31.03 17.68 13.69 34.14 10.44 7.47 23.72 3.59 1.83 5.56 16.52 16.14 4.61 52.83 23.72 22.91 19.68 19.37 17.96 19.89
88.75 83.45 85.73 88.58 85.99 81.9 95.59 113.96 115.37 119.14 118.11 112.49 97.79 95.38 73.17 119.5 60.24 50.9 101.73 32.41 32.96 9.66 75.74 81.73 50.55 211.45 137.88 139.28 78.89 78.79 83.8 86.64
21.14 27.12 27.18 29.37 33.8 32.59 33.91 40.47 33.67 38.02 36.75 31.36 24.65 20.36 29.73 27.76 24.16 13.95 33.07 4.81 3.25 5.56 23.31 23.5 22.26 78.4 62.9 69.17 28.01 28.29 18.79 19.56
6.85 6.98 6.75 8.53 7.31 7.4 6.18 10.8 11.08 9.95 10.8 8.11 5.91 4.83 7.61 8.99 6.32 3.51 11.83 0.06 0.39 0.08 7.14 7.06 3.16 31.83 12.33 12.35 7.37 7.47 8.47 9.93
12.04 10.98 10.85 13.15 12.71 11.43 13.68 16.62 14.43 15.47 13.07 11.51 11.19 8.88 15.73 15.68 8.86 3.89 15.3 0.0 0.0 0.0 12.13 12.73 0.0 36.3 23.81 26.09 11.14 11.47 7.18 6.5
7.01 6.56 7.11 6.26 6.15 6.2 7.61 8.72 7.58 8.87 7.4 7.11 7.01 4.15 3.02 8.9 3.26 2.02 5.79 3.33 0.95 1.23 4.88 4.75 1.23 14.61 9.24 9.1 4.9 5.15 3.88 4.06
5.85 4.3 4.27 5.94 7.41 6.59 7.86 9.28 8.64 8.88 7.94 6.65 6.29 4.18 9.39 7.66 4.08 3.13 9.98 0.92 1.43 1.77 5.21 6.61 3.47 22.85 14.9 14.29 5.18 5.72 3.71 3.36
6.52 5.36 5.19 5.34 5.11 4.88 4.13 5.53 6.29 7.35 8.07 6.44 4.04 5.99 4.01 2.74 2.19 2.49 4.87 0.12 1.47 0.02 4.36 3.98 0.91 11.88 7.55 7.43 1.97 2.07 3.14 3.75
55.95 49.66 46.1 54.79 54.97 55.0 49.95 60.07 59.08 62.41 60.57 57.23 44.24 40.88 50.06 50.93 33.87 22.43 44.12 5.89 23.89 9.14 39.11 38.9 36.61 112.7 88.23 86.69 32.73 34.26 40.98 42.22
49.07 50.37 53.2 52.52 60.1 47.67 60.77 60.43 57.32 59.14 62.92 51.01 58.39 39.19 41.65 67.0 39.67 40.53 56.92 25.32 16.09 14.7 48.35 49.79 17.68 122.83 100.26 97.31 45.24 47.07 47.52 48.35
5.52 6.46 6.76 8.09 7.89 8.03 8.22 8.87 9.88 8.85 8.46 6.29 6.63 3.82 6.54 7.5 5.57 6.72 6.38 0.0 0.83 0.0 5.16 4.49 2.93 25.25 12.85 13.47 5.37 5.33 6.82 6.06
20.03 18.82 15.96 17.7 18.98 17.24 18.23 20.69 20.33 21.96 20.37 20.13 18.3 10.54 13.76 21.39 11.62 7.68 18.88 0.36 0.16 2.11 13.65 12.5 5.11 49.31 31.23 31.05 15.24 15.78 15.94 16.47
9.84 8.3 7.7 8.58 9.45 7.97 5.93 10.62 8.96 7.88 8.48 8.94 11.27 9.44 7.71 11.98 4.45 2.51 11.34 0.0 2.77 0.39 7.09 7.47 8.73 35.82 25.34 22.89 5.56 6.46 7.51 9.42
23.42 23.93 20.75 22.22 24.21 22.74 24.59 30.46 31.45 30.96 33.35 32.22 23.33 13.41 14.41 24.09 15.47 6.67 23.64 8.24 10.8 2.02 16.12 17.41 3.51 102.4 52.17 47.68 18.76 18.31 17.59 18.05
27.7 30.79 35.91 31.61 28.62 25.11 27.3 34.23 32.64 31.33 31.87 27.13 33.2 27.06 19.16 33.31 17.98 16.04 29.48 8.57 6.59 9.13 29.73 33.94 12.93 53.73 36.65 37.85 26.41 27.44 17.04 17.3
67.08 69.25 71.72 80.17 80.92 77.47 84.9 86.59 82.76 79.29 80.35 74.7 52.31 54.26 56.58 65.81 42.35 28.44 69.8 22.59 31.09 11.86 54.21 58.75 37.69 147.72 129.62 137.31 49.71 52.39 54.7 50.46
40.12 30.82 32.99 33.71 35.98 36.5 32.31 41.56 37.92 39.19 38.54 33.68 28.08 28.54 34.49 29.52 20.01 14.19 26.88 17.98 9.92 13.15 23.45 25.59 13.65 49.28 49.45 50.2 22.3 23.69 20.45 21.89
