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Heatmap: Cluster_181 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
22.61 27.24 34.38 36.84 47.1 51.02 73.88 72.9 63.76 59.57 41.35 36.16 36.9 18.37 53.81 32.47 41.53 34.66 41.3 5.94 24.93 8.66 39.29 38.27 20.63 80.34 135.48 140.64 45.92 50.62 25.61 26.25
42.64 45.17 44.8 47.15 48.15 46.06 44.95 50.03 43.99 43.95 42.98 38.07 34.24 28.24 31.39 40.21 27.68 23.46 46.15 18.59 4.82 7.21 31.19 31.22 22.75 84.83 92.28 98.57 33.13 33.39 27.63 28.65
5.83 4.66 6.59 7.11 7.79 9.6 7.24 10.81 10.29 5.95 6.61 5.0 7.98 13.67 3.92 9.97 4.76 6.88 8.3 0.09 0.75 1.82 4.0 4.71 3.96 27.69 38.76 36.34 5.94 4.33 3.78 7.61
5.18 7.02 6.07 8.47 9.6 9.69 8.67 9.53 6.24 8.45 6.12 5.78 7.47 3.14 5.11 7.0 3.57 2.43 9.11 0.0 0.0 0.0 5.3 5.82 1.05 16.55 20.37 14.58 5.01 4.69 4.09 4.88
16.33 14.58 14.81 20.27 26.27 26.32 19.34 28.69 18.14 23.0 17.39 16.46 9.21 7.06 1.04 9.63 3.55 2.42 9.69 1.12 4.97 1.06 8.72 8.91 7.44 53.97 64.05 49.56 3.95 3.53 5.84 8.12
17.07 17.89 17.53 22.38 23.68 25.5 26.13 25.46 22.57 20.11 16.47 14.69 17.14 17.71 24.02 18.74 17.66 16.28 24.26 1.75 12.08 3.03 17.33 17.57 15.41 29.05 39.74 41.05 16.26 16.91 11.83 11.89
22.2 23.42 20.47 26.38 32.44 30.73 27.04 32.41 26.18 25.17 22.17 20.16 16.73 12.97 26.19 20.69 18.78 10.96 27.83 0.0 0.23 0.0 18.93 18.24 3.71 46.58 46.5 52.95 23.35 24.12 12.11 12.4
16.64 17.86 15.99 18.33 22.0 21.28 24.3 26.25 21.7 21.18 19.66 18.4 11.8 17.59 19.98 14.48 10.85 10.22 21.79 2.18 1.99 11.75 12.66 13.36 5.89 33.85 50.54 47.61 13.55 14.57 19.0 21.43
69.22 62.77 65.06 74.9 95.11 96.26 101.42 106.4 100.66 90.67 87.46 68.87 60.37 69.63 66.53 76.16 88.11 81.53 82.3 42.81 50.22 15.57 86.01 77.59 70.92 140.64 195.55 228.39 90.56 92.52 65.44 63.61
82.32 96.97 93.54 110.3 124.43 129.05 127.3 130.71 108.87 98.88 93.52 81.05 55.87 62.4 54.01 63.33 68.03 48.33 71.63 9.57 58.5 1.68 67.8 64.38 98.65 162.26 317.32 277.31 62.92 66.58 69.48 73.65
24.57 29.71 31.29 40.23 44.2 45.57 37.21 39.01 30.36 27.28 22.08 20.48 22.26 23.36 33.93 23.33 19.57 7.13 22.82 9.66 6.13 3.23 20.38 18.52 15.37 57.94 67.98 65.99 15.33 16.43 12.76 11.36
36.73 42.05 39.31 46.21 48.77 49.19 54.97 51.12 44.54 43.04 41.19 36.97 37.57 23.92 42.78 44.28 26.95 19.31 40.75 13.2 8.29 14.43 29.88 29.32 26.8 74.51 92.28 99.72 29.12 31.01 24.29 22.14
12.1 10.42 12.4 15.92 17.22 15.98 15.3 15.92 13.86 13.77 10.54 10.9 11.34 9.84 13.54 14.22 12.06 6.6 15.28 0.35 10.3 1.28 9.92 9.69 9.65 24.81 39.27 36.51 11.9 12.29 8.46 8.48
