Heatmap: Cluster_155 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Aerial tissue - Light - ZT1	Aerial tissue - Light - ZT3	Aerial tissue - Light - ZT5	Aerial tissue - Light - ZT7	Aerial tissue - Light - ZT9	Aerial tissue - Light - ZT11	Aerial tissue - Dark - ZT1	Aerial tissue - Dark - ZT3	Aerial tissue - Dark - ZT5	Aerial tissue - Dark - ZT7	Aerial tissue - Dark - ZT9	Aerial tissue - Dark - ZT11	Roots	Root elongation and differentiation zone	Root meristematic zone	Aerial roots and rhizophores	Shoot tips	Microphyll	Strobili	Shoot apical meristem - AC	Shoot apical meristem - Core	Shoot apical meristem - P1	Stem - Top	Stem - Bottom	Whole plant	Aerial tissue - Stress - Dark	Aerial tissue - Stress - High light	Aerial tissue - Stress - Cont	Aerial tissue - Stress - 37C 1h	Aerial tissue - Stress - 37C 3h	Aerial tissue - Stress - 4C 1h	Aerial tissue - Stress - 4C 3h
Smo100523	-1.96	-0.75	-0.56	-0.38	-0.53	-0.91	-0.61	-0.78	-0.69	-1.0	-1.13	-1.32	1.9	0.49	-1.75	1.61	-1.01	0.43	0.61	-2.17	-2.22	-4.59	1.67	1.76	-0.61	0.2	0.0	-0.05	-0.77	-0.65	-0.88	-0.32
Smo105781	0.05	0.22	0.1	-0.08	-0.24	-0.21	-0.43	-0.32	-0.21	-0.13	-0.1	-0.14	0.81	0.61	-0.86	0.99	-0.17	-0.03	0.17	-3.07	-0.32	-3.13	0.76	0.79	0.28	-0.2	-0.53	-0.63	-0.07	-0.07	0.19	0.22
Smo109547	-0.28	0.01	-0.2	-0.21	-0.06	-0.1	-0.43	-0.5	-0.42	-0.4	-0.46	-0.63	1.52	0.69	0.87	1.59	-0.97	-0.88	-0.33	-0.38	-2.12	-0.34	0.45	0.45	0.71	-0.12	-0.24	0.01	-0.59	-0.32	-1.69	-1.52
Smo111930	-0.37	-0.16	-0.07	-0.14	-0.02	-0.06	-0.13	-0.23	-0.41	-0.49	-0.36	-0.66	0.92	1.18	1.06	1.23	-0.26	0.04	0.5	-1.39	-1.97	-1.52	0.11	0.39	-0.56	-0.34	-0.06	-0.27	-0.1	-0.03	-0.44	-0.43
Smo116314	-1.63	-1.07	-0.66	-0.98	-0.28	0.48	-1.25	0.39	0.68	0.04	-1.7	-1.18	2.24	-0.45	-0.54	1.94	-1.64	-1.6	-1.13	-	-	-	0.76	2.17	-1.97	-0.1	-1.51	0.27	-0.2	0.35	-1.28	-2.74
Smo118648	0.2	0.12	-0.21	-0.09	0.02	-0.33	-0.56	-0.36	0.19	-0.13	0.07	-0.03	0.74	0.28	-0.52	0.83	-0.5	-0.38	0.38	-2.5	-1.55	-1.51	0.26	0.56	0.06	0.69	0.08	-0.17	-0.22	-0.1	0.33	0.35