40.86 42.51 46.2 42.96 47.33 41.32 44.45 46.08 45.27 42.14 44.68 36.47 41.58 33.95 32.34 46.22 26.23 19.14 41.9 7.52 1.8 1.64 33.31 33.93 4.59 78.56 76.27 83.36 28.09 29.66 33.89 29.43
61.81 61.7 62.58 63.22 63.22 58.07 68.78 75.81 73.92 82.87 83.56 72.81 59.78 59.15 57.75 71.37 43.02 35.39 68.59 39.44 35.76 32.52 40.17 42.66 43.59 131.87 90.96 93.03 52.27 54.75 54.1 54.38
30.2 31.43 29.33 30.03 30.42 27.74 26.14 30.46 30.24 33.89 31.01 31.38 34.76 29.56 24.79 29.1 13.14 10.5 25.6 8.37 12.63 15.78 18.15 20.03 21.44 51.8 39.09 37.54 16.2 17.02 17.47 20.48
73.57 66.85 66.02 73.61 76.75 69.57 70.2 82.2 74.84 76.99 76.32 70.34 57.51 50.16 51.27 68.18 38.44 22.39 65.79 17.78 3.47 6.59 48.29 50.13 13.37 180.34 165.34 156.54 47.47 46.88 67.06 65.28
42.34 42.0 41.66 41.67 45.03 41.52 44.53 45.73 42.81 45.48 42.56 36.97 39.02 31.19 35.8 41.05 25.35 18.48 37.42 0.21 0.54 0.34 28.3 30.26 5.78 110.78 97.11 99.62 29.45 29.61 23.65 23.11
16.64 15.85 16.16 18.48 19.74 18.22 20.35 21.22 23.01 22.98 22.37 19.49 11.35 11.73 18.78 16.12 10.19 5.97 21.98 4.51 3.51 3.17 11.61 12.18 2.57 40.91 30.65 31.77 12.69 12.51 9.89 10.43
30.45 26.34 28.91 29.81 33.75 26.17 34.58 38.63 38.38 37.85 41.26 35.17 22.14 21.87 29.61 27.06 19.36 14.43 28.3 19.89 6.33 8.78 17.08 19.27 10.76 84.89 50.88 52.53 23.48 23.74 27.15 29.26
8.56 10.52 10.68 11.57 12.51 11.22 10.79 12.25 10.59 10.87 9.88 8.98 10.12 8.15 12.88 11.48 6.82 4.95 15.75 0.03 0.0 0.0 8.28 8.97 0.56 16.82 20.6 20.97 8.67 9.0 5.0 5.44
14.77 13.52 12.17 14.94 14.33 14.37 15.51 21.79 22.14 22.24 21.45 20.47 21.53 17.06 23.49 21.98 9.52 7.13 24.66 4.6 2.81 12.97 10.03 11.87 10.78 63.92 35.31 29.88 13.54 13.94 16.54 13.93
28.56 28.69 27.53 22.86 22.45 20.31 23.56 26.63 30.04 33.12 34.93 31.61 41.61 10.3 8.62 44.7 8.12 8.19 8.54 4.88 5.02 4.48 10.16 15.48 28.67 74.35 30.48 31.21 9.51 11.0 8.9 8.89
44.25 47.24 51.87 48.71 52.31 46.94 47.35 55.02 48.04 51.2 51.98 42.76 54.91 37.57 24.93 55.74 30.13 29.62 50.94 14.57 10.82 4.7 50.32 53.39 17.42 90.27 72.06 74.49 35.59 38.01 36.18 42.67
73.95 64.99 66.81 59.37 70.87 67.86 74.39 70.34 70.15 84.84 75.67 68.86 64.53 81.19 86.11 70.53 44.74 32.83 67.82 40.98 27.91 42.99 53.82 60.28 40.87 201.68 132.34 119.8 53.43 51.49 46.89 48.42
26.14 27.11 28.56 28.6 28.23 24.46 22.55 27.04 25.68 27.97 32.23 27.48 18.15 21.1 18.87 14.52 11.8 9.0 14.75 2.7 3.83 5.29 12.44 12.18 13.5 52.78 33.2 39.55 11.92 12.38 12.16 10.83
5.69 7.18 8.58 7.9 7.59 7.51 7.57 9.96 9.22 9.15 8.32 6.95 9.02 4.68 5.42 8.68 4.61 3.21 8.59 0.2 0.22 0.18 6.46 7.41 2.15 22.07 12.84 13.68 5.49 6.15 3.94 3.8
25.44 25.61 24.11 25.01 25.08 20.91 18.93 22.12 25.89 25.85 27.21 25.25 23.0 24.0 15.94 18.33 12.83 5.83 16.47 2.93 3.73 0.75 15.1 14.94 14.96 54.99 32.49 34.78 15.49 16.27 12.54 11.64
19.56 18.36 16.97 19.98 18.98 16.27 18.1 21.37 22.69 21.89 22.42 20.03 21.25 18.12 9.66 22.91 12.25 5.71 15.92 3.18 1.46 0.94 19.12 20.36 9.11 52.21 30.21 31.92 13.93 14.99 12.82 14.06