16.49 20.22 24.53 25.13 27.08 26.38 16.94 22.76 19.14 18.43 19.64 18.85 23.81 15.04 27.37 18.26 8.69 8.24 8.18 0.0 0.24 0.28 13.76 15.47 6.27 46.56 60.15 60.72 7.75 8.15 7.59 9.62
14.15 16.31 16.27 16.47 18.44 17.68 17.85 18.57 15.72 15.77 14.06 13.31 13.9 10.6 15.72 15.77 12.33 8.02 17.89 0.0 0.0 0.0 12.39 12.64 2.98 30.57 34.89 38.12 13.05 13.26 8.96 9.12
94.22 95.12 109.33 112.15 112.9 108.76 119.12 134.11 133.25 128.19 129.46 108.05 126.26 100.41 98.34 103.91 105.91 98.8 96.86 36.0 41.59 35.37 90.62 82.7 46.3 164.88 235.5 255.17 106.28 107.68 105.25 135.35
1.87 2.04 2.7 2.55 2.54 2.35 3.33 3.83 2.9 3.55 3.82 3.04 4.96 1.18 0.76 1.58 1.83 2.47 1.83 0.0 0.07 0.0 2.63 2.98 4.2 4.39 6.74 7.21 2.07 1.8 1.21 1.2
6.58 5.03 5.77 4.36 6.43 5.97 5.38 6.82 6.17 6.07 7.62 6.27 4.34 3.98 3.29 3.95 2.81 1.65 3.44 0.77 0.22 0.04 3.5 3.29 2.07 8.55 11.26 11.7 4.0 3.65 4.6 4.53
21.84 18.16 21.56 22.6 23.79 24.58 24.53 25.06 23.32 23.05 22.95 19.41 28.33 27.74 29.48 21.67 13.41 11.45 19.99 7.75 1.42 1.36 17.46 17.41 12.61 44.76 52.24 46.97 12.89 13.31 13.47 13.53
9.17 10.09 8.36 9.46 10.15 11.05 12.19 9.86 8.65 8.41 8.36 7.08 7.58 4.56 12.23 8.11 5.1 6.23 8.97 0.91 0.42 2.17 5.4 5.38 3.42 16.84 26.19 24.87 5.12 5.2 4.66 4.28
1.03 0.67 0.36 0.76 1.9 1.64 1.97 2.37 1.62 1.5 1.5 0.93 0.36 0.27 0.23 0.44 0.25 0.72 0.83 0.0 0.0 0.0 0.68 0.69 0.8 3.3 6.33 6.82 0.78 0.49 0.52 0.41
47.54 53.24 59.0 63.92 74.2 72.07 63.79 61.84 52.46 47.21 46.2 39.87 43.42 35.53 49.86 50.21 39.73 21.48 55.85 15.96 9.68 9.86 44.2 39.45 29.05 76.18 104.53 112.83 40.27 42.49 32.12 33.04
15.51 16.06 14.02 15.08 14.27 11.48 14.09 15.51 14.7 13.8 12.69 15.56 4.07 4.75 6.6 6.79 4.45 3.09 8.9 0.39 0.24 0.0 5.01 4.44 2.57 21.2 32.76 31.06 6.32 6.59 8.7 7.64
9.39 9.43 9.89 11.21 12.51 10.39 10.2 11.92 12.16 10.88 10.6 8.85 6.92 5.09 7.23 7.62 4.17 2.81 5.15 0.12 0.42 0.81 6.56 7.43 0.67 15.03 19.88 17.35 4.39 4.91 4.2 5.4
23.18 21.13 24.08 27.56 29.06 30.24 31.92 34.76 33.59 30.95 26.31 22.76 27.09 21.73 45.56 20.91 14.8 11.6 20.03 8.33 4.2 7.76 17.79 20.31 8.62 57.42 76.81 68.64 15.13 16.71 19.74 20.81
13.16 14.41 15.59 16.77 15.45 16.0 17.62 21.02 16.47 15.29 19.1 14.98 8.35 12.76 17.14 9.47 11.86 10.98 10.35 1.93 3.98 3.87 11.81 10.47 3.25 23.66 33.06 31.07 10.34 10.18 11.72 11.78
15.22 16.08 12.9 17.38 21.97 18.1 17.77 24.4 22.58 18.9 18.49 16.88 10.06 8.53 7.92 11.65 9.93 1.03 8.53 4.41 1.95 14.63 12.56 12.79 10.45 54.6 58.75 42.83 10.37 9.41 11.2 11.29
26.47 30.7 30.94 30.03 32.4 29.68 27.98 25.95 25.94 26.0 25.94 22.68 25.5 26.0 32.67 30.78 20.36 15.84 29.95 20.45 9.95 4.83 24.37 25.01 19.97 45.95 56.94 59.71 19.72 22.58 22.7 23.92