Smo13166	0.37	0.72	0.2	0.08	-0.04	-0.32	-0.55	-1.09	-1.07	-1.16	-0.84	-0.4	0.85	0.68	0.41	1.25	0.29	-0.03	0.45	-3.56	-2.04	-3.45	0.42	0.68	-0.64	-1.36	0.01	0.41	-0.31	-0.03	0.34	0.3
Smo146031	-0.41	-0.29	-0.35	-0.21	-0.03	0.11	-0.51	-0.48	-0.35	-0.53	-0.57	-0.81	0.85	1.37	1.24	1.07	-0.36	-0.52	0.99	-1.47	-1.45	-3.95	0.31	0.14	0.58	-0.6	-0.31	-0.22	0.14	0.25	-1.03	-0.93
Smo148346	-0.58	-0.57	-0.71	-0.83	-0.58	-0.97	-0.9	-1.05	-0.67	-0.74	-0.81	-0.76	1.62	1.21	-0.6	1.62	-0.18	0.28	1.2	-0.44	-0.89	-1.15	0.12	0.35	0.12	0.09	-0.55	-0.63	0.05	0.1	-0.15	-0.28
Smo154323	-0.48	-0.32	-0.26	-0.19	-0.11	-0.17	-0.26	-0.12	-0.18	-0.27	-0.18	-0.38	0.74	0.28	0.88	0.65	-0.23	-0.35	0.25	-0.87	-0.48	-0.63	0.37	0.44	-0.18	0.33	0.04	0.02	-0.03	0.04	0.02	-0.06
Smo157772	-0.93	-0.91	-0.83	-0.82	-0.58	-0.75	-0.96	-0.92	-0.62	-0.66	-0.71	-0.95	1.12	0.91	0.54	1.28	-0.45	-0.51	0.81	-1.64	-1.51	-1.87	0.89	1.63	0.24	0.42	-0.14	-0.19	-0.1	-0.02	-0.4	0.12
Smo160379	0.16	-0.1	-0.1	0.03	0.14	0.32	0.08	-0.0	0.05	0.14	-0.05	-0.17	0.52	0.63	-0.19	0.76	-0.52	-0.77	0.37	-0.56	-1.65	-0.12	0.36	0.5	-1.95	-0.01	0.14	0.29	-0.29	-0.26	-0.28	-0.32
Smo163663	-0.08	-0.0	0.19	0.06	0.24	0.1	-0.59	-0.49	-0.26	-0.15	-0.04	-0.32	1.39	0.82	0.02	1.18	-0.56	-0.32	0.19	-4.29	-1.37	-1.08	0.48	0.89	0.1	-0.7	-1.0	-1.06	-0.4	-0.24	-0.19	0.18
Smo164273	-0.53	-0.17	0.04	-0.15	0.05	0.29	-0.0	-0.01	-0.42	-0.36	-0.41	-0.7	0.59	0.64	0.37	0.76	0.05	0.13	0.84	-0.86	-0.61	-0.39	0.49	0.63	-0.8	-0.55	-0.15	-0.02	-0.13	-0.08	-0.56	-0.37
Smo165600	-0.91	-0.45	-0.08	-0.01	0.26	0.27	-0.05	-0.58	-0.42	-0.57	-0.61	-1.27	1.11	1.3	-5.73	1.52	0.18	-0.26	0.42	-2.73	-0.34	-5.86	0.65	0.63	-0.99	-0.02	0.28	0.69	-0.25	-0.05	-0.92	-0.44
Smo171251	-0.26	0.14	-0.11	-0.23	-0.19	-0.3	-0.28	-0.84	-0.5	-0.59	-0.59	-0.87	0.59	0.95	0.73	1.5	-0.49	0.22	1.25	-1.65	-1.37	-1.75	1.04	1.1	-1.61	-0.24	-0.62	-0.3	-0.33	-0.15	-1.33	-0.96
Smo172574	-0.36	-0.61	-0.53	-0.43	-0.35	-0.45	-0.72	-0.27	-0.25	-0.22	-0.25	-0.33	1.8	1.07	-0.7	1.13	-1.18	-0.92	-0.15	-1.24	-0.66	0.68	0.28	1.01	0.25	0.24	-0.34	-0.31	-0.58	-0.51	-0.49	-0.59
