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Heatmap: Cluster_210 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.45 0.38 0.45 0.37 0.37 0.4 0.21 0.53 0.42 0.54 0.47 0.43 -0.17 -0.74 -0.2 -0.1 -0.33 -0.42 0.06 -3.78 -0.3 -5.97 -0.19 -0.21 -1.58 0.2 0.15 0.22 0.08 0.08 -0.32 -0.47
0.61 0.8 0.77 0.67 0.6 0.53 0.06 0.01 0.05 0.28 0.17 0.18 -0.29 0.31 -0.47 -0.3 -0.37 -0.39 -0.17 -2.88 -0.11 -2.08 0.17 0.17 -0.87 -0.94 -0.35 -0.32 -0.3 0.09 -0.18 -0.1
0.56 0.88 0.69 0.64 0.5 0.73 0.37 0.35 0.46 0.31 0.29 0.29 0.17 0.21 -0.15 0.34 -0.56 -1.09 -0.05 -3.17 -1.64 -0.99 -0.06 -0.2 -2.56 -0.55 -0.28 -0.04 -0.53 -0.34 -0.58 -0.49
0.73 0.59 0.42 0.5 0.42 0.33 0.29 0.58 0.67 0.8 0.69 0.75 -0.36 -0.34 -0.26 -0.12 -0.51 -1.17 -0.06 -4.91 -6.57 -7.59 0.03 0.08 -4.04 -0.02 -0.0 0.14 -0.05 0.01 -0.48 -0.44
0.58 0.51 0.54 0.41 0.39 0.24 0.38 0.48 0.63 0.69 0.72 0.58 -0.52 -0.53 0.32 -0.35 -0.11 -0.55 -0.38 -5.58 -2.37 -4.55 -0.29 -0.18 -1.3 0.38 -0.21 0.2 -0.23 -0.08 -0.44 -0.34
0.63 0.38 0.38 0.31 0.29 0.22 0.22 0.41 0.47 0.55 0.51 0.58 -0.2 -0.55 -0.41 -0.11 -0.51 -0.88 0.28 -2.67 -1.43 -1.72 -0.4 -0.32 -1.11 0.33 0.32 0.31 -0.13 -0.13 -0.15 -0.09
0.69 0.61 0.64 0.61 0.83 0.7 0.52 0.32 0.35 0.26 0.25 -0.05 -0.23 -1.13 -0.85 -0.11 0.06 -0.26 0.47 -2.47 -4.14 -6.15 -0.05 -0.31 -3.48 -0.07 0.06 0.33 0.05 0.19 -0.36 -0.49
0.95 0.71 0.51 0.44 0.39 0.3 0.39 0.56 0.44 0.36 0.42 0.35 -0.09 -0.55 -0.11 -0.21 -0.82 -1.19 -0.41 -7.35 -4.06 -4.42 -0.14 0.03 -2.54 0.13 0.76 0.86 -0.43 -0.36 -0.35 -0.36
0.64 0.57 0.68 0.46 0.56 0.47 0.17 0.09 0.33 0.34 0.3 0.13 -0.03 0.19 -0.92 -0.25 -0.18 -0.39 0.02 -1.31 -1.37 -2.08 0.36 0.34 -0.86 0.14 -0.1 0.22 -0.35 -0.2 -1.01 -1.11
1.14 0.89 0.82 0.55 0.8 0.79 0.12 0.34 0.55 0.71 0.57 0.49 -0.33 0.34 -0.5 0.21 -0.8 -0.71 -0.05 -7.8 -6.25 -6.83 -0.05 -0.07 -5.53 -1.57 -0.21 0.09 -0.84 -0.54 -0.6 -0.54
1.23 0.66 0.58 0.53 0.58 0.24 -0.07 0.46 0.25 0.29 0.4 0.36 -0.65 -0.45 -0.59 -0.27 -0.65 -0.62 -0.22 -3.47 -2.05 -3.37 0.25 0.36 -1.17 0.45 0.3 0.51 -0.04 -0.45 -0.9 -1.05