57.21 58.68 54.67 60.84 68.44 60.78 61.2 68.04 58.91 61.98 60.69 59.73 52.24 47.45 35.44 62.06 33.19 26.07 53.93 7.71 9.08 5.06 36.98 39.13 19.15 114.24 104.21 113.99 38.53 40.12 33.23 31.33
63.04 60.06 71.89 79.98 76.0 66.29 60.27 87.36 87.49 80.12 83.61 68.66 117.3 49.36 55.73 76.67 32.85 21.58 68.24 2.65 3.7 0.65 39.72 40.76 33.41 156.91 129.42 107.32 43.43 38.6 36.08 53.74
14.37 20.47 22.0 22.22 27.12 20.39 25.61 28.97 27.21 26.63 22.78 21.3 17.41 19.75 27.57 28.8 15.98 12.93 48.53 0.29 0.37 0.19 16.13 15.58 9.37 91.37 31.6 32.79 21.85 23.12 22.72 23.9
38.47 36.17 43.35 37.28 38.43 39.75 37.01 49.92 49.4 57.98 46.59 39.36 52.17 22.64 17.61 53.88 21.65 18.37 35.95 5.9 7.53 0.61 31.18 30.36 26.48 64.87 31.01 34.08 31.78 30.12 31.42 31.52
19.48 17.96 15.67 19.46 23.67 21.87 22.77 24.29 26.72 25.26 25.92 22.0 28.67 17.74 30.88 32.81 15.62 11.77 27.87 11.35 2.85 6.57 18.37 20.3 6.8 56.27 31.49 39.74 20.57 21.22 10.72 11.51
17.5 19.84 19.85 23.66 28.31 24.1 21.88 23.26 21.64 20.94 19.9 19.02 21.25 14.17 18.25 29.23 14.54 7.42 28.9 2.92 1.0 0.31 20.27 21.93 5.23 43.11 38.78 40.54 17.97 19.41 10.4 10.68
28.35 24.64 23.22 25.17 31.35 30.26 24.3 31.52 31.35 33.09 30.54 26.3 42.41 24.81 26.2 39.6 13.95 13.59 23.48 3.62 6.3 8.27 26.32 38.08 11.37 58.48 50.69 55.34 14.91 18.04 15.99 25.46
26.18 25.24 27.3 26.71 27.73 26.3 29.93 34.92 32.42 37.5 37.24 33.36 32.82 18.58 21.75 31.99 16.34 14.37 31.16 12.22 19.51 18.05 17.89 20.74 30.02 63.95 42.5 44.73 22.59 23.57 22.77 23.71
95.66 92.69 104.35 106.67 110.65 86.58 95.94 134.12 128.8 131.96 117.68 100.64 143.66 81.12 50.33 171.85 46.89 44.46 126.7 0.09 4.74 0.1 91.99 131.69 5.07 310.33 158.65 141.6 69.12 68.0 99.47 105.76
69.04 74.88 68.8 68.92 73.57 70.56 69.55 68.58 72.63 73.28 78.22 66.38 84.0 56.03 49.12 78.59 50.44 40.19 67.75 11.66 23.3 8.28 58.76 63.66 42.45 127.86 133.29 134.25 52.89 57.53 51.72 45.96
85.36 82.19 80.8 85.12 88.5 87.73 98.2 98.45 99.66 102.02 106.73 97.77 53.55 59.16 85.71 66.41 58.36 41.41 74.54 22.84 32.47 20.09 55.89 57.79 39.82 153.41 116.68 113.81 58.03 61.96 61.77 62.19
18.48 17.49 17.35 16.69 17.02 15.93 15.91 17.68 17.58 16.47 18.04 15.46 12.8 13.63 12.07 15.81 10.46 5.93 18.66 0.31 0.41 0.4 12.6 11.65 2.87 42.83 29.16 29.59 13.16 13.72 11.25 8.59
7.86 7.29 7.39 7.4 8.76 8.63 6.87 7.41 8.46 7.95 7.28 7.59 8.96 6.08 6.35 9.23 5.12 0.8 6.81 0.47 0.85 0.0 7.28 7.49 1.4 14.44 14.93 16.24 5.98 6.84 3.8 5.37
5.31 5.02 4.84 5.48 6.26 6.51 5.49 8.66 6.02 7.04 6.01 5.75 3.94 5.49 3.54 5.8 2.75 4.32 6.04 0.02 0.26 0.06 2.8 3.31 5.01 29.53 16.04 13.36 3.33 3.43 2.98 4.31
54.63 54.88 54.63 53.35 54.2 46.6 53.9 68.95 66.63 67.86 70.95 61.54 69.78 42.84 41.34 75.42 32.1 27.03 56.81 5.62 0.96 5.55 47.77 43.89 4.79 141.97 80.23 85.93 48.7 53.84 36.56 39.55

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)