Smo227141	-0.25	-0.23	-0.1	-0.11	0.13	-0.09	-0.31	-0.21	-0.34	-0.42	-0.37	-0.59	0.64	0.56	0.61	0.89	-0.19	-0.17	0.32	-1.82	-0.91	-0.23	0.32	0.5	0.17	0.11	0.18	0.05	-0.23	-0.13	-0.19	-0.02
Smo230187	-0.24	0.3	-0.05	0.11	0.27	0.02	-0.31	-0.28	-0.67	-0.73	-0.66	-0.74	1.39	1.54	1.25	1.2	-0.27	-0.04	0.59	-1.84	-2.46	-1.89	0.36	0.47	-1.11	-1.09	-0.73	-1.59	-0.37	-0.27	-0.87	-0.7
Smo230609	-0.35	-0.26	-0.01	0.12	0.09	0.08	-0.0	-0.11	-0.08	-0.11	-0.23	-0.41	1.33	1.28	1.15	1.2	-0.52	-1.3	-0.11	-3.36	-0.8	-4.58	0.01	-0.1	0.3	0.36	0.02	-0.11	-0.53	-0.41	-1.5	-1.37
Smo233250	-0.14	-0.1	-0.18	-0.05	0.02	0.01	-0.43	-0.28	-0.39	-0.34	-0.46	-0.44	0.86	1.02	0.87	0.88	-0.47	-0.53	0.59	-1.38	-1.26	-2.22	0.18	0.15	0.53	-0.02	0.12	0.1	-0.21	-0.21	-0.35	-0.12
Smo233752	0.11	0.53	0.28	0.18	0.11	0.29	-0.44	-0.73	-0.35	-0.32	-0.06	-0.58	1.44	1.06	0.81	1.33	-0.27	-0.46	0.52	-1.5	-2.75	-3.21	0.23	0.37	-1.73	-0.96	-0.55	-0.83	-0.27	0.04	-0.7	-0.68
Smo267677	-0.33	-0.14	-0.14	0.05	-0.03	0.04	-0.05	-0.24	0.01	0.07	-0.17	-0.12	0.82	1.04	0.65	0.74	-0.11	-0.22	0.12	-0.59	-0.6	-0.78	0.46	0.66	0.08	-0.5	-1.21	-0.91	-0.05	0.09	-0.71	-0.94
Smo270987	-0.37	-0.69	-0.61	-0.5	-0.29	-0.32	-0.38	-0.36	-0.3	-0.32	-0.33	-0.6	1.14	1.23	-0.29	1.51	-0.34	-0.29	0.74	-0.88	-0.63	-1.55	0.36	0.62	-0.22	0.42	-0.53	-0.11	0.01	0.28	-0.74	-0.93
Smo271829	-0.09	-0.05	-0.06	-0.14	-0.5	-0.17	-0.29	-0.11	0.03	0.08	0.09	-0.03	0.69	0.65	0.44	0.64	-0.46	0.46	0.53	-0.22	-0.58	-0.47	0.76	0.78	-1.62	-0.79	-1.08	-1.15	-0.07	-0.11	-0.27	-0.1
Smo272030	-1.04	-0.51	-0.41	-0.49	-0.21	-0.26	-0.41	-0.61	-0.6	-0.75	-0.77	-1.02	0.42	0.97	0.92	1.66	-0.93	-0.27	0.85	-2.59	-2.4	-0.08	0.45	1.29	-0.19	0.02	0.19	0.58	-0.73	-0.18	-0.87	-0.42
Smo402807	-0.78	-0.39	-0.65	-0.59	-0.57	-0.66	-1.04	-0.9	-0.95	-0.52	-0.79	-0.83	1.83	1.3	-2.34	1.51	-0.1	-0.2	-0.77	-9.24	-2.41	-4.64	1.24	1.56	0.51	-0.15	-0.85	-0.5	0.07	0.01	0.1	-0.07
Smo403167	-0.26	-0.4	-0.18	-0.62	0.39	-0.24	-0.9	-1.59	-0.98	-0.82	-0.58	-0.75	2.39	0.7	-0.77	1.93	-1.59	-1.07	-0.97	-4.81	-3.56	-	0.61	1.59	0.62	-0.27	0.05	-0.46	-0.84	-0.77	-0.96	-0.97