0.45 0.43 0.38 0.26 0.26 0.17 0.54 0.55 0.54 0.57 0.6 0.48 -0.46 -0.72 -0.53 -0.26 -0.4 -0.66 -0.31 -2.34 -1.44 -2.05 -0.17 -0.2 -0.36 0.23 0.25 0.27 -0.12 -0.15 -0.15 -0.01
0.79 0.42 0.32 0.4 0.58 0.24 0.32 0.31 0.55 0.68 0.8 0.73 0.26 -0.49 -0.6 0.44 -0.28 -0.34 0.11 -3.72 -4.66 -4.35 -0.21 -0.36 -4.93 0.7 -0.49 -0.34 -0.35 -0.37 -0.39 -0.31
0.55 0.36 0.37 0.22 0.25 0.32 0.19 0.35 0.4 0.58 0.42 0.37 0.23 0.1 -0.16 0.14 -0.46 -0.64 0.08 -1.12 -0.99 -1.13 -0.16 0.06 -0.76 0.11 -0.42 -0.24 -0.3 -0.34 -0.33 -0.32
0.63 1.27 0.78 0.31 0.35 0.44 1.04 0.65 1.38 1.67 1.34 0.65 -1.0 -0.39 -3.08 -1.69 -2.28 -1.2 -2.35 -1.41 -3.15 -2.7 -1.0 -0.93 -3.34 -1.12 -1.06 -2.08 -2.29 -2.31 0.85 0.34
1.12 1.16 0.9 0.62 0.78 0.45 -0.08 0.39 0.56 0.85 1.0 0.86 -0.09 -0.99 -1.57 -0.4 -0.37 0.17 -0.26 - -3.63 - -0.38 -0.31 - -0.51 -1.2 -0.94 -0.46 -0.83 -0.18 0.02
0.86 0.86 0.97 0.73 0.04 -0.1 0.13 0.26 0.24 0.51 0.37 0.48 -0.1 -0.66 -0.99 0.27 -0.72 -0.98 -0.49 -3.19 -0.81 -3.21 -0.28 0.06 -0.37 0.92 -0.41 -0.14 -0.6 -0.86 0.01 -0.14
0.57 0.69 0.31 0.36 0.39 0.33 0.6 0.46 0.61 0.86 0.58 0.75 -0.25 -0.52 -0.78 -0.02 -0.83 -0.72 0.08 -8.58 -2.98 - -0.54 -0.62 -3.19 0.44 0.48 0.42 -0.41 -0.35 -0.15 -0.07
0.89 1.6 1.04 0.69 1.22 0.99 0.83 0.36 1.13 1.37 0.95 0.41 -1.05 -0.7 -2.46 -0.77 -2.2 -1.42 -1.75 -5.27 -6.41 -5.55 -0.54 0.24 -4.84 -1.49 -0.24 -0.78 -2.83 -2.59 -0.49 -0.9
0.97 1.04 0.88 0.53 0.56 -0.18 0.21 0.32 0.07 0.55 0.38 0.39 0.51 0.99 -1.07 0.5 -0.38 -1.0 -1.55 - -6.48 - 0.28 -0.15 -4.32 -0.07 -0.2 -0.84 0.03 -0.16 -0.56 -0.44
0.46 0.55 0.6 0.54 0.56 0.19 -0.13 -0.19 -0.02 0.24 -0.2 0.06 0.1 0.42 -0.37 0.09 -0.08 -0.15 0.14 -3.75 -6.23 - 0.37 0.33 -3.19 -0.3 -0.11 0.05 0.16 0.43 0.29 0.36
1.26 0.96 0.99 0.75 0.62 0.38 -0.06 -0.06 0.19 0.47 0.84 0.77 0.02 -0.87 -0.41 0.39 -0.69 -0.97 -0.06 -4.93 -1.81 -3.78 -0.34 -0.29 -2.8 0.67 -0.53 -0.22 -0.77 -0.69 -1.13 -0.89
1.15 1.5 1.33 1.22 1.03 0.35 0.05 0.54 0.51 1.01 0.83 1.23 0.72 -5.31 -7.34 -0.68 -1.75 - -1.54 -2.98 -5.44 - -1.12 -2.22 -1.67 0.6 -0.0 -0.22 -1.47 -1.97 -1.13 -2.29
0.32 0.2 0.2 0.21 0.14 0.47 0.48 0.33 0.39 0.56 0.52 0.35 -0.1 -0.1 -0.45 -0.0 -0.67 -0.06 -0.0 -2.14 -1.55 -1.74 -0.12 -0.1 -1.02 0.6 0.42 0.35 -0.58 -0.5 -0.4 0.02