9.95 10.56 10.51 12.56 13.46 14.05 16.4 20.05 13.6 13.47 12.6 11.05 14.25 8.19 2.84 11.23 8.85 9.63 13.82 0.12 2.05 0.04 12.98 15.04 14.75 16.76 37.14 37.91 9.38 9.86 7.5 6.47
8.0 7.8 7.75 8.04 7.32 7.94 7.52 8.27 8.42 7.9 7.25 6.71 4.48 2.93 10.2 4.68 4.99 3.18 6.74 0.02 0.76 1.39 3.96 3.08 0.57 13.76 12.07 15.87 6.3 5.73 4.67 4.23
67.99 64.56 65.69 71.36 77.87 75.35 71.9 61.98 53.28 52.65 50.38 47.99 38.84 43.08 50.94 43.97 49.46 37.75 58.72 5.67 11.17 10.96 43.7 38.41 26.66 73.37 138.11 140.69 39.52 43.38 39.6 42.51
12.67 15.16 14.37 13.62 12.24 13.31 11.56 10.97 11.8 11.3 13.69 9.76 7.9 3.63 12.85 7.88 8.49 9.78 8.75 0.55 0.06 2.17 9.01 10.81 6.42 17.8 30.6 28.2 7.58 6.65 8.87 8.85
10.12 13.14 11.64 11.22 14.89 10.77 13.53 12.03 11.01 11.53 11.74 8.94 9.02 7.92 9.14 12.17 7.5 4.15 10.89 0.0 0.32 0.41 8.91 9.72 4.29 23.6 28.6 31.79 8.4 8.83 4.24 4.83
12.77 14.68 15.17 13.84 17.51 20.43 20.23 21.77 16.46 17.83 14.5 13.38 10.9 8.67 7.15 12.55 6.59 7.97 17.87 5.38 1.97 0.66 7.7 8.03 9.42 27.83 44.9 33.57 7.92 8.3 10.8 18.52
83.86 77.05 84.19 89.38 88.36 90.99 92.18 105.58 102.57 96.78 99.0 82.83 52.31 70.1 87.71 47.44 55.59 49.58 52.87 10.58 17.84 15.76 56.16 65.1 26.75 133.11 254.68 221.32 51.91 57.44 87.27 107.04
11.6 12.48 11.68 15.67 16.77 15.75 16.2 17.46 16.67 14.83 14.42 12.58 13.48 7.84 10.82 13.59 9.06 5.21 11.94 4.0 0.83 1.95 10.65 10.73 6.7 21.63 28.31 28.88 9.89 10.14 7.04 6.91
68.11 101.57 100.83 127.57 161.16 169.84 137.83 114.86 81.72 74.83 68.45 59.16 52.36 87.08 46.3 89.77 113.37 60.2 126.36 12.57 15.02 11.59 125.6 114.5 22.4 197.95 288.97 323.72 99.13 99.64 55.35 52.01
18.24 20.26 20.42 20.09 25.88 25.29 20.78 21.52 17.59 16.25 14.8 13.28 10.31 11.75 20.04 14.3 12.01 11.46 15.35 5.36 3.18 1.2 11.82 11.62 2.71 20.17 35.07 38.9 10.12 10.82 10.4 10.07
19.65 18.89 19.22 22.7 27.54 27.12 26.73 29.19 24.32 22.78 22.07 16.42 21.65 10.69 26.34 21.88 15.87 18.71 23.65 0.83 6.43 4.33 21.68 24.04 12.16 42.78 53.63 47.9 19.43 20.08 16.67 15.48
13.68 14.87 15.57 20.67 25.23 24.58 22.44 23.89 16.82 15.7 14.32 13.87 12.61 13.12 18.76 15.03 12.32 7.21 15.49 7.96 4.25 3.08 16.9 15.5 11.78 31.14 46.18 45.78 11.03 12.67 11.63 12.77
26.11 23.54 22.18 30.05 29.14 30.63 29.75 33.49 30.06 28.39 29.69 24.78 22.67 16.67 27.95 23.82 20.84 12.23 29.7 12.18 7.1 6.18 23.45 26.04 28.87 56.83 65.66 58.95 21.15 23.16 22.36 21.05
51.16 42.28 38.66 36.72 42.08 39.53 43.38 49.29 51.34 49.79 55.4 52.62 30.85 33.43 22.64 38.91 34.23 23.27 55.07 8.47 7.83 2.97 42.18 37.42 20.09 70.41 72.33 79.31 39.8 39.86 31.36 34.96