Smo403606	-1.38	-0.9	-0.79	-0.95	-1.11	-1.57	-1.98	-1.27	-2.02	-1.62	-1.07	-1.25	2.58	0.65	-1.95	2.19	-2.04	0.86	1.78	-	-0.73	-	0.07	0.89	0.08	-0.21	-0.46	-0.18	-0.88	-0.28	-1.25	-1.41
Smo405850	-2.03	-	-	-	-	-	-0.65	-	-	-	0.67	-	-23.18	-	-	-18.59	1.59	-	2.12	-	-	-	-	3.69	-	-	-	-	-7.58	1.06	2.36	1.06
Smo407501	-0.61	-0.2	-0.36	-0.38	-0.16	-0.46	-0.35	-0.48	-0.32	-0.55	-0.66	-0.69	1.0	1.53	1.18	1.62	-0.32	-2.69	1.32	-	-	-	0.72	0.84	-0.68	-0.68	-0.55	0.11	-0.42	-0.28	-0.68	-0.5
Smo407513	-1.22	-2.92	-1.6	-0.49	-1.66	0.16	-0.27	-0.19	-0.06	-0.3	-1.01	-0.97	2.26	0.77	0.55	1.96	-1.74	-0.75	-1.22	-5.99	-3.88	-3.63	0.72	2.17	-1.46	-1.11	0.08	-1.05	-0.45	0.06	-1.18	-1.36
Smo409203	0.59	0.67	0.38	0.06	-0.08	-0.19	-0.39	-0.78	-0.63	-0.77	-0.46	-0.42	0.67	0.88	0.82	1.02	0.38	0.79	-0.31	-1.52	-0.98	-3.75	0.5	0.3	-2.14	-1.49	-0.85	-1.06	0.03	0.11	0.4	0.01
Smo413248	-0.51	-0.32	-0.7	-0.65	-0.04	-0.5	-0.84	-0.73	-0.23	-0.92	-0.59	-0.79	0.26	1.43	0.93	0.62	-0.48	-0.27	1.05	-1.28	-0.47	-1.24	0.18	0.93	-0.92	0.16	0.59	0.69	-0.41	-0.12	-0.46	0.07
Smo415314	-0.33	-0.29	-0.07	0.06	0.26	0.35	0.11	0.13	0.13	0.2	-0.04	-0.25	0.85	0.35	-0.19	1.05	-0.57	-0.74	0.16	-0.87	-1.88	0.06	0.37	0.91	-0.51	-0.65	-0.51	-0.37	0.23	0.21	-0.94	-0.85
Smo418098	-1.5	-1.51	-1.49	-1.52	-1.64	-1.39	-1.58	-1.48	-1.19	-1.26	-1.51	-1.45	0.28	0.9	0.06	1.54	-0.8	-0.34	1.58	-0.0	-0.51	-0.34	0.93	1.8	-1.35	0.83	0.58	0.22	-0.25	-0.01	-0.35	-0.13
Smo420762	-0.11	0.06	0.03	-0.06	-0.12	-0.16	-0.35	-0.19	-0.05	-0.03	-0.2	-0.19	1.12	1.1	0.84	1.25	-0.51	-0.4	0.17	-3.57	-2.12	-	0.14	0.16	0.45	-0.22	-0.06	0.1	-0.26	-0.03	-0.89	-0.61
Smo422925	-1.03	-1.7	-4.87	-1.61	-1.22	-1.19	-1.46	-0.92	-1.58	-1.63	-1.06	-0.67	2.29	-0.71	-0.76	2.48	-1.82	-0.13	0.77	-4.8	-	1.16	0.6	1.0	-0.26	0.69	0.12	0.48	-0.78	-0.79	-0.97	-1.61
Smo423261	-	-	-	-0.79	-	-	-0.42	-0.57	-	-	-	0.57	-0.15	1.13	-	1.03	-0.15	-	2.31	-	-	-	1.1	2.91	-	0.73	1.14	-	0.68	-0.26	-0.29	-0.37