0.87 1.89 1.65 1.34 0.68 0.99 0.44 0.32 0.19 1.01 0.82 1.0 0.52 0.1 0.9 0.54 -3.08 - - - - - -5.35 -3.86 -1.35 -2.24 -0.27 -3.73 -5.33 -3.64 -5.28 -4.76
0.74 0.54 0.5 0.42 0.47 0.41 0.08 0.22 0.5 0.4 0.45 0.37 -0.43 -0.39 -0.28 -0.16 -0.08 -0.56 -0.09 -3.03 -1.77 -1.28 0.02 0.18 -0.42 -0.49 0.01 0.17 -0.04 0.2 -0.76 -0.49
1.32 2.0 1.78 1.55 0.88 1.05 0.39 0.27 0.93 1.0 1.02 1.3 -4.14 -3.79 -5.42 -3.95 -0.89 -7.34 -0.53 - -4.92 -8.87 -6.0 -6.73 -2.04 -3.21 -0.04 -0.68 -2.08 -2.03 -2.49 -2.39
0.68 0.53 0.49 0.41 0.37 0.29 0.13 0.29 0.35 0.46 0.52 0.35 -0.55 -0.57 -1.08 0.04 -0.3 -0.29 -0.11 -2.24 -2.07 -3.17 -0.09 -0.1 -0.65 0.58 0.07 0.3 -0.17 -0.02 -0.04 -0.11
0.64 0.49 0.21 0.4 0.55 0.24 0.27 0.42 0.82 0.66 0.79 0.52 0.62 -0.38 -0.86 0.56 -0.74 -1.18 0.84 - -6.86 - 0.14 0.08 -3.02 0.12 -0.5 -0.88 -0.2 -0.18 -0.66 -0.56
0.91 0.96 0.64 0.75 0.91 0.54 0.14 0.21 0.44 0.3 0.53 0.09 0.17 0.37 -1.57 0.49 -0.32 -0.35 -1.6 - -4.34 - 0.27 0.23 -4.86 -0.59 -0.32 0.1 0.03 -0.04 -0.62 -0.95
0.86 0.68 0.48 0.41 0.5 0.28 0.37 0.5 0.35 0.28 0.31 0.24 -0.24 -0.53 -0.24 -0.29 -0.7 -1.34 -0.42 -5.71 -3.49 -5.95 0.02 0.18 -1.36 0.34 0.85 0.9 -0.47 -0.34 -0.28 -0.5
0.81 0.7 0.91 0.68 0.0 -0.22 -0.23 0.7 0.62 0.53 0.48 0.34 -0.33 -0.85 -0.21 -0.52 -1.12 -1.13 -0.15 -1.89 -0.96 -5.02 -0.61 -0.42 -1.97 1.36 -0.41 -0.5 0.21 0.46 -0.79 -0.26
0.91 0.65 0.7 0.46 0.3 0.19 0.56 0.48 0.56 0.68 0.64 0.64 -0.11 -0.31 -0.78 0.07 -0.63 -0.92 -0.13 -2.97 -2.44 -3.16 -0.39 -0.37 -3.39 0.3 -0.11 0.03 -0.18 -0.06 -0.28 -0.4
0.57 0.4 0.42 0.27 0.32 0.36 0.35 0.41 0.35 0.44 0.4 0.33 0.0 -0.31 -0.18 0.09 -0.39 -0.69 -0.05 -3.23 -1.21 -2.72 -0.13 -0.08 -1.17 0.28 0.23 0.26 -0.14 -0.05 -0.11 -0.26
0.64 0.53 0.29 0.26 0.39 0.2 0.21 0.11 0.23 0.32 0.32 0.25 -0.53 -0.49 -0.47 -0.1 -0.17 -0.78 0.07 -3.54 -1.01 -1.0 -0.25 0.05 -1.03 0.36 0.66 0.92 -0.03 0.13 -0.79 -0.74
0.52 1.06 1.04 0.97 0.71 0.36 0.41 0.43 0.44 0.36 0.35 0.22 -0.44 -0.43 -1.3 0.45 -0.46 -0.93 -0.38 -3.07 -2.51 -5.39 -0.57 -0.64 -0.58 0.18 0.39 0.49 -0.43 -0.39 -1.31 -1.16