35.04 36.3 36.63 35.86 34.08 38.19 36.71 37.69 34.31 33.41 31.97 30.12 28.31 28.25 42.01 30.71 21.36 12.44 32.28 8.52 16.35 5.58 25.98 25.13 24.48 64.3 87.04 86.35 21.46 21.88 24.32 25.56
35.96 42.58 41.19 47.15 53.39 48.49 41.74 42.47 39.24 37.32 35.29 31.55 48.92 65.6 46.54 47.65 26.52 27.55 40.53 2.1 13.55 16.19 36.58 33.97 29.44 99.64 116.67 121.7 27.31 26.27 26.2 29.72
106.2 104.81 103.44 107.88 114.21 109.12 106.56 101.72 96.83 104.98 95.93 95.28 85.71 86.79 138.28 89.08 61.73 49.76 86.88 84.14 39.4 44.25 64.97 67.44 81.23 168.83 186.83 188.59 62.02 64.64 79.61 83.96
28.03 29.19 29.25 37.84 41.71 36.92 36.27 41.13 36.86 31.93 30.3 28.11 23.85 26.95 32.58 26.55 15.72 14.89 25.18 6.47 3.92 7.17 21.18 21.64 18.29 55.26 61.6 49.81 16.77 19.84 25.39 31.78
26.41 25.11 25.4 24.88 25.44 29.36 27.86 31.23 30.22 26.49 23.48 22.62 23.17 28.66 27.04 23.32 17.09 17.69 23.62 13.7 15.26 10.39 22.24 22.6 15.29 41.88 70.34 68.51 16.36 18.04 23.32 26.1
21.95 20.27 20.68 20.76 21.24 20.4 19.43 24.46 23.2 20.79 21.56 18.29 10.8 11.1 11.5 14.51 17.17 10.29 18.97 0.27 0.69 0.54 15.19 15.02 10.44 40.17 47.97 45.64 16.64 15.94 17.29 22.91
64.8 58.98 62.0 71.46 82.72 73.24 79.2 88.47 85.74 78.46 76.45 69.33 43.77 33.56 28.11 53.8 61.26 55.98 114.88 2.43 14.35 2.64 61.88 58.58 24.42 170.07 158.63 169.77 79.89 78.18 74.18 77.42
7.11 9.1 10.51 12.34 12.91 13.92 12.11 14.32 12.12 10.12 9.24 7.45 9.26 8.27 7.78 14.73 9.03 4.73 18.09 0.0 0.23 0.0 8.66 8.12 1.83 25.61 29.28 31.58 10.14 10.47 8.7 9.64
100.23 126.49 148.66 156.03 172.27 188.61 140.4 138.64 103.38 94.21 93.22 77.83 93.35 91.46 157.56 105.63 101.15 81.37 136.43 23.25 26.6 9.82 103.53 101.03 65.88 270.86 426.09 458.68 77.46 83.42 88.94 93.91
38.63 31.36 31.47 33.59 34.79 34.1 32.69 41.58 44.25 40.85 42.43 35.8 27.73 21.61 16.47 25.21 32.35 21.38 39.81 1.33 1.62 0.55 27.46 25.09 6.78 76.07 74.81 85.73 37.77 40.65 16.24 16.85
43.08 44.05 46.3 57.7 63.5 66.27 65.25 72.66 64.45 53.58 49.34 45.62 38.12 33.29 49.09 41.68 41.03 22.28 45.7 14.97 8.86 15.72 40.07 42.36 83.2 99.92 131.8 137.37 39.96 42.91 35.97 33.5
28.25 30.49 33.65 37.62 35.51 37.13 32.49 32.78 28.92 29.14 30.98 25.98 24.34 22.76 27.64 27.71 22.78 14.54 28.36 7.8 3.12 13.56 23.95 25.15 19.52 64.89 77.46 82.46 22.97 23.51 19.94 20.87
16.27 18.45 18.96 19.88 20.66 19.56 18.75 19.73 13.84 16.04 15.1 12.73 10.57 11.96 14.22 15.15 16.62 11.74 20.91 4.88 5.84 1.75 18.2 15.09 11.31 26.93 32.02 36.7 14.48 15.05 12.3 12.27

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)