Smo429990	-2.41	-	-0.6	-1.46	-	-2.29	-1.37	0.46	-	-	-2.11	-2.31	0.99	0.48	-	1.65	-2.03	-0.8	2.23	-	1.11	-	1.28	1.59	-	0.51	1.18	1.04	-	-2.15	1.33	-2.02
Smo430064	-0.84	-0.48	-0.69	-0.62	-0.16	-0.32	-0.48	-0.71	-0.28	-0.38	-0.4	-0.67	1.47	1.2	1.28	1.53	-1.31	-1.21	0.83	-2.83	-1.26	-1.47	0.76	1.24	0.28	-0.76	-0.69	-0.99	-0.69	-0.33	-0.94	-0.76
Smo431284	-0.41	0.02	0.17	0.15	0.13	0.7	-0.17	-0.43	-1.3	-0.51	-0.53	-1.33	1.14	1.2	-0.35	0.63	-0.1	0.03	0.9	-3.15	-0.19	-2.56	1.21	1.14	-0.57	-1.47	-0.67	-0.6	-0.83	-0.57	-0.71	-0.08
Smo437746	-0.41	-0.5	-0.29	-0.19	0.23	0.37	0.44	0.15	-0.67	-0.66	-0.87	-0.89	0.66	1.35	0.62	1.42	0.21	-0.81	0.16	-2.83	-2.02	-1.66	0.41	0.71	-0.77	-0.65	-0.16	-0.13	-0.04	0.05	0.01	-0.59
Smo438803	0.32	0.41	-0.08	0.28	-0.02	0.08	-0.24	-0.17	-0.3	0.02	-0.01	-0.03	1.59	1.08	-1.09	1.4	-1.8	-1.49	-0.45	-6.59	-1.52	-8.19	0.27	0.77	0.1	-0.35	-0.41	-0.61	-1.47	-1.38	0.71	0.22
Smo441866	-2.47	-1.82	-1.48	-1.53	-1.77	-1.75	-1.83	-2.01	-1.78	-0.96	-3.39	-2.77	1.22	2.25	1.39	2.69	-1.61	-3.61	-1.73	-	-	-	1.24	2.08	-3.33	-3.31	-1.24	-0.62	-0.07	0.87	-0.91	-0.65
Smo444078	-0.56	-0.34	-0.22	-0.4	-0.48	-0.37	-0.57	-0.7	-0.44	-0.56	-0.38	-0.55	1.2	0.77	0.97	1.33	-0.14	-0.43	1.05	-0.94	-1.72	-0.94	0.73	1.03	-0.73	-0.05	-0.68	-0.46	-0.18	0.0	-0.71	-0.75
Smo444096	-1.63	-0.92	-0.75	-0.38	-0.07	-0.09	0.09	-0.47	-0.89	-0.96	-1.44	-1.72	1.76	1.75	-1.83	1.65	-0.17	-0.34	0.62	-3.93	-0.35	-3.94	1.16	0.88	0.42	-0.41	-0.25	0.02	-0.68	-0.65	-1.57	-1.08
Smo447120	0.12	0.05	-0.12	-0.11	0.22	0.14	-0.9	-1.21	-1.27	-1.58	-1.65	-1.65	-1.21	1.4	-0.24	-0.03	0.43	-0.22	1.1	-1.51	-0.32	-5.3	0.77	1.55	-0.42	-0.99	0.81	0.51	-0.55	0.12	0.44	-0.32
Smo6079	-1.53	-0.65	-0.37	0.84	0.64	1.14	-0.32	0.41	-0.95	-0.27	-0.94	-1.31	1.22	-0.76	0.32	1.98	-1.56	-0.99	-0.96	-	-	-	1.42	1.96	-2.52	-1.94	-1.73	-3.15	0.56	-0.83	-0.41	-0.69
Smo60947	-1.03	-0.95	-0.75	-0.72	-0.47	-0.74	-1.54	-1.03	-1.29	-0.83	-0.85	-1.33	2.32	1.5	1.47	2.11	-3.41	-2.21	-2.29	-4.81	-0.92	-2.29	0.49	1.91	-0.52	-0.05	-0.68	-0.17	-1.82	-0.81	-2.86	-2.38