0.62 0.67 0.47 0.36 0.3 0.34 0.19 0.38 0.4 0.41 0.43 0.38 -0.32 -0.25 -0.11 0.0 -0.27 -0.41 -0.02 -1.35 -1.5 -1.07 -0.15 -0.22 -1.64 -0.09 0.13 0.19 -0.21 -0.09 -0.33 -0.42
1.08 0.82 0.83 0.6 0.52 0.5 0.09 0.51 0.54 0.71 0.87 0.74 -0.26 -0.69 -3.04 0.05 -0.96 -0.35 0.31 -6.86 -4.71 -5.71 -0.39 -0.83 -5.16 0.5 -0.3 -0.51 -0.31 -0.48 -0.28 0.08
0.66 0.61 0.78 0.46 0.27 0.08 0.18 0.4 0.64 0.81 0.91 0.69 0.26 0.18 -1.61 0.55 -0.66 -1.12 -1.02 -6.3 -3.88 -6.86 0.4 0.27 -2.96 0.55 -0.73 -0.48 -0.24 -0.26 -0.6 -0.49
0.33 0.32 0.31 0.33 0.61 0.77 0.58 0.69 0.49 0.43 0.11 0.08 -0.58 -0.37 -0.71 -0.48 -0.22 -0.03 0.33 -2.86 -3.55 -5.47 -0.17 -0.14 -2.7 -0.06 0.54 0.8 -0.06 0.02 -0.53 -0.15
0.61 0.82 0.93 0.62 0.89 0.77 0.3 0.38 0.28 0.32 0.42 0.26 -0.28 -0.01 -0.36 -0.15 -0.56 -0.19 -0.1 -2.96 -1.15 -4.0 0.12 0.05 -2.02 -0.66 -0.4 -0.35 -0.54 -0.51 -0.37 -0.27
0.78 0.83 0.74 0.84 0.67 0.32 0.28 0.37 0.17 0.56 0.3 0.4 -1.05 -1.24 -1.24 -0.36 0.12 -0.78 0.13 -6.55 -6.31 -6.05 0.15 0.08 -5.32 0.52 -0.02 -0.1 0.1 0.16 -0.01 -0.14
0.6 0.67 0.29 0.23 0.42 0.32 0.25 0.18 0.23 0.57 0.33 0.46 0.01 -0.15 -0.2 0.18 -0.57 -0.48 0.14 -2.68 -1.98 -5.82 -0.31 -0.33 -3.47 0.48 0.39 0.38 -0.27 -0.29 0.03 0.15
0.34 0.63 0.63 0.43 0.41 0.57 0.66 0.16 0.15 0.35 0.11 0.25 -0.08 0.29 0.24 0.19 -0.08 -0.43 -0.24 -2.67 -1.82 -1.08 -0.29 -0.15 -2.15 -0.24 0.11 0.2 -0.32 -0.13 -0.42 -0.45
0.73 0.98 0.88 0.82 0.56 -0.07 0.06 0.14 0.19 0.36 0.35 0.39 -0.89 -1.25 -2.27 -0.19 -0.87 -1.1 -0.33 -3.92 -1.29 -5.79 -0.02 0.14 -1.38 1.26 0.25 0.37 -0.33 -0.24 -0.25 0.02
0.63 0.44 0.31 0.41 0.42 0.46 0.16 0.42 0.49 0.58 0.42 0.4 0.17 0.42 -0.09 0.08 -0.11 -0.61 0.01 -2.3 -2.62 -4.52 -0.01 -0.14 -1.27 -0.43 -0.15 -0.38 -0.16 -0.07 -0.16 -0.2
0.51 0.46 0.51 0.42 0.34 0.39 0.16 0.18 0.37 0.53 0.43 0.36 0.03 0.09 -0.11 0.05 -0.42 -0.7 0.11 -1.34 -0.61 -1.23 -0.16 -0.27 -0.67 -0.08 -0.35 -0.42 -0.24 -0.28 -0.37 0.04
0.49 0.39 0.23 0.26 0.37 0.38 0.24 0.35 0.33 0.41 0.32 0.3 -0.17 0.03 0.08 -0.09 -0.45 -0.31 0.06 -3.69 -3.04 -8.6 -0.1 -0.2 -1.75 0.33 0.4 0.51 -0.18 -0.23 0.13 0.22

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.