Smo61564	-0.14	0.01	-0.32	-0.31	-0.19	-0.3	-0.49	-0.97	-0.53	-0.72	-0.84	-1.01	1.05	1.33	0.23	1.61	-0.04	-0.48	0.81	-3.88	-3.19	-2.53	0.96	1.27	-1.32	-1.19	-0.14	-0.42	-0.12	-0.01	0.13	-0.36
Smo63103	-0.84	-1.69	-1.35	-1.25	-1.23	-0.71	-1.81	-1.55	-0.63	-0.46	-0.45	-1.29	1.78	2.29	1.86	1.85	-1.28	-0.2	1.22	-7.02	-	-5.66	-0.22	0.52	-3.73	-0.23	-0.69	-0.81	-0.64	-0.75	-0.9	-0.43
Smo67310	-1.03	-0.95	-0.82	-0.47	-0.54	-0.02	0.06	0.0	-0.26	-0.3	-0.8	-0.76	1.55	0.01	1.21	0.78	-0.54	0.19	0.32	-1.29	-2.1	-2.79	0.35	0.76	0.5	-0.05	0.43	0.79	-0.1	0.13	-1.16	-1.18
Smo72200	-1.36	-1.77	-1.78	-1.49	-1.56	-0.63	-0.83	-0.97	-0.49	-0.39	-1.13	-1.21	2.18	1.12	1.02	2.0	-2.08	-1.16	-1.56	-6.12	-5.98	0.54	0.49	2.08	-0.7	-0.72	-0.02	0.05	-0.81	-0.39	-1.36	-1.41
Smo76878	-1.56	-1.15	-0.86	-0.73	-0.37	-0.31	-0.53	-0.63	-0.82	-0.81	-1.1	-1.25	1.48	0.46	0.76	1.48	-0.67	-0.28	0.52	-1.02	-1.99	-0.13	0.6	1.14	0.41	0.08	0.66	0.69	-0.6	-0.21	-0.96	-0.71
Smo77084	-1.14	-0.92	-1.04	-0.42	-0.44	-0.07	0.21	0.24	-0.17	-0.36	-0.52	-0.86	0.4	1.09	1.31	0.33	-0.43	-0.62	0.87	-0.76	-1.59	-2.96	0.08	0.4	0.85	-0.1	0.53	0.24	0.05	0.42	-0.55	-0.79
Smo77656	-1.37	-0.64	-2.43	-1.78	-	-0.36	-0.43	-0.4	-3.67	-0.8	-1.48	-0.78	1.46	1.35	2.02	2.21	0.9	-1.46	1.02	-	-2.25	-	0.97	1.12	-	-	-	-	0.54	0.4	-0.45	-0.84
Smo80851	-0.44	-0.54	-0.4	-0.16	-0.15	-0.06	0.06	-0.04	0.25	0.14	-0.14	-0.12	0.71	1.31	1.02	0.8	-0.05	-0.72	0.55	-0.9	-2.11	-2.04	-0.07	0.1	0.25	0.02	-0.69	0.17	0.11	0.41	-1.16	-2.6
Smo85303	-0.68	-0.65	-0.54	-0.63	-0.72	-0.56	-0.66	-0.57	-0.55	-0.69	-0.64	-0.81	0.77	1.45	0.56	0.98	-0.74	-1.34	0.83	0.27	-1.02	0.34	0.46	1.33	-1.04	0.23	0.36	0.32	-0.68	-0.47	-0.86	-0.52
Smo90651	-2.44	-1.51	-1.28	0.56	-	-0.83	1.59	0.2	0.64	-1.6	-1.18	-0.69	-2.09	-	-3.6	2.26	-1.32	-0.47	0.88	-	-	-	1.98	2.39	-	-0.25	-1.67	-	0.38	0.37	-0.6	-1.98
Smo96390	-1.39	-0.88	-0.68	-0.54	0.03	-0.96	-1.29	-0.99	-1.37	-1.44	-0.76	-2.1	1.27	1.93	1.75	1.71	-0.73	-2.21	1.04	-	-	-	-0.66	-0.95	0.39	-0.09	0.17	0.19	-0.11	0.22	0.0	0.31

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.